RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 DDX25Q9UHL0 483 aaKnown RBP16.22■□□□□ 0.19
CHD8-208ENST00000555301 DOCK3Q8IZD9 2030 aa16.22■□□□□ 0.19
CHD8-208ENST00000555301 TDP2O95551 362 aa16.21■□□□□ 0.19
CHD8-208ENST00000555301 RARBP10826 455 aa16.21■□□□□ 0.19
CHD8-208ENST00000555301 RESTQ13127 1097 aa16.21■□□□□ 0.19
CHD8-208ENST00000555301 NEDD9Q14511 834 aa16.21■□□□□ 0.19
CHD8-208ENST00000555301 MTFR1Q15390 333 aa16.21■□□□□ 0.19
CHD8-208ENST00000555301 CCDC62Q6P9F0 684 aa16.21■□□□□ 0.19
CHD8-208ENST00000555301 GIMAP8Q8ND71 665 aaPredicted RBP16.21■□□□□ 0.19
CHD8-208ENST00000555301 IPO9Q96P70 1041 aaKnown RBP16.21■□□□□ 0.19
CHD8-208ENST00000555301 SENP7Q9BQF6 1050 aa16.21■□□□□ 0.19
CHD8-208ENST00000555301 UNC93B1Q9H1C4 597 aa16.21■□□□□ 0.19
CHD8-208ENST00000555301 PAK6Q9NQU5 681 aaPredicted RBP16.21■□□□□ 0.19
CHD8-208ENST00000555301 DDX41Q9UJV9 622 aaKnown RBP16.21■□□□□ 0.19
CHD8-208ENST00000555301 Q9Y3F1 56 aa16.21■□□□□ 0.19
CHD8-208ENST00000555301 PLXNA1Q9UIW2 1896 aa16.2■□□□□ 0.18
CHD8-208ENST00000555301 ZNFX1Q9P2E3 1918 aaKnown RBP16.2■□□□□ 0.18
CHD8-208ENST00000555301 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.2■□□□□ 0.18
CHD8-208ENST00000555301 DUSP11O75319 330 aaKnown RBP16.2■□□□□ 0.18
CHD8-208ENST00000555301 ARIH2O95376 493 aa16.2■□□□□ 0.18
CHD8-208ENST00000555301 SMPD1P17405 629 aa16.2■□□□□ 0.18
CHD8-208ENST00000555301 ATP2B1P20020 1258 aa16.2■□□□□ 0.18
CHD8-208ENST00000555301 NUCB2P80303 420 aa16.2■□□□□ 0.18
CHD8-208ENST00000555301 SEMA3FQ13275 785 aa16.2■□□□□ 0.18
CHD8-208ENST00000555301 TTC38Q5R3I4 469 aa16.2■□□□□ 0.18
CHD8-208ENST00000555301 MYSM1Q5VVJ2 828 aa16.2■□□□□ 0.18
CHD8-208ENST00000555301 LENG9Q96B70 501 aa16.2■□□□□ 0.18
CHD8-208ENST00000555301 GNEQ9Y223 722 aaKnown RBP16.2■□□□□ 0.18
CHD8-208ENST00000555301 BRD1O95696 1058 aa16.19■□□□□ 0.18
CHD8-208ENST00000555301 F13A1P00488 732 aa16.19■□□□□ 0.18
CHD8-208ENST00000555301 MYCP01106 439 aaPredicted RBP16.19■□□□□ 0.18
CHD8-208ENST00000555301 GH1P01241 217 aa16.19■□□□□ 0.18
CHD8-208ENST00000555301 ARP10275 920 aa16.19■□□□□ 0.18
CHD8-208ENST00000555301 UBA1P22314 1058 aaKnown RBP16.19■□□□□ 0.18
CHD8-208ENST00000555301 DDIT3P35638 169 aa16.19■□□□□ 0.18
CHD8-208ENST00000555301 PKP1Q13835 747 aa16.19■□□□□ 0.18
CHD8-208ENST00000555301 LY6KQ17RY6 165 aa16.19■□□□□ 0.18
CHD8-208ENST00000555301 ZNF577Q9BSK1 485 aa16.19■□□□□ 0.18
CHD8-208ENST00000555301 TMEM106CQ9BVX2 250 aa16.19■□□□□ 0.18
CHD8-208ENST00000555301 SPC25Q9HBM1 224 aa16.19■□□□□ 0.18
CHD8-208ENST00000555301 AGO4Q9HCK5 861 aaKnown RBP16.19■□□□□ 0.18
CHD8-208ENST00000555301 TBC1D22BQ9NU19 505 aa16.19■□□□□ 0.18
CHD8-208ENST00000555301 HTTP42858 3142 aa16.18■□□□□ 0.18
CHD8-208ENST00000555301 IPO5O00410 1097 aaKnown RBP16.18■□□□□ 0.18
CHD8-208ENST00000555301 TBX3O15119 743 aa16.18■□□□□ 0.18
CHD8-208ENST00000555301 SLC37A4O43826 429 aa16.18■□□□□ 0.18
CHD8-208ENST00000555301 NEMFO60524 1076 aa16.18■□□□□ 0.18
CHD8-208ENST00000555301 GJB1P08034 283 aa16.18■□□□□ 0.18
CHD8-208ENST00000555301 KCNA2P16389 499 aa16.18■□□□□ 0.18
CHD8-208ENST00000555301 CAPN2P17655 700 aa16.18■□□□□ 0.18
CHD8-208ENST00000555301 TOB1P50616 345 aaPredicted RBP16.18■□□□□ 0.18
CHD8-208ENST00000555301 SP2Q02086 613 aa16.18■□□□□ 0.18
CHD8-208ENST00000555301 LAMC2Q13753 1193 aa16.18■□□□□ 0.18
CHD8-208ENST00000555301 LHX8Q68G74 356 aa16.18■□□□□ 0.18
CHD8-208ENST00000555301 TLK2Q86UE8 772 aa16.18■□□□□ 0.18
CHD8-208ENST00000555301 DHX37Q8IY37 1157 aaKnown RBP16.18■□□□□ 0.18
CHD8-208ENST00000555301 FAM20AQ96MK3 541 aa16.18■□□□□ 0.18
CHD8-208ENST00000555301 SDF4Q9BRK5 362 aa16.18■□□□□ 0.18
CHD8-208ENST00000555301 AP5M1Q9H0R1 490 aa16.18■□□□□ 0.18
CHD8-208ENST00000555301 MLXIPQ9HAP2 919 aa16.18■□□□□ 0.18
CHD8-208ENST00000555301 XPNPEP3Q9NQH7 507 aa16.18■□□□□ 0.18
CHD8-208ENST00000555301 CIZ1Q9ULV3 898 aaPredicted RBP16.18■□□□□ 0.18
CHD8-208ENST00000555301 NFASCO94856 1347 aa16.18■□□□□ 0.18
CHD8-208ENST00000555301 MSH4O15457 936 aa16.17■□□□□ 0.18
CHD8-208ENST00000555301 DYNC1LI2O43237 492 aaPredicted RBP16.17■□□□□ 0.18
CHD8-208ENST00000555301 ADCY6O43306 1168 aa16.17■□□□□ 0.18
CHD8-208ENST00000555301 MARCH6O60337 910 aa16.17■□□□□ 0.18
CHD8-208ENST00000555301 ATP9AO75110 1047 aa16.17■□□□□ 0.18
CHD8-208ENST00000555301 BAG4O95429 457 aaKnown RBP16.17■□□□□ 0.18
CHD8-208ENST00000555301 GGPS1O95749 300 aa16.17■□□□□ 0.18
CHD8-208ENST00000555301 MCM7P33993 719 aa16.17■□□□□ 0.18
CHD8-208ENST00000555301 GJA9P57773 515 aa16.17■□□□□ 0.18
CHD8-208ENST00000555301 ZNF174Q15697 407 aa16.17■□□□□ 0.18
CHD8-208ENST00000555301 CELF3Q5SZQ8 465 aaKnown RBP16.17■□□□□ 0.18
CHD8-208ENST00000555301 FOXD4L5Q5VV16 416 aaPredicted RBP16.17■□□□□ 0.18
CHD8-208ENST00000555301 ANO1Q5XXA6 986 aa16.17■□□□□ 0.18
CHD8-208ENST00000555301 METTL7BQ6UX53 244 aa16.17■□□□□ 0.18
CHD8-208ENST00000555301 POTEDQ86YR6 584 aa16.17■□□□□ 0.18
CHD8-208ENST00000555301 SLFN12Q8IYM2 578 aa16.17■□□□□ 0.18
CHD8-208ENST00000555301 OR6J1Q8NGC5 347 aa16.17■□□□□ 0.18
CHD8-208ENST00000555301 ETNPPLQ8TBG4 499 aa16.17■□□□□ 0.18
CHD8-208ENST00000555301 FOXD4L4Q8WXT5 416 aaPredicted RBP16.17■□□□□ 0.18
CHD8-208ENST00000555301 EMID1Q96A84 441 aaPredicted RBP16.17■□□□□ 0.18
CHD8-208ENST00000555301 DEFB118Q96PH6 123 aa16.17■□□□□ 0.18
CHD8-208ENST00000555301 RIT2Q99578 217 aa16.17■□□□□ 0.18
CHD8-208ENST00000555301 KCNMB3Q9NPA1 279 aa16.17■□□□□ 0.18
CHD8-208ENST00000555301 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.17■□□□□ 0.18
CHD8-208ENST00000555301 PKD2L1Q9P0L9 805 aa16.17■□□□□ 0.18
CHD8-208ENST00000555301 TCEAL9Q9UHQ7 104 aa16.17■□□□□ 0.18
CHD8-208ENST00000555301 ATP6V1DQ9Y5K8 247 aa16.17■□□□□ 0.18
CHD8-208ENST00000555301 LRRC37A2A6NM11 1700 aa16.16■□□□□ 0.18
CHD8-208ENST00000555301 WNT7AO00755 349 aa16.16■□□□□ 0.18
CHD8-208ENST00000555301 SGPL1O95470 568 aa16.16■□□□□ 0.18
CHD8-208ENST00000555301 BMP15O95972 392 aa16.16■□□□□ 0.18
CHD8-208ENST00000555301 NKX3-2P78367 333 aa16.16■□□□□ 0.18
CHD8-208ENST00000555301 ARHGAP1Q07960 439 aa16.16■□□□□ 0.18
CHD8-208ENST00000555301 ITGB3BPQ13352 177 aaPredicted RBP16.16■□□□□ 0.18
CHD8-208ENST00000555301 CALCRLQ16602 461 aa16.16■□□□□ 0.18
CHD8-208ENST00000555301 BRDTQ58F21 947 aaPredicted RBP16.16■□□□□ 0.18
CHD8-208ENST00000555301 TMEM63BQ5T3F8 832 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms