RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 ATP1A1P05023 1023 aaKnown RBP16.37■□□□□ 0.21
NEK9-209ENST00000556170 PLEKP08567 350 aaPredicted RBP16.37■□□□□ 0.21
NEK9-209ENST00000556170 SETQ01105 290 aaPredicted RBP16.37■□□□□ 0.21
NEK9-209ENST00000556170 KCNB1Q14721 858 aa16.37■□□□□ 0.21
NEK9-209ENST00000556170 E2F4Q16254 413 aa16.37■□□□□ 0.21
NEK9-209ENST00000556170 ELOA2Q8IYF1 753 aaPredicted RBP16.37■□□□□ 0.21
NEK9-209ENST00000556170 TRIM58Q8NG06 486 aa16.37■□□□□ 0.21
NEK9-209ENST00000556170 MASTLQ96GX5 879 aa16.37■□□□□ 0.21
NEK9-209ENST00000556170 NUDT12Q9BQG2 462 aa16.37■□□□□ 0.21
NEK9-209ENST00000556170 MARF1Q9Y4F3 1742 aaKnown RBP16.37■□□□□ 0.21
NEK9-209ENST00000556170 EXOC3O60645 756 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 FTCDO95954 541 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 ABL1P00519 1130 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 ARHGAP4P98171 946 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 SH3RF1Q7Z6J0 888 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 ZNF185O15231 689 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 CEP104O60308 925 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 ECE2O60344 883 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 KRT13P13646 458 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 ZSCAN20P17040 1043 aaPredicted RBP16.36■□□□□ 0.21
NEK9-209ENST00000556170 CETN1Q12798 172 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 COASYQ13057 564 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 TUBB2AQ13885 445 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 TUBB2BQ9BVA1 445 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 TRIM31Q9BZY9 425 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 PCDHAC2Q9Y5I4 1007 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 GJA3Q9Y6H8 435 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 ALAS1P13196 640 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 PRPHP41219 470 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 GFPT1Q06210 699 aaPredicted RBP16.36■□□□□ 0.21
NEK9-209ENST00000556170 DDR1Q08345 913 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 WDR78Q5VTH9 848 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 CCDC151A5D8V7 595 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 RNF225M0QZC1 329 aaPredicted RBP16.36■□□□□ 0.21
NEK9-209ENST00000556170 TBX2Q13207 712 aaPredicted RBP16.36■□□□□ 0.21
NEK9-209ENST00000556170 NPY5RQ15761 445 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 TMC4Q7Z404 712 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 ZFPM1Q8IX07 1006 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 RABGAP1Q9Y3P9 1069 aa16.36■□□□□ 0.21
NEK9-209ENST00000556170 MORC2Q9Y6X9 1032 aaPredicted RBP16.36■□□□□ 0.21
NEK9-209ENST00000556170 TERF2Q15554 542 aa16.35■□□□□ 0.21
NEK9-209ENST00000556170 CC2D2BQ6DHV5 1058 aa16.35■□□□□ 0.21
NEK9-209ENST00000556170 C10orf67Q8IYJ2 551 aa16.35■□□□□ 0.21
NEK9-209ENST00000556170 SLFN12Q8IYM2 578 aa16.35■□□□□ 0.21
NEK9-209ENST00000556170 SH2D3AQ9BRG2 576 aa16.35■□□□□ 0.21
NEK9-209ENST00000556170 KBTBD4Q9NVX7 518 aa16.35■□□□□ 0.21
NEK9-209ENST00000556170 RGL1Q9NZL6 768 aa16.35■□□□□ 0.21
NEK9-209ENST00000556170 PCDHA13Q9Y5I0 950 aa16.35■□□□□ 0.21
NEK9-209ENST00000556170 ALS2Q96Q42 1657 aa16.35■□□□□ 0.21
NEK9-209ENST00000556170 VAV2P52735 878 aa16.35■□□□□ 0.21
NEK9-209ENST00000556170 SYDE2Q5VT97 1194 aa16.35■□□□□ 0.21
NEK9-209ENST00000556170 LRCH2Q5VUJ6 765 aa16.35■□□□□ 0.21
NEK9-209ENST00000556170 ADAT2Q7Z6V5 191 aaKnown RBP16.35■□□□□ 0.21
NEK9-209ENST00000556170 CRAMP1Q96RY5 1269 aa16.35■□□□□ 0.21
NEK9-209ENST00000556170 DHX36Q9H2U1 1008 aaKnown RBP16.35■□□□□ 0.21
NEK9-209ENST00000556170 FRMD4BQ9Y2L6 1034 aa16.35■□□□□ 0.21
NEK9-209ENST00000556170 CCDC169A6NNP5 214 aa16.35■□□□□ 0.21
NEK9-209ENST00000556170 NCK2O43639 380 aa16.35■□□□□ 0.21
NEK9-209ENST00000556170 HMGB2P26583 209 aaKnown RBP16.35■□□□□ 0.21
NEK9-209ENST00000556170 NAALADL2Q58DX5 795 aa16.35■□□□□ 0.21
NEK9-209ENST00000556170 PODNQ7Z5L7 613 aa16.35■□□□□ 0.21
NEK9-209ENST00000556170 RETREG2Q8NC44 543 aa16.35■□□□□ 0.21
NEK9-209ENST00000556170 NOA1Q8NC60 698 aaKnown RBP16.35■□□□□ 0.21
NEK9-209ENST00000556170 JDP2Q8WYK2 163 aa16.35■□□□□ 0.21
NEK9-209ENST00000556170 TNFRSF25Q93038 417 aa16.35■□□□□ 0.21
NEK9-209ENST00000556170 CAPN11Q9UMQ6 739 aa16.35■□□□□ 0.21
NEK9-209ENST00000556170 CALUO43852 315 aaPredicted RBP16.34■□□□□ 0.21
NEK9-209ENST00000556170 GCFC2P16383 781 aaKnown RBP16.34■□□□□ 0.21
NEK9-209ENST00000556170 BICD1Q96G01 975 aa16.34■□□□□ 0.21
NEK9-209ENST00000556170 ZEB2O60315 1214 aa16.34■□□□□ 0.21
NEK9-209ENST00000556170 GUCY2FP51841 1108 aa16.34■□□□□ 0.21
NEK9-209ENST00000556170 U2AF1L4Q8WU68 220 aaKnown RBP16.34■□□□□ 0.21
NEK9-209ENST00000556170 BCS1LQ9Y276 419 aa16.34■□□□□ 0.21
NEK9-209ENST00000556170 GCOM1H8Y6P7 765 aaPredicted RBP16.34■□□□□ 0.21
NEK9-209ENST00000556170 HSF2BPO75031 334 aa16.34■□□□□ 0.21
NEK9-209ENST00000556170 POLR2MP0CAP2 368 aa16.34■□□□□ 0.21
NEK9-209ENST00000556170 RHBDL3P58872 404 aa16.34■□□□□ 0.21
NEK9-209ENST00000556170 GRB10Q13322 594 aa16.34■□□□□ 0.21
NEK9-209ENST00000556170 EXOC3L4Q17RC7 722 aa16.34■□□□□ 0.21
NEK9-209ENST00000556170 TTI2Q6NXR4 508 aa16.34■□□□□ 0.21
NEK9-209ENST00000556170 SFR1Q86XK3 245 aa16.34■□□□□ 0.21
NEK9-209ENST00000556170 FAM178BQ8IXR5 827 aa16.34■□□□□ 0.21
NEK9-209ENST00000556170 RIC8AQ9NPQ8 531 aa16.34■□□□□ 0.21
NEK9-209ENST00000556170 SMARCAL1Q9NZC9 954 aa16.34■□□□□ 0.21
NEK9-209ENST00000556170 PHRF1Q9P1Y6 1649 aaKnown RBP16.33■□□□□ 0.21
NEK9-209ENST00000556170 VSNL1P62760 191 aa16.33■□□□□ 0.21
NEK9-209ENST00000556170 LLGL1Q15334 1064 aa16.33■□□□□ 0.21
NEK9-209ENST00000556170 ODR4Q5SWX8 454 aa16.33■□□□□ 0.21
NEK9-209ENST00000556170 CCDC113Q9H0I3 377 aa16.33■□□□□ 0.21
NEK9-209ENST00000556170 FAN1Q9Y2M0 1017 aa16.33■□□□□ 0.21
NEK9-209ENST00000556170 ZBTB12Q9Y330 459 aaPredicted RBP16.33■□□□□ 0.21
NEK9-209ENST00000556170 H0YHG0 523 aa16.33■□□□□ 0.2
NEK9-209ENST00000556170 KCNK3O14649 394 aa16.33■□□□□ 0.2
NEK9-209ENST00000556170 TUBB4BP68371 445 aa16.33■□□□□ 0.2
NEK9-209ENST00000556170 FAM83BQ5T0W9 1011 aa16.33■□□□□ 0.2
NEK9-209ENST00000556170 GLIS3Q8NEA6 775 aa16.33■□□□□ 0.2
NEK9-209ENST00000556170 LACRTQ9GZZ8 138 aa16.33■□□□□ 0.2
NEK9-209ENST00000556170 STK32BQ9NY57 414 aa16.33■□□□□ 0.2
NEK9-209ENST00000556170 MYO1AQ9UBC5 1043 aa16.33■□□□□ 0.2
NEK9-209ENST00000556170 hCG_1984214I3L0E3 225 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms