RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 AMNQ9BXJ7 453 aa17.99■□□□□ 0.47
SUPT16H-205ENST00000556217 KRT23Q9C075 422 aa17.99■□□□□ 0.47
SUPT16H-205ENST00000556217 JMJD4Q9H9V9 463 aa17.99■□□□□ 0.47
SUPT16H-205ENST00000556217 MAP3K20Q9NYL2 800 aaKnown RBP17.99■□□□□ 0.47
SUPT16H-205ENST00000556217 EMSYQ7Z589 1322 aa17.98■□□□□ 0.47
SUPT16H-205ENST00000556217 ZNF286BP0CG31 522 aa17.98■□□□□ 0.47
SUPT16H-205ENST00000556217 CWC27Q6UX04 472 aaKnown RBP17.98■□□□□ 0.47
SUPT16H-205ENST00000556217 TMCO2Q7Z6W1 182 aaPredicted RBP17.98■□□□□ 0.47
SUPT16H-205ENST00000556217 GDPD5Q8WTR4 605 aa17.98■□□□□ 0.47
SUPT16H-205ENST00000556217 SNX27Q96L92 541 aa17.98■□□□□ 0.47
SUPT16H-205ENST00000556217 CNNM2Q9H8M5 875 aa17.98■□□□□ 0.47
SUPT16H-205ENST00000556217 CD320Q9NPF0 282 aa17.98■□□□□ 0.47
SUPT16H-205ENST00000556217 ZSWIM5Q9P217 1185 aa17.98■□□□□ 0.47
SUPT16H-205ENST00000556217 CTNNA3Q9UI47 895 aa17.98■□□□□ 0.47
SUPT16H-205ENST00000556217 HAS3O00219 553 aa17.97■□□□□ 0.47
SUPT16H-205ENST00000556217 PPFIA4O75335 1185 aa17.97■□□□□ 0.47
SUPT16H-205ENST00000556217 HSD17B4P51659 736 aa17.97■□□□□ 0.47
SUPT16H-205ENST00000556217 ERVK-21P61565 698 aa17.97■□□□□ 0.47
SUPT16H-205ENST00000556217 AAMPQ13685 434 aa17.97■□□□□ 0.47
SUPT16H-205ENST00000556217 SPRED2Q7Z698 418 aa17.97■□□□□ 0.47
SUPT16H-205ENST00000556217 SAMD3Q8N6K7 520 aa17.97■□□□□ 0.47
SUPT16H-205ENST00000556217 DSCC1Q9BVC3 393 aa17.97■□□□□ 0.47
SUPT16H-205ENST00000556217 MTUS1Q9ULD2 1270 aa17.97■□□□□ 0.47
SUPT16H-205ENST00000556217 LINC01553A4QN01 128 aa17.96■□□□□ 0.47
SUPT16H-205ENST00000556217 LGR5O75473 907 aa17.96■□□□□ 0.47
SUPT16H-205ENST00000556217 MYCLP12524 364 aaPredicted RBP17.96■□□□□ 0.47
SUPT16H-205ENST00000556217 HOXD8P13378 290 aaPredicted RBP17.96■□□□□ 0.47
SUPT16H-205ENST00000556217 GHRHRQ02643 423 aa17.96■□□□□ 0.47
SUPT16H-205ENST00000556217 TRAF1Q13077 416 aa17.96■□□□□ 0.47
SUPT16H-205ENST00000556217 IFIT1BQ5T764 474 aaKnown RBP17.96■□□□□ 0.47
SUPT16H-205ENST00000556217 ZNF618Q5T7W0 954 aa17.96■□□□□ 0.47
SUPT16H-205ENST00000556217 GJD3Q8N144 294 aa17.96■□□□□ 0.47
SUPT16H-205ENST00000556217 SPATA33Q96N06 139 aa17.96■□□□□ 0.47
SUPT16H-205ENST00000556217 UIMC1Q96RL1 719 aa17.96■□□□□ 0.47
SUPT16H-205ENST00000556217 RWDD1Q9H446 243 aaPredicted RBP17.96■□□□□ 0.47
SUPT16H-205ENST00000556217 SUGCTQ9HAC7 445 aa17.96■□□□□ 0.47
SUPT16H-205ENST00000556217 INSL6Q9Y581 213 aa17.96■□□□□ 0.47
SUPT16H-205ENST00000556217 MICAL3Q7RTP6 2002 aa17.96■□□□□ 0.47
SUPT16H-205ENST00000556217 AMHP03971 560 aa17.95■□□□□ 0.46
SUPT16H-205ENST00000556217 TGFB3P10600 412 aa17.95■□□□□ 0.46
SUPT16H-205ENST00000556217 ALADP13716 330 aa17.95■□□□□ 0.46
SUPT16H-205ENST00000556217 CSPP1Q1MSJ5 1256 aa17.95■□□□□ 0.46
SUPT16H-205ENST00000556217 TRIM71Q2Q1W2 868 aaKnown RBP17.95■□□□□ 0.46
SUPT16H-205ENST00000556217 CELF3Q5SZQ8 465 aaKnown RBP17.95■□□□□ 0.46
SUPT16H-205ENST00000556217 MYSM1Q5VVJ2 828 aa17.95■□□□□ 0.46
SUPT16H-205ENST00000556217 B4GALNT3Q6L9W6 998 aa17.95■□□□□ 0.46
SUPT16H-205ENST00000556217 FAM117BQ6P1L5 589 aa17.95■□□□□ 0.46
SUPT16H-205ENST00000556217 STOX1Q6ZVD7 989 aa17.95■□□□□ 0.46
SUPT16H-205ENST00000556217 PDCD2LQ9BRP1 358 aa17.95■□□□□ 0.46
SUPT16H-205ENST00000556217 OSBPL3Q9H4L5 887 aa17.95■□□□□ 0.46
SUPT16H-205ENST00000556217 PCDHA1Q9Y5I3 950 aa17.95■□□□□ 0.46
SUPT16H-205ENST00000556217 KLRF2D3W0D1 207 aa17.94■□□□□ 0.46
SUPT16H-205ENST00000556217 ZBTB5O15062 677 aa17.94■□□□□ 0.46
SUPT16H-205ENST00000556217 GGPS1O95749 300 aa17.94■□□□□ 0.46
SUPT16H-205ENST00000556217 TCTN1Q2MV58 587 aa17.94■□□□□ 0.46
SUPT16H-205ENST00000556217 TRAF7Q6Q0C0 670 aa17.94■□□□□ 0.46
SUPT16H-205ENST00000556217 CHD1LQ86WJ1 897 aa17.94■□□□□ 0.46
SUPT16H-205ENST00000556217 PLEKHM2Q8IWE5 1019 aa17.94■□□□□ 0.46
SUPT16H-205ENST00000556217 SMC5Q8IY18 1101 aa17.94■□□□□ 0.46
SUPT16H-205ENST00000556217 KCNH6Q9H252 994 aa17.94■□□□□ 0.46
SUPT16H-205ENST00000556217 RSPH10B2B2RC85 870 aa17.93■□□□□ 0.46
SUPT16H-205ENST00000556217 OPLAHO14841 1288 aa17.93■□□□□ 0.46
SUPT16H-205ENST00000556217 RSPH10BP0C881 870 aa17.93■□□□□ 0.46
SUPT16H-205ENST00000556217 CCND2P30279 289 aa17.93■□□□□ 0.46
SUPT16H-205ENST00000556217 THPOP40225 353 aa17.93■□□□□ 0.46
SUPT16H-205ENST00000556217 ZNF200P98182 395 aaPredicted RBP17.93■□□□□ 0.46
SUPT16H-205ENST00000556217 NHLH1Q02575 133 aa17.93■□□□□ 0.46
SUPT16H-205ENST00000556217 MBTPS1Q14703 1052 aa17.93■□□□□ 0.46
SUPT16H-205ENST00000556217 PGM5Q15124 567 aa17.93■□□□□ 0.46
SUPT16H-205ENST00000556217 HSDL1Q3SXM5 330 aa17.93■□□□□ 0.46
SUPT16H-205ENST00000556217 SERINC5Q86VE9 423 aa17.93■□□□□ 0.46
SUPT16H-205ENST00000556217 VSIG10LQ86VR7 867 aa17.93■□□□□ 0.46
SUPT16H-205ENST00000556217 FAM178BQ8IXR5 827 aa17.93■□□□□ 0.46
SUPT16H-205ENST00000556217 STAG2Q8N3U4 1231 aa17.93■□□□□ 0.46
SUPT16H-205ENST00000556217 FBXO22Q8NEZ5 403 aa17.93■□□□□ 0.46
SUPT16H-205ENST00000556217 WNT8BQ93098 351 aa17.93■□□□□ 0.46
SUPT16H-205ENST00000556217 UBE2ZQ9H832 354 aaPredicted RBP17.93■□□□□ 0.46
SUPT16H-205ENST00000556217 MLXIPQ9HAP2 919 aa17.93■□□□□ 0.46
SUPT16H-205ENST00000556217 C17orf102A2RUQ5 167 aa17.92■□□□□ 0.46
SUPT16H-205ENST00000556217 SORBS3O60504 671 aa17.92■□□□□ 0.46
SUPT16H-205ENST00000556217 RGS20O76081 388 aa17.92■□□□□ 0.46
SUPT16H-205ENST00000556217 UBA1P22314 1058 aaKnown RBP17.92■□□□□ 0.46
SUPT16H-205ENST00000556217 HOXA13P31271 388 aaPredicted RBP17.92■□□□□ 0.46
SUPT16H-205ENST00000556217 SSTR3P32745 418 aaPredicted RBP17.92■□□□□ 0.46
SUPT16H-205ENST00000556217 MTMR8Q96EF0 704 aa17.92■□□□□ 0.46
SUPT16H-205ENST00000556217 H3BRB1 525 aa17.91■□□□□ 0.46
SUPT16H-205ENST00000556217 GCOM1H8Y6P7 765 aaPredicted RBP17.91■□□□□ 0.46
SUPT16H-205ENST00000556217 POLR2MP0CAP2 368 aa17.91■□□□□ 0.46
SUPT16H-205ENST00000556217 NUCB1Q02818 461 aa17.91■□□□□ 0.46
SUPT16H-205ENST00000556217 PTPROQ16827 1216 aa17.91■□□□□ 0.46
SUPT16H-205ENST00000556217 LEXMQ3ZCV2 418 aa17.91■□□□□ 0.46
SUPT16H-205ENST00000556217 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.91■□□□□ 0.462e-6■■■■■ 46.3
SUPT16H-205ENST00000556217 MYOCDQ8IZQ8 938 aa17.91■□□□□ 0.46
SUPT16H-205ENST00000556217 DBF4BQ8NFT6 615 aa17.91■□□□□ 0.46
SUPT16H-205ENST00000556217 ATP6V0A1Q93050 837 aa17.91■□□□□ 0.46
SUPT16H-205ENST00000556217 SAMD11Q96NU1 681 aa17.91■□□□□ 0.46
SUPT16H-205ENST00000556217 C16orf70Q9BSU1 422 aa17.91■□□□□ 0.46
SUPT16H-205ENST00000556217 TUT1Q9H6E5 874 aaKnown RBP17.91■□□□□ 0.46
SUPT16H-205ENST00000556217 MAD2L2Q9UI95 211 aa17.91■□□□□ 0.46
SUPT16H-205ENST00000556217 BAZ2BQ9UIF8 2168 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms