RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 PPP1R18Q6NYC8 613 aa12.23□□□□□ -0.45
SHMT2-213ENST00000554600 ZNF713Q8N859 430 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-213ENST00000554600 SLC43A3Q8NBI5 491 aa12.23□□□□□ -0.45
SHMT2-213ENST00000554600 PHKBQ93100 1093 aa12.23□□□□□ -0.45
SHMT2-213ENST00000554600 ALG1Q9BT22 464 aa12.23□□□□□ -0.45
SHMT2-213ENST00000554600 TM6SF1Q9BZW5 370 aa12.23□□□□□ -0.45
SHMT2-213ENST00000554600 ALDH8A1Q9H2A2 487 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-213ENST00000554600 NCOA5Q9HCD5 579 aaKnown RBP12.23□□□□□ -0.45
SHMT2-213ENST00000554600 TBX21Q9UL17 535 aa12.23□□□□□ -0.45
SHMT2-213ENST00000554600 PCDHA6Q9UN73 950 aa12.23□□□□□ -0.45
SHMT2-213ENST00000554600 NOD1Q9Y239 953 aa12.23□□□□□ -0.45
SHMT2-213ENST00000554600 PCDHA8Q9Y5H6 950 aa12.23□□□□□ -0.45
SHMT2-213ENST00000554600 TET1Q8NFU7 2136 aa12.23□□□□□ -0.45
SHMT2-213ENST00000554600 SMCO2A6NFE2 343 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 STXBP3O00186 592 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 NOP56O00567 594 aaKnown RBP12.22□□□□□ -0.45
SHMT2-213ENST00000554600 SOX1O00570 391 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-213ENST00000554600 CPLX1O14810 134 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 FIBPO43427 364 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 B4GALT4O60513 344 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 ZNF286BP0CG31 522 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 TGFB3P10600 412 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 SCG2P13521 617 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 PDIA3P30101 505 aaKnown RBP12.22□□□□□ -0.45
SHMT2-213ENST00000554600 CYP2C18P33260 490 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 SP2Q02086 613 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 SP4Q02446 784 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 TOB2Q14106 344 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-213ENST00000554600 CELF3Q5SZQ8 465 aaKnown RBP12.22□□□□□ -0.45
SHMT2-213ENST00000554600 MYSM1Q5VVJ2 828 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 TYW1BQ6NUM6 668 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 XRRA1Q6P2D8 792 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 NLRX1Q86UT6 975 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 FBXL16Q8N461 479 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 PPTC7Q8NI37 304 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 LRCH3Q96II8 777 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 PGBD1Q96JS3 809 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 SLC26A6Q9BXS9 759 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 AGXT2Q9BYV1 514 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 HIPK3Q9H422 1215 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 RIC8AQ9NPQ8 531 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 TRMT13Q9NUP7 481 aaKnown RBP12.22□□□□□ -0.45
SHMT2-213ENST00000554600 BARHL2Q9NY43 387 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 PKD2L1Q9P0L9 805 aa12.22□□□□□ -0.45
SHMT2-213ENST00000554600 LOXHD1Q8IVV2 1947 aa12.21□□□□□ -0.45
SHMT2-213ENST00000554600 PRPF3O43395 683 aaKnown RBP12.21□□□□□ -0.45
SHMT2-213ENST00000554600 CD4P01730 458 aa12.21□□□□□ -0.45
SHMT2-213ENST00000554600 SUPT20HL2P0C7V6 817 aa12.21□□□□□ -0.45
SHMT2-213ENST00000554600 CYP2C9P11712 490 aa12.21□□□□□ -0.45
SHMT2-213ENST00000554600 PSEN2P49810 448 aa12.21□□□□□ -0.45
SHMT2-213ENST00000554600 PPIGQ13427 754 aaKnown RBP eCLIP12.21□□□□□ -0.453e-10■□□□□ 10.6
SHMT2-213ENST00000554600 NEDD9Q14511 834 aa12.21□□□□□ -0.45
SHMT2-213ENST00000554600 SHHQ15465 462 aa12.21□□□□□ -0.45
SHMT2-213ENST00000554600 PFKFB3Q16875 520 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-213ENST00000554600 C9orf50Q5SZB4 431 aa12.21□□□□□ -0.45
SHMT2-213ENST00000554600 MFSD5Q6N075 450 aa12.21□□□□□ -0.45
SHMT2-213ENST00000554600 CYFIP1Q7L576 1253 aa12.21□□□□□ -0.45
SHMT2-213ENST00000554600 TRIM22Q8IYM9 498 aa12.21□□□□□ -0.45
SHMT2-213ENST00000554600 TMEM199Q8N511 208 aa12.21□□□□□ -0.45
SHMT2-213ENST00000554600 CCDC12Q8WUD4 166 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-213ENST00000554600 EMID1Q96A84 441 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-213ENST00000554600 INPP4AQ96PE3 977 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-213ENST00000554600 ANO3Q9BYT9 981 aa12.21□□□□□ -0.45
SHMT2-213ENST00000554600 GLT8D2Q9H1C3 349 aa12.21□□□□□ -0.45
SHMT2-213ENST00000554600 EVPLQ92817 2033 aa12.21□□□□□ -0.46
SHMT2-213ENST00000554600 NID2Q14112 1375 aa12.2□□□□□ -0.46
SHMT2-213ENST00000554600 SPATA31C2B4DYI2 1134 aa12.2□□□□□ -0.46
SHMT2-213ENST00000554600 FOSP01100 380 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-213ENST00000554600 CSF2RAP15509 400 aa12.2□□□□□ -0.46
SHMT2-213ENST00000554600 ICAM3P32942 547 aa12.2□□□□□ -0.46
SHMT2-213ENST00000554600 ZNF76P36508 570 aa12.2□□□□□ -0.46
SHMT2-213ENST00000554600 CCL23P55773 120 aa12.2□□□□□ -0.46
SHMT2-213ENST00000554600 ANAPC15P60006 121 aa12.2□□□□□ -0.46
SHMT2-213ENST00000554600 SSRP1Q08945 709 aaKnown RBP12.2□□□□□ -0.46
SHMT2-213ENST00000554600 HSDL1Q3SXM5 330 aa12.2□□□□□ -0.46
SHMT2-213ENST00000554600 JAKMIP3Q5VZ66 844 aa12.2□□□□□ -0.46
SHMT2-213ENST00000554600 NFRKBQ6P4R8 1299 aa12.2□□□□□ -0.46
SHMT2-213ENST00000554600 CPLX2Q6PUV4 134 aaKnown RBP12.2□□□□□ -0.46
SHMT2-213ENST00000554600 C7orf31Q8N865 590 aa12.2□□□□□ -0.46
SHMT2-213ENST00000554600 GPRASP2Q96D09 838 aa12.2□□□□□ -0.46
SHMT2-213ENST00000554600 RNPC3Q96LT9 517 aaKnown RBP12.2□□□□□ -0.46
SHMT2-213ENST00000554600 NOC4LQ9BVI4 516 aaKnown RBP12.2□□□□□ -0.46
SHMT2-213ENST00000554600 KATNAL1Q9BW62 490 aa12.2□□□□□ -0.46
SHMT2-213ENST00000554600 C6orf50Q9HD87 102 aa12.2□□□□□ -0.46
SHMT2-213ENST00000554600 TMEM260Q9NX78 707 aa12.2□□□□□ -0.46
SHMT2-213ENST00000554600 UMODL1Q5DID0 1318 aa12.19□□□□□ -0.46
SHMT2-213ENST00000554600 PPFIA4O75335 1185 aa12.19□□□□□ -0.46
SHMT2-213ENST00000554600 ACRP10323 421 aa12.19□□□□□ -0.46
SHMT2-213ENST00000554600 IFNAR1P17181 557 aa12.19□□□□□ -0.46
SHMT2-213ENST00000554600 EPHB4P54760 987 aa12.19□□□□□ -0.46
SHMT2-213ENST00000554600 EVCP57679 992 aa12.19□□□□□ -0.46
SHMT2-213ENST00000554600 PTPN11Q06124 597 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-213ENST00000554600 SEMA3FQ13275 785 aa12.19□□□□□ -0.46
SHMT2-213ENST00000554600 AP3B2Q13367 1082 aa12.19□□□□□ -0.46
SHMT2-213ENST00000554600 MTMR1Q13613 665 aa12.19□□□□□ -0.46
SHMT2-213ENST00000554600 MFSD10Q14728 455 aa12.19□□□□□ -0.46
SHMT2-213ENST00000554600 NTRK3Q16288 839 aa12.19□□□□□ -0.46
SHMT2-213ENST00000554600 PTGISQ16647 500 aa12.19□□□□□ -0.46
SHMT2-213ENST00000554600 KIAA0753Q2KHM9 967 aa12.19□□□□□ -0.46
SHMT2-213ENST00000554600 LRIT3Q3SXY7 679 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms