RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 SUN1O94901 812 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 GOLGA8HP0CJ92 632 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 HSPA2P54652 639 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 POLR2FP61218 127 aaKnown RBP7.44□□□□□ -1.22
SYNE2-216ENST00000555002 BASP1P80723 227 aaKnown RBP7.44□□□□□ -1.22
SYNE2-216ENST00000555002 FBXO11Q86XK2 927 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 IFNA8P32881 189 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 STXBP2Q15833 593 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 KRT40Q6A162 431 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 CDC37L1Q7L3B6 337 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 DDX53Q86TM3 631 aaKnown RBP7.44□□□□□ -1.22
SYNE2-216ENST00000555002 GIMAP4Q9NUV9 329 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 FGFR1OP2Q9NVK5 253 aa7.44□□□□□ -1.22
SYNE2-216ENST00000555002 MSH2P43246 934 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 ABCB5Q2M3G0 1257 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 THEMIS2Q5TEJ8 643 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 DNAJC24Q6P3W2 148 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 HPCAL4Q9UM19 191 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 SOS1Q07889 1333 aaPredicted RBP7.43□□□□□ -1.22
SYNE2-216ENST00000555002 ADGRF5Q8IZF2 1346 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 LRRN2O75325 713 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 SKIP12755 728 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 MRPL28Q13084 256 aaKnown RBP7.43□□□□□ -1.22
SYNE2-216ENST00000555002 CDO1Q16878 200 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 ACCSLQ4AC99 568 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 ZFP42Q96MM3 310 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 CASS4Q9NQ75 786 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 SERPIND1P05546 499 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 BAG6P46379 1132 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 LMNB2Q03252 620 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 C10orf76Q5T2E6 689 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 LRCH2Q5VUJ6 765 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 RNF207Q6ZRF8 634 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 YAF2Q8IY57 180 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 BBOF1Q8ND07 529 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.43□□□□□ -1.22
SYNE2-216ENST00000555002 EFCAB5A4FU69 1503 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 ANKRD36BQ8N2N9 1353 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 DRP2Q13474 957 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 FAM133BQ5BKY9 247 aaKnown RBP7.43□□□□□ -1.22
SYNE2-216ENST00000555002 TRIM45Q9H8W5 580 aaPredicted RBP7.43□□□□□ -1.22
SYNE2-216ENST00000555002 PDE8AO60658 829 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 GDF11O95390 407 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 KLC2Q9H0B6 622 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 ING2Q9H160 280 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 STRIP2Q9ULQ0 834 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 GOLGA8KD6RF30 607 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 MT-ND3P03897 115 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 HSPA6P17066 643 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 MECOMQ03112 1051 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 ODR4Q5SWX8 454 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 DCAF5Q96JK2 942 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 TBK1Q9UHD2 729 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 SCINQ9Y6U3 715 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 PPARAQ07869 468 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 GRAMD1BQ3KR37 738 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 CC2D2BQ6DHV5 1058 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 CCDC84Q86UT8 332 aaPredicted RBP7.43□□□□□ -1.22
SYNE2-216ENST00000555002 TBC1D22AQ8WUA7 517 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 MFAP3P55082 362 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 ANGPT1Q15389 498 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 CATSPER3Q86XQ3 398 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 TEX9Q8N6V9 391 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 ATP8A2Q9NTI2 1148 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 RNMTO43148 476 aaKnown RBP7.43□□□□□ -1.22
SYNE2-216ENST00000555002 SLCO1A2P46721 670 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 TAF1BQ53T94 588 aaPredicted RBP7.43□□□□□ -1.22
SYNE2-216ENST00000555002 CEP85Q6P2H3 762 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 DSTYKQ6XUX3 929 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 SCN4BQ8IWT1 228 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 VMP1Q96GC9 406 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 PALMDQ9NP74 551 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 KMT5AQ9NQR1 393 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 CHCHD3Q9NX63 227 aaKnown RBP7.43□□□□□ -1.22
SYNE2-216ENST00000555002 L3MBTL1Q9Y468 752 aa7.43□□□□□ -1.22
SYNE2-216ENST00000555002 IGF1RP08069 1367 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 EIF3CLB5ME19 914 aaKnown RBP7.42□□□□□ -1.22
SYNE2-216ENST00000555002 TAC1P20366 129 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 CHMLP26374 656 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 BBS9Q3SYG4 887 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 HSP90AA5PQ58FG0 334 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 LRRC37BQ96QE4 947 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 EIF3CQ99613 913 aaKnown RBP7.42□□□□□ -1.22
SYNE2-216ENST00000555002 TRPC7Q9HCX4 862 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 DENND3A2RUS2 1198 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 SRGAP2CP0DJJ0 459 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 RASSF7Q02833 373 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 EIF4A2Q14240 407 aaKnown RBP7.42□□□□□ -1.22
SYNE2-216ENST00000555002 ARL13BQ3SXY8 428 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 PDXDC1Q6P996 788 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 PGBD3Q8N328 593 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 CCDC197Q8NCU1 140 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 SLC17A8Q8NDX2 589 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 NT5C1BQ96P26 610 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 GTSE1Q9NYZ3 720 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 RPN1P04843 607 aaKnown RBP7.42□□□□□ -1.22
SYNE2-216ENST00000555002 GUCY2DQ02846 1103 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 ATL3Q6DD88 541 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 OR6B2Q6IFH4 312 aa7.42□□□□□ -1.22
SYNE2-216ENST00000555002 PLEKHM3Q6ZWE6 761 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms