RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 Q9Y3F1 56 aa8.67□□□□□ -1.02
TDP1-214ENST00000556063 CYP3A7-CYP3A51PA0A087WV96 503 aa8.66□□□□□ -1.02
TDP1-214ENST00000556063 ADAMTS3O15072 1205 aa8.66□□□□□ -1.02
TDP1-214ENST00000556063 CCNT1O60563 726 aaKnown RBP8.66□□□□□ -1.02
TDP1-214ENST00000556063 DUSP11O75319 330 aaKnown RBP8.66□□□□□ -1.02
TDP1-214ENST00000556063 BAG4O95429 457 aaKnown RBP8.66□□□□□ -1.02
TDP1-214ENST00000556063 BMP15O95972 392 aa8.66□□□□□ -1.02
TDP1-214ENST00000556063 GH1P01241 217 aa8.66□□□□□ -1.02
TDP1-214ENST00000556063 ZSCAN22P10073 491 aaPredicted RBP8.66□□□□□ -1.02
TDP1-214ENST00000556063 CCL5P13501 91 aa8.66□□□□□ -1.02
TDP1-214ENST00000556063 ITGB5P18084 799 aa8.66□□□□□ -1.02
TDP1-214ENST00000556063 ATP2B1P20020 1258 aa8.66□□□□□ -1.02
TDP1-214ENST00000556063 CYP3A7P24462 503 aa8.66□□□□□ -1.02
TDP1-214ENST00000556063 ADCYAP1R1P41586 468 aa8.66□□□□□ -1.02
TDP1-214ENST00000556063 TRIM32Q13049 653 aa8.66□□□□□ -1.02
TDP1-214ENST00000556063 DUSP28Q4G0W2 176 aa8.66□□□□□ -1.02
TDP1-214ENST00000556063 PRR16Q569H4 304 aa8.66□□□□□ -1.02
TDP1-214ENST00000556063 TTC38Q5R3I4 469 aa8.66□□□□□ -1.02
TDP1-214ENST00000556063 TAPT1Q6NXT6 567 aa8.66□□□□□ -1.02
TDP1-214ENST00000556063 FERMT3Q86UX7 667 aa8.66□□□□□ -1.02
TDP1-214ENST00000556063 ZNF396Q96N95 335 aaPredicted RBP8.66□□□□□ -1.02
TDP1-214ENST00000556063 IPO9Q96P70 1041 aaKnown RBP8.66□□□□□ -1.02
TDP1-214ENST00000556063 SENP7Q9BQF6 1050 aa8.66□□□□□ -1.02
TDP1-214ENST00000556063 SDF4Q9BRK5 362 aa8.66□□□□□ -1.02
TDP1-214ENST00000556063 KATNBL1Q9H079 304 aa8.66□□□□□ -1.02
TDP1-214ENST00000556063 DDX20Q9UHI6 824 aaKnown RBP8.66□□□□□ -1.02
TDP1-214ENST00000556063 DDX25Q9UHL0 483 aaKnown RBP8.66□□□□□ -1.02
TDP1-214ENST00000556063 DDX41Q9UJV9 622 aaKnown RBP8.66□□□□□ -1.02
TDP1-214ENST00000556063 CIZ1Q9ULV3 898 aaPredicted RBP8.66□□□□□ -1.02
TDP1-214ENST00000556063 ATP6V1DQ9Y5K8 247 aa8.66□□□□□ -1.02
TDP1-214ENST00000556063 KIF28PB7ZC32 967 aa8.65□□□□□ -1.02
TDP1-214ENST00000556063 FAM86B1E9PN63 330 aa8.65□□□□□ -1.02
TDP1-214ENST00000556063 IPO5O00410 1097 aaKnown RBP8.65□□□□□ -1.02
TDP1-214ENST00000556063 TBX3O15119 743 aa8.65□□□□□ -1.02
TDP1-214ENST00000556063 ZEB2O60315 1214 aa8.65□□□□□ -1.02
TDP1-214ENST00000556063 MYCP01106 439 aaPredicted RBP8.65□□□□□ -1.02
TDP1-214ENST00000556063 GJB1P08034 283 aa8.65□□□□□ -1.02
TDP1-214ENST00000556063 FAM86B2P0C5J1 330 aa8.65□□□□□ -1.02
TDP1-214ENST00000556063 CCND3P30281 292 aaPredicted RBP8.65□□□□□ -1.02
TDP1-214ENST00000556063 LAMC2Q13753 1193 aa8.65□□□□□ -1.02
TDP1-214ENST00000556063 Q4G0T1 1027 aa8.65□□□□□ -1.02
TDP1-214ENST00000556063 MYSM1Q5VVJ2 828 aa8.65□□□□□ -1.02
TDP1-214ENST00000556063 CCDC62Q6P9F0 684 aa8.65□□□□□ -1.02
TDP1-214ENST00000556063 DHX37Q8IY37 1157 aaKnown RBP8.65□□□□□ -1.02
TDP1-214ENST00000556063 SLFN12Q8IYM2 578 aa8.65□□□□□ -1.02
TDP1-214ENST00000556063 ARRDC4Q8NCT1 418 aa8.65□□□□□ -1.02
TDP1-214ENST00000556063 TRPV1Q8NER1 839 aa8.65□□□□□ -1.02
TDP1-214ENST00000556063 ZFP91Q96JP5 570 aaPredicted RBP8.65□□□□□ -1.02
TDP1-214ENST00000556063 FAM20AQ96MK3 541 aa8.65□□□□□ -1.02
TDP1-214ENST00000556063 MBOAT7Q96N66 472 aa8.65□□□□□ -1.02
TDP1-214ENST00000556063 ZNF577Q9BSK1 485 aa8.65□□□□□ -1.02
TDP1-214ENST00000556063 UNC93B1Q9H1C4 597 aa8.65□□□□□ -1.02
TDP1-214ENST00000556063 MLXIPQ9HAP2 919 aa8.65□□□□□ -1.02
TDP1-214ENST00000556063 PDGFCQ9NRA1 345 aa8.65□□□□□ -1.02
TDP1-214ENST00000556063 KCNH7Q9NS40 1196 aa8.65□□□□□ -1.02
TDP1-214ENST00000556063 TBC1D22BQ9NU19 505 aa8.65□□□□□ -1.02
TDP1-214ENST00000556063 CEP131Q9UPN4 1083 aa8.65□□□□□ -1.02
TDP1-214ENST00000556063 DDX49Q9Y6V7 483 aaKnown RBP8.65□□□□□ -1.02
TDP1-214ENST00000556063 CEP350Q5VT06 3117 aa8.65□□□□□ -1.02
TDP1-214ENST00000556063 NFASCO94856 1347 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 IGLV3-22A0A075B6J6 115 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 FAM205CA6NFA0 338 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 LAD1O00515 517 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 NOP56O00567 594 aaKnown RBP8.64□□□□□ -1.03
TDP1-214ENST00000556063 DYNC1LI2O43237 492 aaPredicted RBP8.64□□□□□ -1.03
TDP1-214ENST00000556063 NEMFO60524 1076 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 KPNA6O60684 536 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 GAS7O60861 476 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 RGS20O76081 388 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 TDP2O95551 362 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 GGPS1O95749 300 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 F13A1P00488 732 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 ARP10275 920 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 SMPD1P17405 629 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 MCM7P33993 719 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 CPT1AP50416 773 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 RESTQ13127 1097 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 MTFR1Q15390 333 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 ZNF174Q15697 407 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 CALCRLQ16602 461 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 EARS2Q5JPH6 523 aaKnown RBP8.64□□□□□ -1.03
TDP1-214ENST00000556063 CELF3Q5SZQ8 465 aaKnown RBP8.64□□□□□ -1.03
TDP1-214ENST00000556063 COL13A1Q5TAT6 717 aaPredicted RBP8.64□□□□□ -1.03
TDP1-214ENST00000556063 ATL3Q6DD88 541 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 METTL7BQ6UX53 244 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 RNF180Q86T96 592 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 TLK2Q86UE8 772 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 TNS4Q8IZW8 715 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 OR6J1Q8NGC5 347 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 CYP2W1Q8TAV3 490 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 EMID1Q96A84 441 aaPredicted RBP8.64□□□□□ -1.03
TDP1-214ENST00000556063 DEFB118Q96PH6 123 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 RIT2Q99578 217 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 AGO4Q9HCK5 861 aaKnown RBP8.64□□□□□ -1.03
TDP1-214ENST00000556063 XPNPEP3Q9NQH7 507 aa8.64□□□□□ -1.03
TDP1-214ENST00000556063 PAK6Q9NQU5 681 aaPredicted RBP8.64□□□□□ -1.03
TDP1-214ENST00000556063 LRRC37A2A6NM11 1700 aa8.63□□□□□ -1.03
TDP1-214ENST00000556063 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.63□□□□□ -1.03
TDP1-214ENST00000556063 MSH4O15457 936 aa8.63□□□□□ -1.03
TDP1-214ENST00000556063 ARIH2O95376 493 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms