RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 NOTOA8MTQ0 251 aa7.48□□□□□ -1.21
CKS1BP1-201ENST00000555221 TRAF5O00463 557 aa7.48□□□□□ -1.21
CKS1BP1-201ENST00000555221 KRIT1O00522 736 aa7.48□□□□□ -1.21
CKS1BP1-201ENST00000555221 MAFKO60675 156 aa7.48□□□□□ -1.21
CKS1BP1-201ENST00000555221 ADAM23O75077 832 aa7.48□□□□□ -1.21
CKS1BP1-201ENST00000555221 PDE6AP16499 860 aa7.48□□□□□ -1.21
CKS1BP1-201ENST00000555221 BPIP17213 487 aa7.48□□□□□ -1.21
CKS1BP1-201ENST00000555221 ARL4AP40617 200 aa7.48□□□□□ -1.21
CKS1BP1-201ENST00000555221 CDKN1CP49918 316 aaPredicted RBP7.48□□□□□ -1.21
CKS1BP1-201ENST00000555221 MECP2P51608 486 aaKnown RBP7.48□□□□□ -1.21
CKS1BP1-201ENST00000555221 CYP4F8P98187 520 aa7.48□□□□□ -1.21
CKS1BP1-201ENST00000555221 OCRLQ01968 901 aa7.48□□□□□ -1.21
CKS1BP1-201ENST00000555221 LRP8Q14114 963 aa7.48□□□□□ -1.21
CKS1BP1-201ENST00000555221 GPR19Q15760 415 aa7.48□□□□□ -1.21
CKS1BP1-201ENST00000555221 RNF219Q5W0B1 726 aaPredicted RBP7.48□□□□□ -1.21
CKS1BP1-201ENST00000555221 OTOP3Q7RTS5 596 aa7.48□□□□□ -1.21
CKS1BP1-201ENST00000555221 WDR66Q8TBY9 1149 aa7.48□□□□□ -1.21
CKS1BP1-201ENST00000555221 MYLIPQ8WY64 445 aa7.48□□□□□ -1.21
CKS1BP1-201ENST00000555221 C19orf73Q9NVV2 129 aa7.48□□□□□ -1.21
CKS1BP1-201ENST00000555221 GPR160Q9UJ42 338 aa7.48□□□□□ -1.21
CKS1BP1-201ENST00000555221 CBLCQ9ULV8 474 aa7.48□□□□□ -1.21
CKS1BP1-201ENST00000555221 PSPNO60542 156 aa7.47□□□□□ -1.21
CKS1BP1-201ENST00000555221 RAB11FIP3O75154 756 aa7.47□□□□□ -1.21
CKS1BP1-201ENST00000555221 RNASE1P07998 156 aaKnown RBP7.47□□□□□ -1.21
CKS1BP1-201ENST00000555221 MSL3P1P0C860 447 aa7.47□□□□□ -1.21
CKS1BP1-201ENST00000555221 TACR1P25103 407 aa7.47□□□□□ -1.21
CKS1BP1-201ENST00000555221 IL2P60568 153 aa7.47□□□□□ -1.21
CKS1BP1-201ENST00000555221 DSG1Q02413 1049 aa7.47□□□□□ -1.21
CKS1BP1-201ENST00000555221 ZNF792Q3KQV3 632 aa7.47□□□□□ -1.21
CKS1BP1-201ENST00000555221 HABP4Q5JVS0 413 aaKnown RBP7.47□□□□□ -1.21
CKS1BP1-201ENST00000555221 ZMYM1Q5SVZ6 1142 aa7.47□□□□□ -1.21
CKS1BP1-201ENST00000555221 BICRALQ6AI39 1079 aa7.47□□□□□ -1.21
CKS1BP1-201ENST00000555221 NLRX1Q86UT6 975 aa7.47□□□□□ -1.21
CKS1BP1-201ENST00000555221 FERMT3Q86UX7 667 aa7.47□□□□□ -1.21
CKS1BP1-201ENST00000555221 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.47□□□□□ -1.21
CKS1BP1-201ENST00000555221 C19orf44Q9H6X5 657 aa7.47□□□□□ -1.21
CKS1BP1-201ENST00000555221 SP110Q9HB58 689 aa7.47□□□□□ -1.21
CKS1BP1-201ENST00000555221 CRTAC1Q9NQ79 661 aa7.47□□□□□ -1.21
CKS1BP1-201ENST00000555221 CTNND2Q9UQB3 1225 aa7.47□□□□□ -1.21
CKS1BP1-201ENST00000555221 APOBEC2Q9Y235 224 aaKnown RBP7.47□□□□□ -1.21
CKS1BP1-201ENST00000555221 PTPDC1A2A3K4 754 aa7.46□□□□□ -1.22
CKS1BP1-201ENST00000555221 ZNF891A8MT65 544 aaPredicted RBP7.46□□□□□ -1.22
CKS1BP1-201ENST00000555221 ZNF561-AS1K7EIQ3 104 aa7.46□□□□□ -1.22
CKS1BP1-201ENST00000555221 PNLIPP16233 465 aa7.46□□□□□ -1.22
CKS1BP1-201ENST00000555221 SLC6A11P48066 632 aa7.46□□□□□ -1.22
CKS1BP1-201ENST00000555221 ERVFC1P60507 584 aa7.46□□□□□ -1.22
CKS1BP1-201ENST00000555221 STAT4Q14765 748 aa7.46□□□□□ -1.22
CKS1BP1-201ENST00000555221 CYP4F22Q6NT55 531 aa7.46□□□□□ -1.22
CKS1BP1-201ENST00000555221 ARHGAP36Q6ZRI8 547 aa7.46□□□□□ -1.22
CKS1BP1-201ENST00000555221 EP400NLQ6ZTU2 488 aa7.46□□□□□ -1.22
CKS1BP1-201ENST00000555221 OTOP1Q7RTM1 612 aa7.46□□□□□ -1.22
CKS1BP1-201ENST00000555221 NECAB2Q7Z6G3 386 aa7.46□□□□□ -1.22
CKS1BP1-201ENST00000555221 DCP2Q8IU60 420 aaKnown RBP7.46□□□□□ -1.22
CKS1BP1-201ENST00000555221 NXPE1Q8N323 547 aa7.46□□□□□ -1.22
CKS1BP1-201ENST00000555221 NETO2Q8NC67 525 aa7.46□□□□□ -1.22
CKS1BP1-201ENST00000555221 SMC1BQ8NDV3 1235 aa7.46□□□□□ -1.22
CKS1BP1-201ENST00000555221 PIP4K2CQ8TBX8 421 aa7.46□□□□□ -1.22
CKS1BP1-201ENST00000555221 CEP89Q96ST8 783 aa7.46□□□□□ -1.22
CKS1BP1-201ENST00000555221 BOCQ9BWV1 1114 aa7.46□□□□□ -1.22
CKS1BP1-201ENST00000555221 RC3H2Q9HBD1 1191 aaKnown RBP7.46□□□□□ -1.22
CKS1BP1-201ENST00000555221 METTL14Q9HCE5 456 aaKnown RBP7.46□□□□□ -1.22
CKS1BP1-201ENST00000555221 SLC6A20Q9NP91 592 aa7.46□□□□□ -1.22
CKS1BP1-201ENST00000555221 SLC12A8A0AV02 714 aa7.45□□□□□ -1.22
CKS1BP1-201ENST00000555221 GPR39O43194 453 aa7.45□□□□□ -1.22
CKS1BP1-201ENST00000555221 NTRK1P04629 796 aa7.45□□□□□ -1.22
CKS1BP1-201ENST00000555221 PDGFRBP09619 1106 aa7.45□□□□□ -1.22
CKS1BP1-201ENST00000555221 GLI4P10075 376 aa7.45□□□□□ -1.22
CKS1BP1-201ENST00000555221 COL6A2P12110 1019 aa7.45□□□□□ -1.22
CKS1BP1-201ENST00000555221 KRT15P19012 456 aa7.45□□□□□ -1.22
CKS1BP1-201ENST00000555221 AFMP43652 599 aa7.45□□□□□ -1.22
CKS1BP1-201ENST00000555221 LSSP48449 732 aa7.45□□□□□ -1.22
CKS1BP1-201ENST00000555221 SKOR2Q2VWA4 1001 aaPredicted RBP7.45□□□□□ -1.22
CKS1BP1-201ENST00000555221 HHIPL2Q6UWX4 724 aa7.45□□□□□ -1.22
CKS1BP1-201ENST00000555221 C11orf74Q86VG3 221 aa7.45□□□□□ -1.22
CKS1BP1-201ENST00000555221 OSTM1Q86WC4 334 aa7.45□□□□□ -1.22
CKS1BP1-201ENST00000555221 SPATS2Q86XZ4 545 aaKnown RBP7.45□□□□□ -1.22
CKS1BP1-201ENST00000555221 NLGN4XQ8N0W4 816 aa7.45□□□□□ -1.22
CKS1BP1-201ENST00000555221 SCYL1Q96KG9 808 aa7.45□□□□□ -1.22
CKS1BP1-201ENST00000555221 AP5M1Q9H0R1 490 aa7.45□□□□□ -1.22
CKS1BP1-201ENST00000555221 FBLN5Q9UBX5 448 aa7.45□□□□□ -1.22
CKS1BP1-201ENST00000555221 NUDT5Q9UKK9 219 aa7.45□□□□□ -1.22
CKS1BP1-201ENST00000555221 DSEQ9UL01 958 aa7.45□□□□□ -1.22
CKS1BP1-201ENST00000555221 NEMP1O14524 444 aa7.44□□□□□ -1.22
CKS1BP1-201ENST00000555221 HGSO14964 777 aaPredicted RBP7.44□□□□□ -1.22
CKS1BP1-201ENST00000555221 SRGAP3O43295 1099 aa7.44□□□□□ -1.22
CKS1BP1-201ENST00000555221 ADAMTS4O75173 837 aa7.44□□□□□ -1.22
CKS1BP1-201ENST00000555221 FKBP9O95302 570 aa7.44□□□□□ -1.22
CKS1BP1-201ENST00000555221 TRHRP34981 398 aaPredicted RBP7.44□□□□□ -1.22
CKS1BP1-201ENST00000555221 KPNA1P52294 538 aaPredicted RBP7.44□□□□□ -1.22
CKS1BP1-201ENST00000555221 JAM2P57087 298 aa7.44□□□□□ -1.22
CKS1BP1-201ENST00000555221 KIR3DS1Q14943 382 aa7.44□□□□□ -1.22
CKS1BP1-201ENST00000555221 TIGD5Q53EQ6 642 aa7.44□□□□□ -1.22
CKS1BP1-201ENST00000555221 FIGNQ5HY92 759 aa7.44□□□□□ -1.22
CKS1BP1-201ENST00000555221 EMC4Q5J8M3 183 aa7.44□□□□□ -1.22
CKS1BP1-201ENST00000555221 STEAP3Q658P3 488 aa7.44□□□□□ -1.22
CKS1BP1-201ENST00000555221 FKBP9P1Q75LS8 142 aa7.44□□□□□ -1.22
CKS1BP1-201ENST00000555221 FLAD1Q8NFF5 587 aa7.44□□□□□ -1.22
CKS1BP1-201ENST00000555221 UHMK1Q8TAS1 419 aaKnown RBP7.44□□□□□ -1.22
CKS1BP1-201ENST00000555221 ABHD4Q8TB40 342 aa7.44□□□□□ -1.22
CKS1BP1-201ENST00000555221 PHOSPHO1Q8TCT1 267 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms