RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 ARIH2O95376 493 aa14.41□□□□□ -0.1
SYNE2-219ENST00000555323 BRD1O95696 1058 aa14.41□□□□□ -0.1
SYNE2-219ENST00000555323 ZSCAN22P10073 491 aaPredicted RBP14.41□□□□□ -0.1
SYNE2-219ENST00000555323 ARP10275 920 aa14.41□□□□□ -0.1
SYNE2-219ENST00000555323 SMPD1P17405 629 aa14.41□□□□□ -0.1
SYNE2-219ENST00000555323 CAPN2P17655 700 aa14.41□□□□□ -0.1
SYNE2-219ENST00000555323 SETQ01105 290 aaPredicted RBP14.41□□□□□ -0.1
SYNE2-219ENST00000555323 SP2Q02086 613 aa14.41□□□□□ -0.1
SYNE2-219ENST00000555323 TNFAIP2Q03169 654 aa14.41□□□□□ -0.1
SYNE2-219ENST00000555323 RESTQ13127 1097 aa14.41□□□□□ -0.1
SYNE2-219ENST00000555323 MTMR1Q13613 665 aa14.41□□□□□ -0.1
SYNE2-219ENST00000555323 PKP1Q13835 747 aa14.41□□□□□ -0.1
SYNE2-219ENST00000555323 LETM2Q2VYF4 491 aa14.41□□□□□ -0.1
SYNE2-219ENST00000555323 LHX8Q68G74 356 aa14.41□□□□□ -0.1
SYNE2-219ENST00000555323 PLA2G4DQ86XP0 818 aa14.41□□□□□ -0.1
SYNE2-219ENST00000555323 IPO9Q96P70 1041 aaKnown RBP14.41□□□□□ -0.1
SYNE2-219ENST00000555323 DAXXQ9UER7 740 aaPredicted RBP14.41□□□□□ -0.1
SYNE2-219ENST00000555323 DDX20Q9UHI6 824 aaKnown RBP14.41□□□□□ -0.1
SYNE2-219ENST00000555323 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.4□□□□□ -0.1
SYNE2-219ENST00000555323 WNT7AO00755 349 aa14.4□□□□□ -0.1
SYNE2-219ENST00000555323 ADCY6O43306 1168 aa14.4□□□□□ -0.1
SYNE2-219ENST00000555323 CCNT1O60563 726 aaKnown RBP14.4□□□□□ -0.1
SYNE2-219ENST00000555323 ATP9AO75110 1047 aa14.4□□□□□ -0.1
SYNE2-219ENST00000555323 TDP2O95551 362 aa14.4□□□□□ -0.1
SYNE2-219ENST00000555323 TXNP10599 105 aaKnown RBP14.4□□□□□ -0.1
SYNE2-219ENST00000555323 CCL5P13501 91 aa14.4□□□□□ -0.1
SYNE2-219ENST00000555323 PRR16Q569H4 304 aa14.4□□□□□ -0.1
SYNE2-219ENST00000555323 TMEM63BQ5T3F8 832 aa14.4□□□□□ -0.1
SYNE2-219ENST00000555323 MYSM1Q5VVJ2 828 aa14.4□□□□□ -0.1
SYNE2-219ENST00000555323 GIMAP8Q8ND71 665 aaPredicted RBP14.4□□□□□ -0.1
SYNE2-219ENST00000555323 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.4□□□□□ -0.1
SYNE2-219ENST00000555323 UNC93B1Q9H1C4 597 aa14.4□□□□□ -0.1
SYNE2-219ENST00000555323 AGO4Q9HCK5 861 aaKnown RBP14.4□□□□□ -0.1
SYNE2-219ENST00000555323 NOL7Q9UMY1 257 aaKnown RBP14.4□□□□□ -0.1
SYNE2-219ENST00000555323 ZDHHC9Q9Y397 364 aa14.4□□□□□ -0.1
SYNE2-219ENST00000555323 MRVI1Q9Y6F6 885 aa14.4□□□□□ -0.1
SYNE2-219ENST00000555323 MCM3APO60318 1980 aa14.4□□□□□ -0.1
SYNE2-219ENST00000555323 TBX3O15119 743 aa14.39□□□□□ -0.11
SYNE2-219ENST00000555323 DHX15O43143 795 aaKnown RBP14.39□□□□□ -0.11
SYNE2-219ENST00000555323 GJB1P08034 283 aa14.39□□□□□ -0.11
SYNE2-219ENST00000555323 KCNA2P16389 499 aa14.39□□□□□ -0.11
SYNE2-219ENST00000555323 CNGA1P29973 690 aa14.39□□□□□ -0.11
SYNE2-219ENST00000555323 NUCB2P80303 420 aa14.39□□□□□ -0.11
SYNE2-219ENST00000555323 NEDD9Q14511 834 aa14.39□□□□□ -0.11
SYNE2-219ENST00000555323 LY6KQ17RY6 165 aa14.39□□□□□ -0.11
SYNE2-219ENST00000555323 FERMT3Q86UX7 667 aa14.39□□□□□ -0.11
SYNE2-219ENST00000555323 EMID1Q96A84 441 aaPredicted RBP14.39□□□□□ -0.11
SYNE2-219ENST00000555323 RNF208Q9H0X6 261 aa14.39□□□□□ -0.11
SYNE2-219ENST00000555323 KCNMB3Q9NPA1 279 aa14.39□□□□□ -0.11
SYNE2-219ENST00000555323 DDX25Q9UHL0 483 aaKnown RBP14.39□□□□□ -0.11
SYNE2-219ENST00000555323 CENPFP49454 3210 aa14.39□□□□□ -0.11
SYNE2-219ENST00000555323 MYH7BA7E2Y1 1941 aa14.39□□□□□ -0.11
SYNE2-219ENST00000555323 NFASCO94856 1347 aa14.39□□□□□ -0.11
SYNE2-219ENST00000555323 LRRC37A2A6NM11 1700 aa14.38□□□□□ -0.11
SYNE2-219ENST00000555323 POTEFA5A3E0 1075 aa14.38□□□□□ -0.11
SYNE2-219ENST00000555323 MSH4O15457 936 aa14.38□□□□□ -0.11
SYNE2-219ENST00000555323 SLC37A4O43826 429 aa14.38□□□□□ -0.11
SYNE2-219ENST00000555323 F13A1P00488 732 aa14.38□□□□□ -0.11
SYNE2-219ENST00000555323 RARBP10826 455 aa14.38□□□□□ -0.11
SYNE2-219ENST00000555323 UBA1P22314 1058 aaKnown RBP14.38□□□□□ -0.11
SYNE2-219ENST00000555323 GJA9P57773 515 aa14.38□□□□□ -0.11
SYNE2-219ENST00000555323 LAMC2Q13753 1193 aa14.38□□□□□ -0.11
SYNE2-219ENST00000555323 TTC38Q5R3I4 469 aa14.38□□□□□ -0.11
SYNE2-219ENST00000555323 CELF3Q5SZQ8 465 aaKnown RBP14.38□□□□□ -0.11
SYNE2-219ENST00000555323 C4orf32Q8N8J7 132 aa14.38□□□□□ -0.11
SYNE2-219ENST00000555323 ETNPPLQ8TBG4 499 aa14.38□□□□□ -0.11
SYNE2-219ENST00000555323 SLC5A5Q92911 643 aa14.38□□□□□ -0.11
SYNE2-219ENST00000555323 FAM20AQ96MK3 541 aa14.38□□□□□ -0.11
SYNE2-219ENST00000555323 RIT2Q99578 217 aa14.38□□□□□ -0.11
SYNE2-219ENST00000555323 CRISPLD2Q9H0B8 497 aa14.38□□□□□ -0.11
SYNE2-219ENST00000555323 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.38□□□□□ -0.11
SYNE2-219ENST00000555323 TBC1D22BQ9NU19 505 aa14.38□□□□□ -0.11
SYNE2-219ENST00000555323 CIZ1Q9ULV3 898 aaPredicted RBP14.38□□□□□ -0.11
SYNE2-219ENST00000555323 PCDHB6Q9Y5E3 794 aa14.38□□□□□ -0.11
SYNE2-219ENST00000555323 IPO5O00410 1097 aaKnown RBP14.37□□□□□ -0.11
SYNE2-219ENST00000555323 ADAMTS4O75173 837 aa14.37□□□□□ -0.11
SYNE2-219ENST00000555323 SGPL1O95470 568 aa14.37□□□□□ -0.11
SYNE2-219ENST00000555323 GH1P01241 217 aa14.37□□□□□ -0.11
SYNE2-219ENST00000555323 ARHGAP1Q07960 439 aa14.37□□□□□ -0.11
SYNE2-219ENST00000555323 ZNF174Q15697 407 aa14.37□□□□□ -0.11
SYNE2-219ENST00000555323 METTL7BQ6UX53 244 aa14.37□□□□□ -0.11
SYNE2-219ENST00000555323 KLHDC9Q8NEP7 349 aa14.37□□□□□ -0.11
SYNE2-219ENST00000555323 HAS1Q92839 578 aa14.37□□□□□ -0.11
SYNE2-219ENST00000555323 COPS5Q92905 334 aa14.37□□□□□ -0.11
SYNE2-219ENST00000555323 MTMR9Q96QG7 549 aa14.37□□□□□ -0.11
SYNE2-219ENST00000555323 ZNF577Q9BSK1 485 aa14.37□□□□□ -0.11
SYNE2-219ENST00000555323 UPF3AQ9H1J1 476 aaKnown RBP14.37□□□□□ -0.11
SYNE2-219ENST00000555323 BCAS3Q9H6U6 928 aa14.37□□□□□ -0.11
SYNE2-219ENST00000555323 OGDHLQ9ULD0 1010 aa14.37□□□□□ -0.11
SYNE2-219ENST00000555323 KIAA1217Q5T5P2 1943 aa14.37□□□□□ -0.11
SYNE2-219ENST00000555323 LAD1O00515 517 aa14.36□□□□□ -0.11
SYNE2-219ENST00000555323 CTAGE5O15320 804 aa14.36□□□□□ -0.11
SYNE2-219ENST00000555323 DYNC1LI2O43237 492 aaPredicted RBP14.36□□□□□ -0.11
SYNE2-219ENST00000555323 NEMFO60524 1076 aa14.36□□□□□ -0.11
SYNE2-219ENST00000555323 PSMD10O75832 226 aa14.36□□□□□ -0.11
SYNE2-219ENST00000555323 FARP2O94887 1054 aaPredicted RBP14.36□□□□□ -0.11
SYNE2-219ENST00000555323 ATP2B1P20020 1258 aa14.36□□□□□ -0.11
SYNE2-219ENST00000555323 CST5P28325 142 aaPredicted RBP14.36□□□□□ -0.11
SYNE2-219ENST00000555323 MCM7P33993 719 aa14.36□□□□□ -0.11
SYNE2-219ENST00000555323 GJA8P48165 433 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms