RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 SFMBT1Q9UHJ3 866 aa5.97□□□□□ -1.45
SCFD1-214ENST00000554819 PALD1Q9ULE6 856 aa5.97□□□□□ -1.45
SCFD1-214ENST00000554819 FAN1Q9Y2M0 1017 aa5.97□□□□□ -1.45
SCFD1-214ENST00000554819 NPIPB6E9PJ23 425 aa5.96□□□□□ -1.46
SCFD1-214ENST00000554819 IRS4O14654 1257 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-214ENST00000554819 PLD2O14939 933 aa5.96□□□□□ -1.46
SCFD1-214ENST00000554819 GSTA4O15217 222 aa5.96□□□□□ -1.46
SCFD1-214ENST00000554819 GNAT1P11488 350 aa5.96□□□□□ -1.46
SCFD1-214ENST00000554819 FBLN1P23142 703 aa5.96□□□□□ -1.46
SCFD1-214ENST00000554819 LINC00310P59036 64 aa5.96□□□□□ -1.46
SCFD1-214ENST00000554819 TRIM48Q8IWZ4 208 aa5.96□□□□□ -1.46
SCFD1-214ENST00000554819 NLGN1Q8N2Q7 840 aa5.96□□□□□ -1.46
SCFD1-214ENST00000554819 SYNPOQ8N3V7 929 aa5.96□□□□□ -1.46
SCFD1-214ENST00000554819 MAGEB10Q96LZ2 347 aaPredicted RBP5.96□□□□□ -1.46
SCFD1-214ENST00000554819 KCNJ15Q99712 375 aa5.96□□□□□ -1.46
SCFD1-214ENST00000554819 NCOA5Q9HCD5 579 aaKnown RBP5.96□□□□□ -1.46
SCFD1-214ENST00000554819 NGRNQ9NPE2 291 aaKnown RBP5.96□□□□□ -1.46
SCFD1-214ENST00000554819 TMEM260Q9NX78 707 aa5.96□□□□□ -1.46
SCFD1-214ENST00000554819 PPARGC1AQ9UBK2 798 aaKnown RBP5.96□□□□□ -1.46
SCFD1-214ENST00000554819 NDOR1Q9UHB4 597 aa5.96□□□□□ -1.46
SCFD1-214ENST00000554819 KCTD3Q9Y597 815 aa5.96□□□□□ -1.46
SCFD1-214ENST00000554819 PCDHA8Q9Y5H6 950 aa5.96□□□□□ -1.46
SCFD1-214ENST00000554819 KCNQ2O43526 872 aa5.95□□□□□ -1.46
SCFD1-214ENST00000554819 PMLP29590 882 aa5.95□□□□□ -1.46
SCFD1-214ENST00000554819 CACNB2Q08289 660 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-214ENST00000554819 SQSTM1Q13501 440 aa5.95□□□□□ -1.46
SCFD1-214ENST00000554819 FNDC3BQ53EP0 1204 aaKnown RBP5.95□□□□□ -1.46
SCFD1-214ENST00000554819 CIAPIN1Q6FI81 312 aa5.95□□□□□ -1.46
SCFD1-214ENST00000554819 ETV3LQ6ZN32 361 aa5.95□□□□□ -1.46
SCFD1-214ENST00000554819 OTOP3Q7RTS5 596 aa5.95□□□□□ -1.46
SCFD1-214ENST00000554819 HOMER1Q86YM7 354 aa5.95□□□□□ -1.46
SCFD1-214ENST00000554819 GSTCDQ8NEC7 633 aa5.95□□□□□ -1.46
SCFD1-214ENST00000554819 ZSCAN18Q8TBC5 510 aaPredicted RBP5.95□□□□□ -1.46
SCFD1-214ENST00000554819 PANK1Q8TE04 598 aa5.95□□□□□ -1.46
SCFD1-214ENST00000554819 DDX11Q96FC9 970 aa5.95□□□□□ -1.46
SCFD1-214ENST00000554819 RNPC3Q96LT9 517 aaKnown RBP5.95□□□□□ -1.46
SCFD1-214ENST00000554819 YIPF4Q9BSR8 244 aa5.95□□□□□ -1.46
SCFD1-214ENST00000554819 BCAS3Q9H6U6 928 aa5.95□□□□□ -1.46
SCFD1-214ENST00000554819 IPPKQ9H8X2 491 aa5.95□□□□□ -1.46
SCFD1-214ENST00000554819 SLC52A2Q9HAB3 445 aa5.95□□□□□ -1.46
SCFD1-214ENST00000554819 PCDH18Q9HCL0 1135 aa5.95□□□□□ -1.46
SCFD1-214ENST00000554819 PCDHB4Q9Y5E5 795 aa5.95□□□□□ -1.46
SCFD1-214ENST00000554819 PCDHA9Q9Y5H5 950 aa5.95□□□□□ -1.46
SCFD1-214ENST00000554819 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-214ENST00000554819 ARVCFO00192 962 aa5.94□□□□□ -1.46
SCFD1-214ENST00000554819 WNT9AO14904 365 aa5.94□□□□□ -1.46
SCFD1-214ENST00000554819 CRTAMO95727 393 aa5.94□□□□□ -1.46
SCFD1-214ENST00000554819 ATF2P15336 505 aa5.94□□□□□ -1.46
SCFD1-214ENST00000554819 IGFBP6P24592 240 aaPredicted RBP5.94□□□□□ -1.46
SCFD1-214ENST00000554819 ST5P78524 1137 aa5.94□□□□□ -1.46
SCFD1-214ENST00000554819 FOXO4P98177 505 aa5.94□□□□□ -1.46
SCFD1-214ENST00000554819 FAM47CQ5HY64 1035 aa5.94□□□□□ -1.46
SCFD1-214ENST00000554819 CNKSR3Q6P9H4 555 aa5.94□□□□□ -1.46
SCFD1-214ENST00000554819 B3GNT8Q7Z7M8 397 aa5.94□□□□□ -1.46
SCFD1-214ENST00000554819 ZC3H18Q86VM9 953 aaKnown RBP5.94□□□□□ -1.46
SCFD1-214ENST00000554819 MIB1Q86YT6 1006 aa5.94□□□□□ -1.46
SCFD1-214ENST00000554819 TMEM151BQ8IW70 566 aa5.94□□□□□ -1.46
SCFD1-214ENST00000554819 ZC3H7AQ8IWR0 971 aaKnown RBP5.94□□□□□ -1.46
SCFD1-214ENST00000554819 TMEFF1Q8IYR6 380 aa5.94□□□□□ -1.46
SCFD1-214ENST00000554819 SLC7A14Q8TBB6 771 aa5.94□□□□□ -1.46
SCFD1-214ENST00000554819 PIP4K2CQ8TBX8 421 aa5.94□□□□□ -1.46
SCFD1-214ENST00000554819 APPBP2Q92624 585 aa5.94□□□□□ -1.46
SCFD1-214ENST00000554819 FBXW5Q969U6 566 aa5.94□□□□□ -1.46
SCFD1-214ENST00000554819 MYOTQ9UBF9 498 aa5.94□□□□□ -1.46
SCFD1-214ENST00000554819 TCRBV5S2A0A599 114 aa5.93□□□□□ -1.46
SCFD1-214ENST00000554819 ESYT3A0FGR9 886 aa5.93□□□□□ -1.46
SCFD1-214ENST00000554819 NUAK1O60285 661 aa5.93□□□□□ -1.46
SCFD1-214ENST00000554819 COL6A2P12110 1019 aa5.93□□□□□ -1.46
SCFD1-214ENST00000554819 PI3P19957 117 aa5.93□□□□□ -1.46
SCFD1-214ENST00000554819 SSPNQ14714 243 aa5.93□□□□□ -1.46
SCFD1-214ENST00000554819 TCEA2Q15560 299 aa5.93□□□□□ -1.46
SCFD1-214ENST00000554819 C16orf59Q7L2K0 433 aa5.93□□□□□ -1.46
SCFD1-214ENST00000554819 FAM129CQ86XR2 697 aa5.93□□□□□ -1.46
SCFD1-214ENST00000554819 FAM126BQ8IXS8 530 aa5.93□□□□□ -1.46
SCFD1-214ENST00000554819 PCDH19Q8TAB3 1148 aa5.93□□□□□ -1.46
SCFD1-214ENST00000554819 KANSL2Q9H9L4 492 aa5.93□□□□□ -1.46
SCFD1-214ENST00000554819 CATSPERZQ9NTU4 200 aa5.93□□□□□ -1.46
SCFD1-214ENST00000554819 ASH2LQ9UBL3 628 aa5.93□□□□□ -1.46
SCFD1-214ENST00000554819 DSEQ9UL01 958 aa5.93□□□□□ -1.46
SCFD1-214ENST00000554819 PLA2G2DQ9UNK4 145 aa5.93□□□□□ -1.46
SCFD1-214ENST00000554819 RAPGEF3O95398 923 aa5.92□□□□□ -1.46
SCFD1-214ENST00000554819 ASMTLO95671 621 aa5.92□□□□□ -1.46
SCFD1-214ENST00000554819 SRGAP2CP0DJJ0 459 aa5.92□□□□□ -1.46
SCFD1-214ENST00000554819 CYP2C8P10632 490 aa5.92□□□□□ -1.46
SCFD1-214ENST00000554819 CFPP27918 469 aa5.92□□□□□ -1.46
SCFD1-214ENST00000554819 NKX3-2P78367 333 aa5.92□□□□□ -1.46
SCFD1-214ENST00000554819 CRY1Q16526 586 aa5.92□□□□□ -1.46
SCFD1-214ENST00000554819 HABP4Q5JVS0 413 aaKnown RBP5.92□□□□□ -1.46
SCFD1-214ENST00000554819 CD300LDQ6UXZ3 194 aa5.92□□□□□ -1.46
SCFD1-214ENST00000554819 EP400NLQ6ZTU2 488 aa5.92□□□□□ -1.46
SCFD1-214ENST00000554819 LRRC56Q8IYG6 542 aaPredicted RBP5.92□□□□□ -1.46
SCFD1-214ENST00000554819 NLGN4XQ8N0W4 816 aa5.92□□□□□ -1.46
SCFD1-214ENST00000554819 ARRDC4Q8NCT1 418 aa5.92□□□□□ -1.46
SCFD1-214ENST00000554819 SMARCC2Q8TAQ2 1214 aa5.92□□□□□ -1.46
SCFD1-214ENST00000554819 UHMK1Q8TAS1 419 aaKnown RBP5.92□□□□□ -1.46
SCFD1-214ENST00000554819 TOE1Q96GM8 510 aaKnown RBP5.92□□□□□ -1.46
SCFD1-214ENST00000554819 DTLQ9NZJ0 730 aa5.92□□□□□ -1.46
SCFD1-214ENST00000554819 B4E1Z4 1266 aa5.91□□□□□ -1.46
SCFD1-214ENST00000554819 SLC27A2O14975 620 aa5.91□□□□□ -1.46
SCFD1-214ENST00000554819 NKRFO15226 690 aaKnown RBP eCLIP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms