RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 DDX11Q96FC9 970 aa8.15□□□□□ -1.1
VRK1-203ENST00000555067 TSC22D4Q9Y3Q8 395 aa8.15□□□□□ -1.1
VRK1-203ENST00000555067 B2RBV5 119 aa8.14□□□□□ -1.11
VRK1-203ENST00000555067 TCF3P15923 654 aa8.14□□□□□ -1.11
VRK1-203ENST00000555067 FPR2P25090 351 aa8.14□□□□□ -1.11
VRK1-203ENST00000555067 RPL13P26373 211 aaKnown RBP8.14□□□□□ -1.11
VRK1-203ENST00000555067 ECI1P42126 302 aa8.14□□□□□ -1.11
VRK1-203ENST00000555067 KIAA2012Q0VF49 1180 aa8.14□□□□□ -1.11
VRK1-203ENST00000555067 SMAD4Q13485 552 aaKnown RBP8.14□□□□□ -1.11
VRK1-203ENST00000555067 FAM26FQ5R3K3 315 aa8.14□□□□□ -1.11
VRK1-203ENST00000555067 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.14□□□□□ -1.11
VRK1-203ENST00000555067 EPN3Q9H201 632 aa8.14□□□□□ -1.11
VRK1-203ENST00000555067 X6R8D5 127 aa8.14□□□□□ -1.11
VRK1-203ENST00000555067 TBX1O43435 398 aa8.13□□□□□ -1.11
VRK1-203ENST00000555067 THBS2P35442 1172 aa8.13□□□□□ -1.11
VRK1-203ENST00000555067 CEP68Q76N32 757 aa8.13□□□□□ -1.11
VRK1-203ENST00000555067 CCDC103Q8IW40 242 aa8.13□□□□□ -1.11
VRK1-203ENST00000555067 SH3RF3Q8TEJ3 882 aaPredicted RBP8.13□□□□□ -1.11
VRK1-203ENST00000555067 TRMT2BQ96GJ1 504 aaKnown RBP8.13□□□□□ -1.11
VRK1-203ENST00000555067 GORASP1Q9BQQ3 440 aa8.13□□□□□ -1.11
VRK1-203ENST00000555067 C11orf84Q9BUA3 381 aaPredicted RBP8.13□□□□□ -1.11
VRK1-203ENST00000555067 SLITRK6Q9H5Y7 841 aa8.13□□□□□ -1.11
VRK1-203ENST00000555067 NGRNQ9NPE2 291 aaKnown RBP8.13□□□□□ -1.11
VRK1-203ENST00000555067 ST6GALNAC2Q9UJ37 374 aa8.13□□□□□ -1.11
VRK1-203ENST00000555067 COA3Q9Y2R0 106 aaPredicted RBP8.13□□□□□ -1.11
VRK1-203ENST00000555067 FGRP09769 529 aa8.12□□□□□ -1.11
VRK1-203ENST00000555067 CHRNA2Q15822 529 aa8.12□□□□□ -1.11
VRK1-203ENST00000555067 NLRP10Q86W26 655 aa8.12□□□□□ -1.11
VRK1-203ENST00000555067 FAM126BQ8IXS8 530 aa8.12□□□□□ -1.11
VRK1-203ENST00000555067 KYQ8NBH2 561 aa8.12□□□□□ -1.11
VRK1-203ENST00000555067 KREMEN2Q8NCW0 462 aa8.12□□□□□ -1.11
VRK1-203ENST00000555067 TMEM169Q96HH4 297 aa8.12□□□□□ -1.11
VRK1-203ENST00000555067 TMEFF2Q9UIK5 374 aaPredicted RBP8.12□□□□□ -1.11
VRK1-203ENST00000555067 ZNF652Q9Y2D9 606 aa8.12□□□□□ -1.11
VRK1-203ENST00000555067 MROH6A6NGR9 719 aa8.11□□□□□ -1.11
VRK1-203ENST00000555067 AGRPO00253 132 aa8.11□□□□□ -1.11
VRK1-203ENST00000555067 LTBRP36941 435 aa8.11□□□□□ -1.11
VRK1-203ENST00000555067 ETFBP38117 255 aa8.11□□□□□ -1.11
VRK1-203ENST00000555067 BCL6P41182 706 aa8.11□□□□□ -1.11
VRK1-203ENST00000555067 KCNJ6P48051 423 aa8.11□□□□□ -1.11
VRK1-203ENST00000555067 GFRA1P56159 465 aa8.11□□□□□ -1.11
VRK1-203ENST00000555067 MRM1Q6IN84 353 aaKnown RBP8.11□□□□□ -1.11
VRK1-203ENST00000555067 CD300LDQ6UXZ3 194 aa8.11□□□□□ -1.11
VRK1-203ENST00000555067 EEPD1Q7L9B9 569 aa8.11□□□□□ -1.11
VRK1-203ENST00000555067 MILR1Q7Z6M3 343 aa8.11□□□□□ -1.11
VRK1-203ENST00000555067 PPIL6Q8IXY8 311 aa8.11□□□□□ -1.11
VRK1-203ENST00000555067 TTLL6Q8N841 843 aa8.11□□□□□ -1.11
VRK1-203ENST00000555067 H7BY64 318 aa8.1□□□□□ -1.11
VRK1-203ENST00000555067 ARID5AQ03989 594 aa8.1□□□□□ -1.11
VRK1-203ENST00000555067 GLB1LQ6UWU2 654 aa8.1□□□□□ -1.11
VRK1-203ENST00000555067 LIMS2Q7Z4I7 341 aa8.1□□□□□ -1.11
VRK1-203ENST00000555067 ZFPM1Q8IX07 1006 aa8.1□□□□□ -1.11
VRK1-203ENST00000555067 RCBTB1Q8NDN9 531 aa8.1□□□□□ -1.11
VRK1-203ENST00000555067 ZNF408Q9H9D4 720 aa8.1□□□□□ -1.11
VRK1-203ENST00000555067 PRR31Q5SQ13 230 aa8.09□□□□□ -1.11
VRK1-203ENST00000555067 BORAQ6PGQ7 559 aa8.09□□□□□ -1.11
VRK1-203ENST00000555067 MICAL1Q8TDZ2 1067 aa8.09□□□□□ -1.11
VRK1-203ENST00000555067 KISS1RQ969F8 398 aaPredicted RBP8.09□□□□□ -1.11
VRK1-203ENST00000555067 TINF2Q9BSI4 451 aa8.09□□□□□ -1.11
VRK1-203ENST00000555067 YIPF4Q9BSR8 244 aa8.09□□□□□ -1.11
VRK1-203ENST00000555067 ARNTLO00327 626 aa8.08□□□□□ -1.12
VRK1-203ENST00000555067 ITGA1P56199 1179 aa8.08□□□□□ -1.12
VRK1-203ENST00000555067 LSAMPQ13449 338 aa8.08□□□□□ -1.12
VRK1-203ENST00000555067 PRSS53Q2L4Q9 553 aa8.08□□□□□ -1.12
VRK1-203ENST00000555067 SLC10A6Q3KNW5 377 aa8.08□□□□□ -1.12
VRK1-203ENST00000555067 FAM26EQ8N5C1 309 aa8.08□□□□□ -1.12
VRK1-203ENST00000555067 TMEM145Q8NBT3 493 aa8.08□□□□□ -1.12
VRK1-203ENST00000555067 C1orf159Q96HA4 380 aa8.08□□□□□ -1.12
VRK1-203ENST00000555067 SYT3Q9BQG1 590 aa8.08□□□□□ -1.12
VRK1-203ENST00000555067 ZNF747Q9BV97 191 aa8.08□□□□□ -1.12
VRK1-203ENST00000555067 CD248Q9HCU0 757 aa8.08□□□□□ -1.12
VRK1-203ENST00000555067 R3HCC1Q9Y3T6 440 aaKnown RBP8.08□□□□□ -1.12
VRK1-203ENST00000555067 HGSO14964 777 aaPredicted RBP8.07□□□□□ -1.12
VRK1-203ENST00000555067 FZD7O75084 574 aa8.07□□□□□ -1.12
VRK1-203ENST00000555067 GJB6O95452 261 aa8.07□□□□□ -1.12
VRK1-203ENST00000555067 NKX3-2P78367 333 aa8.07□□□□□ -1.12
VRK1-203ENST00000555067 ICAM4Q14773 271 aa8.07□□□□□ -1.12
VRK1-203ENST00000555067 SF1Q15637 639 aaKnown RBP8.07□□□□□ -1.12
VRK1-203ENST00000555067 FAM124AQ86V42 546 aa8.07□□□□□ -1.12
VRK1-203ENST00000555067 CHAMP1Q96JM3 812 aa8.07□□□□□ -1.12
VRK1-203ENST00000555067 PCED1AQ9H1Q7 454 aa8.07□□□□□ -1.12
VRK1-203ENST00000555067 PPP4R1LQ9P1A2 415 aa8.07□□□□□ -1.12
VRK1-203ENST00000555067 FBXL7Q9UJT9 491 aa8.07□□□□□ -1.12
VRK1-203ENST00000555067 PCDHA2Q9Y5H9 948 aa8.07□□□□□ -1.12
VRK1-203ENST00000555067 ZNF536O15090 1300 aa8.06□□□□□ -1.12
VRK1-203ENST00000555067 MAP4K2Q12851 820 aa8.06□□□□□ -1.12
VRK1-203ENST00000555067 EMC4Q5J8M3 183 aa8.06□□□□□ -1.12
VRK1-203ENST00000555067 SLC35F1Q5T1Q4 408 aa8.06□□□□□ -1.12
VRK1-203ENST00000555067 MCTP2Q6DN12 878 aa8.06□□□□□ -1.12
VRK1-203ENST00000555067 TXNDC5Q8NBS9 432 aaKnown RBP8.06□□□□□ -1.12
VRK1-203ENST00000555067 KCTD13Q8WZ19 329 aa8.06□□□□□ -1.12
VRK1-203ENST00000555067 EPB41L1Q9H4G0 881 aa8.06□□□□□ -1.12
VRK1-203ENST00000555067 USP35Q9P2H5 1018 aa8.06□□□□□ -1.12
VRK1-203ENST00000555067 NPFFR2Q9Y5X5 522 aa8.06□□□□□ -1.12
VRK1-203ENST00000555067 CAPNS1P04632 268 aa8.05□□□□□ -1.12
VRK1-203ENST00000555067 STAT5AP42229 794 aa8.05□□□□□ -1.12
VRK1-203ENST00000555067 PPP2R2AP63151 447 aa8.05□□□□□ -1.12
VRK1-203ENST00000555067 CR1LQ2VPA4 569 aa8.05□□□□□ -1.12
VRK1-203ENST00000555067 CRB2Q5IJ48 1285 aa8.05□□□□□ -1.12
VRK1-203ENST00000555067 STEAP3Q658P3 488 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms