RNA–Protein interactions for RNA: ENST00000555941.1

LRP1-209, Transcript of LDL receptor related protein 1, humanhuman

TSL 3

Gene LRP1, Length 499 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-209ENST00000555941 IGDCC4Q8TDY8 1250 aa13.32□□□□□ -0.28
LRP1-209ENST00000555941 PPP1R13LQ8WUF5 828 aa13.32□□□□□ -0.28
LRP1-209ENST00000555941 PPM1EQ8WY54 764 aa13.32□□□□□ -0.28
LRP1-209ENST00000555941 SPATA33Q96N06 139 aa13.32□□□□□ -0.28
LRP1-209ENST00000555941 LZTS2Q9BRK4 669 aa13.32□□□□□ -0.28
LRP1-209ENST00000555941 HDAC6Q9UBN7 1215 aa13.32□□□□□ -0.28
LRP1-209ENST00000555941 TET1Q8NFU7 2136 aa13.31□□□□□ -0.28
LRP1-209ENST00000555941 BAZ2BQ9UIF8 2168 aaKnown RBP13.31□□□□□ -0.28
LRP1-209ENST00000555941 ABHD14A-ACY1A0A1B0GW23 586 aa13.31□□□□□ -0.28
LRP1-209ENST00000555941 CYTH3O43739 400 aa13.31□□□□□ -0.28
LRP1-209ENST00000555941 GGPS1O95749 300 aa13.31□□□□□ -0.28
LRP1-209ENST00000555941 CA3P07451 260 aa13.31□□□□□ -0.28
LRP1-209ENST00000555941 CKBP12277 381 aa13.31□□□□□ -0.28
LRP1-209ENST00000555941 KIF5BP33176 963 aa13.31□□□□□ -0.28
LRP1-209ENST00000555941 MRPS5P82675 430 aaKnown RBP13.31□□□□□ -0.28
LRP1-209ENST00000555941 SLC35G1Q2M3R5 365 aa13.31□□□□□ -0.28
LRP1-209ENST00000555941 GNPTABQ3T906 1256 aa13.31□□□□□ -0.28
LRP1-209ENST00000555941 XRRA1Q6P2D8 792 aa13.31□□□□□ -0.28
LRP1-209ENST00000555941 CNKSR3Q6P9H4 555 aa13.31□□□□□ -0.28
LRP1-209ENST00000555941 DHX38Q92620 1227 aaKnown RBP13.31□□□□□ -0.28
LRP1-209ENST00000555941 ASB2Q96Q27 587 aa13.31□□□□□ -0.28
LRP1-209ENST00000555941 ALG1Q9BT22 464 aa13.31□□□□□ -0.28
LRP1-209ENST00000555941 SPZ1Q9BXG8 430 aa13.31□□□□□ -0.28
LRP1-209ENST00000555941 VCANP13611 3396 aa13.31□□□□□ -0.28
LRP1-209ENST00000555941 FRMPD4Q14CM0 1322 aa13.31□□□□□ -0.28
LRP1-209ENST00000555941 GTPBP6O43824 516 aaPredicted RBP13.3□□□□□ -0.28
LRP1-209ENST00000555941 DDAH1O94760 285 aa13.3□□□□□ -0.28
LRP1-209ENST00000555941 ZNF286BP0CG31 522 aa13.3□□□□□ -0.28
LRP1-209ENST00000555941 ICAM3P32942 547 aa13.3□□□□□ -0.28
LRP1-209ENST00000555941 GNAQP50148 359 aa13.3□□□□□ -0.28
LRP1-209ENST00000555941 NEDD9Q14511 834 aa13.3□□□□□ -0.28
LRP1-209ENST00000555941 GPNMBQ14956 572 aa13.3□□□□□ -0.28
LRP1-209ENST00000555941 HSDL1Q3SXM5 330 aa13.3□□□□□ -0.28
LRP1-209ENST00000555941 FCHSD1Q86WN1 690 aa13.3□□□□□ -0.28
LRP1-209ENST00000555941 MB21D2Q8IYB1 491 aaPredicted RBP13.3□□□□□ -0.28
LRP1-209ENST00000555941 IL31RAQ8NI17 732 aa13.3□□□□□ -0.28
LRP1-209ENST00000555941 CTCFLQ8NI51 663 aaPredicted RBP13.3□□□□□ -0.28
LRP1-209ENST00000555941 MLXIPQ9HAP2 919 aa13.3□□□□□ -0.28
LRP1-209ENST00000555941 SENP2Q9HC62 589 aa13.3□□□□□ -0.28
LRP1-209ENST00000555941 EMSYQ7Z589 1322 aa13.3□□□□□ -0.28
LRP1-209ENST00000555941 SPATA31C2B4DYI2 1134 aa13.29□□□□□ -0.28
LRP1-209ENST00000555941 PIK3CDO00329 1044 aa13.29□□□□□ -0.28
LRP1-209ENST00000555941 TLL1O43897 1013 aa13.29□□□□□ -0.28
LRP1-209ENST00000555941 UBA1P22314 1058 aaKnown RBP13.29□□□□□ -0.28
LRP1-209ENST00000555941 ANTXR2P58335 489 aa13.29□□□□□ -0.28
LRP1-209ENST00000555941 WDR5P61964 334 aaKnown RBP13.29□□□□□ -0.28
LRP1-209ENST00000555941 SP2Q02086 613 aa13.29□□□□□ -0.28
LRP1-209ENST00000555941 TAP1Q03518 808 aa13.29□□□□□ -0.28
LRP1-209ENST00000555941 IKBKEQ14164 716 aa13.29□□□□□ -0.28
LRP1-209ENST00000555941 CCDC85BQ15834 202 aaPredicted RBP13.29□□□□□ -0.28
LRP1-209ENST00000555941 AAK1Q2M2I8 961 aa13.29□□□□□ -0.28
LRP1-209ENST00000555941 TRIM71Q2Q1W2 868 aaKnown RBP13.29□□□□□ -0.28
LRP1-209ENST00000555941 CASC1Q6TDU7 716 aa13.29□□□□□ -0.28
LRP1-209ENST00000555941 CUL5Q93034 780 aa13.29□□□□□ -0.28
LRP1-209ENST00000555941 RRP36Q96EU6 259 aaKnown RBP13.29□□□□□ -0.28
LRP1-209ENST00000555941 TMEM87BQ96K49 555 aa13.29□□□□□ -0.28
LRP1-209ENST00000555941 INPP4AQ96PE3 977 aaPredicted RBP13.29□□□□□ -0.28
LRP1-209ENST00000555941 C16orf70Q9BSU1 422 aa13.29□□□□□ -0.28
LRP1-209ENST00000555941 USP26Q9BXU7 913 aa13.29□□□□□ -0.28
LRP1-209ENST00000555941 PRDM6Q9NQX0 595 aa13.29□□□□□ -0.28
LRP1-209ENST00000555941 RBM8AQ9Y5S9 174 aaKnown RBP13.29□□□□□ -0.28
LRP1-209ENST00000555941 TAF6LQ9Y6J9 622 aa13.29□□□□□ -0.28
LRP1-209ENST00000555941 SPTBN5Q9NRC6 3674 aaKnown RBP13.28□□□□□ -0.28
LRP1-209ENST00000555941 H3BRB1 525 aa13.28□□□□□ -0.28
LRP1-209ENST00000555941 TNFRSF10AO00220 468 aa13.28□□□□□ -0.28
LRP1-209ENST00000555941 NOP56O00567 594 aaKnown RBP13.28□□□□□ -0.28
LRP1-209ENST00000555941 FIBPO43427 364 aa13.28□□□□□ -0.28
LRP1-209ENST00000555941 NBNO60934 754 aa13.28□□□□□ -0.28
LRP1-209ENST00000555941 CAND2O75155 1236 aa13.28□□□□□ -0.28
LRP1-209ENST00000555941 CALM1P0DP23 149 aa13.28□□□□□ -0.28
LRP1-209ENST00000555941 CALM2P0DP24 149 aa13.28□□□□□ -0.28
LRP1-209ENST00000555941 CALM3P0DP25 149 aa13.28□□□□□ -0.28
LRP1-209ENST00000555941 MCM5P33992 734 aa13.28□□□□□ -0.28
LRP1-209ENST00000555941 METTL7BQ6UX53 244 aa13.28□□□□□ -0.28
LRP1-209ENST00000555941 SERINC5Q86VE9 423 aa13.28□□□□□ -0.28
LRP1-209ENST00000555941 ZNF654Q8IZM8 581 aa13.28□□□□□ -0.28
LRP1-209ENST00000555941 GIMAP8Q8ND71 665 aaPredicted RBP13.28□□□□□ -0.28
LRP1-209ENST00000555941 IL27Q8NEV9 243 aa13.28□□□□□ -0.28
LRP1-209ENST00000555941 SENP7Q9BQF6 1050 aa13.28□□□□□ -0.28
LRP1-209ENST00000555941 ZBED2Q9BTP6 218 aa13.28□□□□□ -0.28
LRP1-209ENST00000555941 TUT1Q9H6E5 874 aaKnown RBP13.28□□□□□ -0.28
LRP1-209ENST00000555941 LY9Q9HBG7 655 aa13.28□□□□□ -0.28
LRP1-209ENST00000555941 SEC63Q9UGP8 760 aaKnown RBP13.28□□□□□ -0.28
LRP1-209ENST00000555941 MTCH2Q9Y6C9 303 aa13.28□□□□□ -0.28
LRP1-209ENST00000555941 NCOR1O75376 2440 aa13.28□□□□□ -0.28
LRP1-209ENST00000555941 C17orf102A2RUQ5 167 aa13.27□□□□□ -0.29
LRP1-209ENST00000555941 GNAT1P11488 350 aa13.27□□□□□ -0.29
LRP1-209ENST00000555941 HOXC8P31273 242 aa13.27□□□□□ -0.29
LRP1-209ENST00000555941 LIFRP42702 1097 aa13.27□□□□□ -0.29
LRP1-209ENST00000555941 MRPS9P82933 396 aaKnown RBP13.27□□□□□ -0.29
LRP1-209ENST00000555941 ZNF618Q5T7W0 954 aa13.27□□□□□ -0.29
LRP1-209ENST00000555941 PCNX4Q63HM2 1172 aa13.27□□□□□ -0.29
LRP1-209ENST00000555941 TRAF7Q6Q0C0 670 aa13.27□□□□□ -0.29
LRP1-209ENST00000555941 SMARCC2Q8TAQ2 1214 aa13.27□□□□□ -0.29
LRP1-209ENST00000555941 RAD9AQ99638 391 aa13.27□□□□□ -0.29
LRP1-209ENST00000555941 LMCD1Q9NZU5 365 aa13.27□□□□□ -0.29
LRP1-209ENST00000555941 BDP1A6H8Y1 2624 aa13.26□□□□□ -0.29
LRP1-209ENST00000555941 CCDC69A6NI79 296 aa13.26□□□□□ -0.29
LRP1-209ENST00000555941 RSPH10B2B2RC85 870 aa13.26□□□□□ -0.29
LRP1-209ENST00000555941 PRC1O43663 620 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms