RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 TEX2Q8IWB9 1127 aa11.05□□□□□ -0.64
ACTN1-215ENST00000555616 CCDC83Q8IWF9 413 aa11.05□□□□□ -0.64
ACTN1-215ENST00000555616 NECAB1Q8N987 351 aa11.05□□□□□ -0.64
ACTN1-215ENST00000555616 LRCH3Q96II8 777 aa11.05□□□□□ -0.64
ACTN1-215ENST00000555616 INPP4AQ96PE3 977 aaPredicted RBP11.05□□□□□ -0.64
ACTN1-215ENST00000555616 MRVI1Q9Y6F6 885 aa11.05□□□□□ -0.64
ACTN1-215ENST00000555616 hCG_1642624A0A1W2PR95 340 aa11.04□□□□□ -0.64
ACTN1-215ENST00000555616 STAM2O75886 525 aa11.04□□□□□ -0.64
ACTN1-215ENST00000555616 MYCLP12524 364 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-215ENST00000555616 HOXD8P13378 290 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-215ENST00000555616 UBA1P22314 1058 aaKnown RBP11.04□□□□□ -0.64
ACTN1-215ENST00000555616 EPHB4P54760 987 aa11.04□□□□□ -0.64
ACTN1-215ENST00000555616 CCT2P78371 535 aaKnown RBP11.04□□□□□ -0.64
ACTN1-215ENST00000555616 SCRN1Q12765 414 aa11.04□□□□□ -0.64
ACTN1-215ENST00000555616 C9orf50Q5SZB4 431 aa11.04□□□□□ -0.64
ACTN1-215ENST00000555616 WWC2Q6AWC2 1192 aa11.04□□□□□ -0.64
ACTN1-215ENST00000555616 MFSD5Q6N075 450 aa11.04□□□□□ -0.64
ACTN1-215ENST00000555616 XRRA1Q6P2D8 792 aa11.04□□□□□ -0.64
ACTN1-215ENST00000555616 USP17L6PQ6QN14 398 aa11.04□□□□□ -0.64
ACTN1-215ENST00000555616 PPTC7Q8NI37 304 aa11.04□□□□□ -0.64
ACTN1-215ENST00000555616 SMARCC2Q8TAQ2 1214 aa11.04□□□□□ -0.64
ACTN1-215ENST00000555616 AFG1LQ8WV93 481 aa11.04□□□□□ -0.64
ACTN1-215ENST00000555616 CUL5Q93034 780 aa11.04□□□□□ -0.64
ACTN1-215ENST00000555616 LLPHQ9BRT6 129 aaKnown RBP11.04□□□□□ -0.64
ACTN1-215ENST00000555616 NCOA5Q9HCD5 579 aaKnown RBP11.04□□□□□ -0.64
ACTN1-215ENST00000555616 FAM217BQ9NTX9 383 aaPredicted RBP11.04□□□□□ -0.64
ACTN1-215ENST00000555616 KIF3AQ9Y496 699 aa11.04□□□□□ -0.64
ACTN1-215ENST00000555616 SCN10AQ9Y5Y9 1956 aa11.04□□□□□ -0.64
ACTN1-215ENST00000555616 KIAA1217Q5T5P2 1943 aa11.03□□□□□ -0.64
ACTN1-215ENST00000555616 BAZ2BQ9UIF8 2168 aaKnown RBP11.03□□□□□ -0.64
ACTN1-215ENST00000555616 hCG_1984214I3L0E3 225 aa11.03□□□□□ -0.64
ACTN1-215ENST00000555616 B4GALT4O60513 344 aa11.03□□□□□ -0.64
ACTN1-215ENST00000555616 F2P00734 622 aa11.03□□□□□ -0.64
ACTN1-215ENST00000555616 TGFB3P10600 412 aa11.03□□□□□ -0.64
ACTN1-215ENST00000555616 ICAM3P32942 547 aa11.03□□□□□ -0.64
ACTN1-215ENST00000555616 MRPS9P82933 396 aaKnown RBP11.03□□□□□ -0.64
ACTN1-215ENST00000555616 HMGN5P82970 282 aaKnown RBP11.03□□□□□ -0.64
ACTN1-215ENST00000555616 PTPN11Q06124 597 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-215ENST00000555616 LAMC2Q13753 1193 aa11.03□□□□□ -0.64
ACTN1-215ENST00000555616 SHHQ15465 462 aa11.03□□□□□ -0.64
ACTN1-215ENST00000555616 GNPTABQ3T906 1256 aa11.03□□□□□ -0.64
ACTN1-215ENST00000555616 PCNX4Q63HM2 1172 aa11.03□□□□□ -0.64
ACTN1-215ENST00000555616 NFRKBQ6P4R8 1299 aa11.03□□□□□ -0.64
ACTN1-215ENST00000555616 HEATR3Q7Z4Q2 680 aa11.03□□□□□ -0.64
ACTN1-215ENST00000555616 CCDC82Q8N4S0 544 aa11.03□□□□□ -0.64
ACTN1-215ENST00000555616 ZNF713Q8N859 430 aaPredicted RBP11.03□□□□□ -0.64
ACTN1-215ENST00000555616 GPKOWQ92917 476 aaPredicted RBP eCLIP11.03□□□□□ -0.64
ACTN1-215ENST00000555616 NOC4LQ9BVI4 516 aaKnown RBP11.03□□□□□ -0.64
ACTN1-215ENST00000555616 TRPV6Q9H1D0 765 aa11.03□□□□□ -0.64
ACTN1-215ENST00000555616 HIPK3Q9H422 1215 aa11.03□□□□□ -0.64
ACTN1-215ENST00000555616 PSTPIP2Q9H939 334 aa11.03□□□□□ -0.64
ACTN1-215ENST00000555616 SMC3Q9UQE7 1217 aa11.03□□□□□ -0.64
ACTN1-215ENST00000555616 FIBPO43427 364 aa11.02□□□□□ -0.65
ACTN1-215ENST00000555616 GGPS1O95749 300 aa11.02□□□□□ -0.65
ACTN1-215ENST00000555616 SUPT20HL2P0C7V6 817 aa11.02□□□□□ -0.65
ACTN1-215ENST00000555616 CDC27P30260 824 aa11.02□□□□□ -0.65
ACTN1-215ENST00000555616 SP2Q02086 613 aa11.02□□□□□ -0.65
ACTN1-215ENST00000555616 PPIGQ13427 754 aaKnown RBP eCLIP11.02□□□□□ -0.651e-11■□□□□ 11.3
ACTN1-215ENST00000555616 DGKDQ16760 1214 aa11.02□□□□□ -0.65
ACTN1-215ENST00000555616 NBPF20Q3BBV1 942 aa11.02□□□□□ -0.65
ACTN1-215ENST00000555616 CELF3Q5SZQ8 465 aaKnown RBP11.02□□□□□ -0.65
ACTN1-215ENST00000555616 MYSM1Q5VVJ2 828 aa11.02□□□□□ -0.65
ACTN1-215ENST00000555616 TYW1BQ6NUM6 668 aa11.02□□□□□ -0.65
ACTN1-215ENST00000555616 SESTD1Q86VW0 696 aa11.02□□□□□ -0.65
ACTN1-215ENST00000555616 DHX37Q8IY37 1157 aaKnown RBP11.02□□□□□ -0.65
ACTN1-215ENST00000555616 TRIM22Q8IYM9 498 aa11.02□□□□□ -0.65
ACTN1-215ENST00000555616 SPRYD3Q8NCJ5 442 aa11.02□□□□□ -0.65
ACTN1-215ENST00000555616 KAT2BQ92831 832 aa11.02□□□□□ -0.65
ACTN1-215ENST00000555616 PPP1R12CQ9BZL4 782 aa11.02□□□□□ -0.65
ACTN1-215ENST00000555616 FOXD4L1Q9NU39 408 aa11.02□□□□□ -0.65
ACTN1-215ENST00000555616 TRMT13Q9NUP7 481 aaKnown RBP11.02□□□□□ -0.65
ACTN1-215ENST00000555616 LAMA2P24043 3122 aaKnown RBP11.01□□□□□ -0.65
ACTN1-215ENST00000555616 SPATA31C2B4DYI2 1134 aa11.01□□□□□ -0.65
ACTN1-215ENST00000555616 STXBP3O00186 592 aa11.01□□□□□ -0.65
ACTN1-215ENST00000555616 CSF2RAP15509 400 aa11.01□□□□□ -0.65
ACTN1-215ENST00000555616 IFNAR1P17181 557 aa11.01□□□□□ -0.65
ACTN1-215ENST00000555616 ADD1P35611 737 aaKnown RBP11.01□□□□□ -0.65
ACTN1-215ENST00000555616 AKAP17AQ02040 695 aaKnown RBP11.01□□□□□ -0.65
ACTN1-215ENST00000555616 ST3GAL1Q11201 340 aa11.01□□□□□ -0.65
ACTN1-215ENST00000555616 SEMA3FQ13275 785 aa11.01□□□□□ -0.65
ACTN1-215ENST00000555616 UBE2SQ16763 222 aa11.01□□□□□ -0.65
ACTN1-215ENST00000555616 TMEM199Q8N511 208 aa11.01□□□□□ -0.65
ACTN1-215ENST00000555616 NSUN7Q8NE18 718 aaKnown RBP11.01□□□□□ -0.65
ACTN1-215ENST00000555616 ZFP91Q96JP5 570 aaPredicted RBP11.01□□□□□ -0.65
ACTN1-215ENST00000555616 SPATA33Q96N06 139 aa11.01□□□□□ -0.65
ACTN1-215ENST00000555616 WNT8AQ9H1J5 351 aa11.01□□□□□ -0.65
ACTN1-215ENST00000555616 BARHL2Q9NY43 387 aa11.01□□□□□ -0.65
ACTN1-215ENST00000555616 V9GY48 417 aaPredicted RBP11.01□□□□□ -0.65
ACTN1-215ENST00000555616 UMODL1Q5DID0 1318 aa11.01□□□□□ -0.65
ACTN1-215ENST00000555616 SPDYE3A6NKU9 549 aa11□□□□□ -0.65
ACTN1-215ENST00000555616 HAS3O00219 553 aa11□□□□□ -0.65
ACTN1-215ENST00000555616 PPFIA4O75335 1185 aa11□□□□□ -0.65
ACTN1-215ENST00000555616 ZNF286BP0CG31 522 aa11□□□□□ -0.65
ACTN1-215ENST00000555616 PDCP20941 246 aa11□□□□□ -0.65
ACTN1-215ENST00000555616 CYP2C18P33260 490 aa11□□□□□ -0.65
ACTN1-215ENST00000555616 ADCY7P51828 1080 aa11□□□□□ -0.65
ACTN1-215ENST00000555616 NAPAP54920 295 aa11□□□□□ -0.65
ACTN1-215ENST00000555616 SSRP1Q08945 709 aaKnown RBP11□□□□□ -0.65
ACTN1-215ENST00000555616 PFKFB3Q16875 520 aaPredicted RBP11□□□□□ -0.65
ACTN1-215ENST00000555616 HSDL1Q3SXM5 330 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms