RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 MRVI1Q9Y6F6 885 aa18.65■□□□□ 0.58
SPTLC2-203ENST00000554901 NKRFO15226 690 aaKnown RBP eCLIP18.64■□□□□ 0.58
SPTLC2-203ENST00000554901 SEPT4O43236 478 aa18.64■□□□□ 0.58
SPTLC2-203ENST00000554901 AKR1A1P14550 325 aa18.64■□□□□ 0.58
SPTLC2-203ENST00000554901 CCDC144BQ3MJ40 725 aa18.64■□□□□ 0.58
SPTLC2-203ENST00000554901 CCDC62Q6P9F0 684 aa18.64■□□□□ 0.58
SPTLC2-203ENST00000554901 CYP2W1Q8TAV3 490 aa18.64■□□□□ 0.58
SPTLC2-203ENST00000554901 ARMC5Q96C12 935 aa18.64■□□□□ 0.58
SPTLC2-203ENST00000554901 LAD1O00515 517 aa18.64■□□□□ 0.57
SPTLC2-203ENST00000554901 NEMFO60524 1076 aa18.64■□□□□ 0.57
SPTLC2-203ENST00000554901 MSCO60682 206 aa18.64■□□□□ 0.57
SPTLC2-203ENST00000554901 PRAMEF19Q5SWL8 479 aa18.64■□□□□ 0.57
SPTLC2-203ENST00000554901 FAM20AQ96MK3 541 aa18.64■□□□□ 0.57
SPTLC2-203ENST00000554901 ZNF396Q96N95 335 aaPredicted RBP18.64■□□□□ 0.57
SPTLC2-203ENST00000554901 HMX1Q9NP08 348 aaPredicted RBP18.64■□□□□ 0.57
SPTLC2-203ENST00000554901 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.64■□□□□ 0.57
SPTLC2-203ENST00000554901 DDX41Q9UJV9 622 aaKnown RBP18.64■□□□□ 0.57
SPTLC2-203ENST00000554901 CEP131Q9UPN4 1083 aa18.64■□□□□ 0.57
SPTLC2-203ENST00000554901 KIAA1217Q5T5P2 1943 aa18.63■□□□□ 0.57
SPTLC2-203ENST00000554901 TXNP10599 105 aaKnown RBP18.63■□□□□ 0.57
SPTLC2-203ENST00000554901 ATP2B1P20020 1258 aa18.63■□□□□ 0.57
SPTLC2-203ENST00000554901 TRIM32Q13049 653 aa18.63■□□□□ 0.57
SPTLC2-203ENST00000554901 SEMA3FQ13275 785 aa18.63■□□□□ 0.57
SPTLC2-203ENST00000554901 NEDD9Q14511 834 aa18.63■□□□□ 0.57
SPTLC2-203ENST00000554901 DUSP28Q4G0W2 176 aa18.63■□□□□ 0.57
SPTLC2-203ENST00000554901 TRPV1Q8NER1 839 aa18.63■□□□□ 0.57
SPTLC2-203ENST00000554901 SH3TC2Q8TF17 1288 aa18.63■□□□□ 0.57
SPTLC2-203ENST00000554901 ZFP91Q96JP5 570 aaPredicted RBP18.63■□□□□ 0.57
SPTLC2-203ENST00000554901 AGO4Q9HCK5 861 aaKnown RBP18.63■□□□□ 0.57
SPTLC2-203ENST00000554901 KCNMB3Q9NPA1 279 aa18.63■□□□□ 0.57
SPTLC2-203ENST00000554901 PDGFCQ9NRA1 345 aa18.63■□□□□ 0.57
SPTLC2-203ENST00000554901 Q9Y3F1 56 aa18.63■□□□□ 0.57
SPTLC2-203ENST00000554901 PCDHB6Q9Y5E3 794 aa18.63■□□□□ 0.57
SPTLC2-203ENST00000554901 HTTP42858 3142 aa18.62■□□□□ 0.57
SPTLC2-203ENST00000554901 IPO5O00410 1097 aaKnown RBP18.62■□□□□ 0.57
SPTLC2-203ENST00000554901 SLC37A4O43826 429 aa18.62■□□□□ 0.57
SPTLC2-203ENST00000554901 ARP10275 920 aa18.62■□□□□ 0.57
SPTLC2-203ENST00000554901 MCM7P33993 719 aa18.62■□□□□ 0.57
SPTLC2-203ENST00000554901 ADCYAP1R1P41586 468 aa18.62■□□□□ 0.57
SPTLC2-203ENST00000554901 TNFAIP2Q03169 654 aa18.62■□□□□ 0.57
SPTLC2-203ENST00000554901 FOXD4L5Q5VV16 416 aaPredicted RBP18.62■□□□□ 0.57
SPTLC2-203ENST00000554901 SLFN12Q8IYM2 578 aa18.62■□□□□ 0.57
SPTLC2-203ENST00000554901 ETNPPLQ8TBG4 499 aa18.62■□□□□ 0.57
SPTLC2-203ENST00000554901 FOXD4L4Q8WXT5 416 aaPredicted RBP18.62■□□□□ 0.57
SPTLC2-203ENST00000554901 RIT2Q99578 217 aa18.62■□□□□ 0.57
SPTLC2-203ENST00000554901 ZNF577Q9BSK1 485 aa18.62■□□□□ 0.57
SPTLC2-203ENST00000554901 TBC1D22BQ9NU19 505 aa18.62■□□□□ 0.57
SPTLC2-203ENST00000554901 MORC2Q9Y6X9 1032 aaPredicted RBP18.62■□□□□ 0.57
SPTLC2-203ENST00000554901 NFASCO94856 1347 aa18.62■□□□□ 0.57
SPTLC2-203ENST00000554901 WNT7AO00755 349 aa18.61■□□□□ 0.57
SPTLC2-203ENST00000554901 MSH4O15457 936 aa18.61■□□□□ 0.57
SPTLC2-203ENST00000554901 BAG4O95429 457 aaKnown RBP18.61■□□□□ 0.57
SPTLC2-203ENST00000554901 KCNA2P16389 499 aa18.61■□□□□ 0.57
SPTLC2-203ENST00000554901 ZNF174Q15697 407 aa18.61■□□□□ 0.57
SPTLC2-203ENST00000554901 EMID1Q96A84 441 aaPredicted RBP18.61■□□□□ 0.57
SPTLC2-203ENST00000554901 ZNF333Q96JL9 665 aa18.61■□□□□ 0.57
SPTLC2-203ENST00000554901 POLR3EQ9NVU0 708 aa18.61■□□□□ 0.57
SPTLC2-203ENST00000554901 CFAP45Q9UL16 551 aa18.61■□□□□ 0.57
SPTLC2-203ENST00000554901 DUSP11O75319 330 aaKnown RBP18.6■□□□□ 0.57
SPTLC2-203ENST00000554901 ARIH2O95376 493 aa18.6■□□□□ 0.57
SPTLC2-203ENST00000554901 UBA1P22314 1058 aaKnown RBP18.6■□□□□ 0.57
SPTLC2-203ENST00000554901 CNGA1P29973 690 aa18.6■□□□□ 0.57
SPTLC2-203ENST00000554901 CALCRLQ16602 461 aa18.6■□□□□ 0.57
SPTLC2-203ENST00000554901 ANO1Q5XXA6 986 aa18.6■□□□□ 0.57
SPTLC2-203ENST00000554901 FAM173BQ6P4H8 233 aa18.6■□□□□ 0.57
SPTLC2-203ENST00000554901 POTEDQ86YR6 584 aa18.6■□□□□ 0.57
SPTLC2-203ENST00000554901 SLC5A5Q92911 643 aa18.6■□□□□ 0.57
SPTLC2-203ENST00000554901 MTMR9Q96QG7 549 aa18.6■□□□□ 0.57
SPTLC2-203ENST00000554901 SDF4Q9BRK5 362 aa18.6■□□□□ 0.57
SPTLC2-203ENST00000554901 MCOLN1Q9GZU1 580 aa18.6■□□□□ 0.57
SPTLC2-203ENST00000554901 GNEQ9Y223 722 aaKnown RBP18.6■□□□□ 0.57
SPTLC2-203ENST00000554901 GH1P01241 217 aa18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 OR52Z1P0C646 297 aa18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 RARBP10826 455 aa18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 SMPD1P17405 629 aa18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 CCND3P30281 292 aaPredicted RBP18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 PRPHP41219 470 aa18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 NASPP49321 788 aaPredicted RBP18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 PTGDRQ13258 359 aa18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 LAMC2Q13753 1193 aa18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 LY6KQ17RY6 165 aa18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 ARL6IP4Q66PJ3 421 aaKnown RBP18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 METTL7BQ6UX53 244 aa18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 PAK6Q9NQU5 681 aaPredicted RBP18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 DDX20Q9UHI6 824 aaKnown RBP18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 MARCH6O60337 910 aa18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 ATP9AO75110 1047 aa18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 CAPN2P17655 700 aa18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 NKX3-2P78367 333 aa18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 ATP2C1P98194 919 aaPredicted RBP18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 SP2Q02086 613 aa18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 NBR1Q14596 966 aa18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 SF3A1Q15459 793 aaKnown RBP18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 CELF3Q5SZQ8 465 aaKnown RBP18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 DHX37Q8IY37 1157 aaKnown RBP18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 C4orf32Q8N8J7 132 aa18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 HAS1Q92839 578 aa18.59■□□□□ 0.57
SPTLC2-203ENST00000554901 USP28Q96RU2 1077 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 119.8 ms