RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 TRIM39Q9HCM9 518 aa7.4□□□□□ -1.22
SCFD1-211ENST00000554437 KRIT1O00522 736 aa7.39□□□□□ -1.23
SCFD1-211ENST00000554437 HGSO14964 777 aaPredicted RBP7.39□□□□□ -1.23
SCFD1-211ENST00000554437 SEMA7AO75326 666 aa7.39□□□□□ -1.23
SCFD1-211ENST00000554437 COL6A2P12110 1019 aa7.39□□□□□ -1.23
SCFD1-211ENST00000554437 PABPC4Q13310 644 aaKnown RBP eCLIP7.39□□□□□ -1.233e-10■■■□□ 16.3
SCFD1-211ENST00000554437 MILR1Q7Z6M3 343 aa7.39□□□□□ -1.23
SCFD1-211ENST00000554437 PIP4K2CQ8TBX8 421 aa7.39□□□□□ -1.23
SCFD1-211ENST00000554437 ALG3Q92685 438 aa7.39□□□□□ -1.23
SCFD1-211ENST00000554437 FBXW5Q969U6 566 aa7.39□□□□□ -1.23
SCFD1-211ENST00000554437 TSPAN17Q96FV3 270 aa7.39□□□□□ -1.23
SCFD1-211ENST00000554437 CNTD2Q9H8S5 307 aa7.39□□□□□ -1.23
SCFD1-211ENST00000554437 MBD1Q9UIS9 605 aaPredicted RBP7.39□□□□□ -1.23
SCFD1-211ENST00000554437 PALD1Q9ULE6 856 aa7.39□□□□□ -1.23
SCFD1-211ENST00000554437 MAFKO60675 156 aa7.38□□□□□ -1.23
SCFD1-211ENST00000554437 RFPL3O75679 317 aa7.38□□□□□ -1.23
SCFD1-211ENST00000554437 TMEM253P0C7T8 217 aa7.38□□□□□ -1.23
SCFD1-211ENST00000554437 ST5P78524 1137 aa7.38□□□□□ -1.23
SCFD1-211ENST00000554437 FAM47CQ5HY64 1035 aa7.38□□□□□ -1.23
SCFD1-211ENST00000554437 OTOP3Q7RTS5 596 aa7.38□□□□□ -1.23
SCFD1-211ENST00000554437 LDHDQ86WU2 507 aa7.38□□□□□ -1.23
SCFD1-211ENST00000554437 POU5F2Q8N7G0 328 aa7.38□□□□□ -1.23
SCFD1-211ENST00000554437 FEZ1Q99689 392 aa7.38□□□□□ -1.23
SCFD1-211ENST00000554437 SLC6A20Q9NP91 592 aa7.38□□□□□ -1.23
SCFD1-211ENST00000554437 CATSPERZQ9NTU4 200 aa7.38□□□□□ -1.23
SCFD1-211ENST00000554437 PCDHB4Q9Y5E5 795 aa7.38□□□□□ -1.23
SCFD1-211ENST00000554437 TCRBV16S1A1N1A0A5B0 115 aa7.37□□□□□ -1.23
SCFD1-211ENST00000554437 ETV2O00321 342 aaPredicted RBP7.37□□□□□ -1.23
SCFD1-211ENST00000554437 GSTA4O15217 222 aa7.37□□□□□ -1.23
SCFD1-211ENST00000554437 PYGMP11217 842 aa7.37□□□□□ -1.23
SCFD1-211ENST00000554437 DNM2P50570 870 aa7.37□□□□□ -1.23
SCFD1-211ENST00000554437 NCKAP1LP55160 1127 aa7.37□□□□□ -1.23
SCFD1-211ENST00000554437 DLG4P78352 724 aa7.37□□□□□ -1.23
SCFD1-211ENST00000554437 EMC4Q5J8M3 183 aa7.37□□□□□ -1.23
SCFD1-211ENST00000554437 LCE4AQ5TA78 99 aa7.37□□□□□ -1.23
SCFD1-211ENST00000554437 PLA2G2DQ9UNK4 145 aa7.37□□□□□ -1.23
SCFD1-211ENST00000554437 ZNF652Q9Y2D9 606 aa7.37□□□□□ -1.23
SCFD1-211ENST00000554437 WNT9AO14904 365 aa7.36□□□□□ -1.23
SCFD1-211ENST00000554437 NKRFO15226 690 aaKnown RBP eCLIP7.36□□□□□ -1.23
SCFD1-211ENST00000554437 SMARCA5O60264 1052 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-211ENST00000554437 OPA1O60313 960 aa7.36□□□□□ -1.23
SCFD1-211ENST00000554437 TADA3O75528 432 aa7.36□□□□□ -1.23
SCFD1-211ENST00000554437 HSD3B2P26439 372 aa7.36□□□□□ -1.23
SCFD1-211ENST00000554437 CDR1P51861 262 aa7.36□□□□□ -1.23
SCFD1-211ENST00000554437 PLEKHG4Q58EX7 1191 aa7.36□□□□□ -1.23
SCFD1-211ENST00000554437 C16orf59Q7L2K0 433 aa7.36□□□□□ -1.23
SCFD1-211ENST00000554437 KIAA0907Q7Z7F0 614 aaPredicted RBP7.36□□□□□ -1.23
SCFD1-211ENST00000554437 PPP1R16BQ96T49 567 aa7.36□□□□□ -1.23
SCFD1-211ENST00000554437 SMOC1Q9H4F8 434 aa7.36□□□□□ -1.23
SCFD1-211ENST00000554437 GCM1Q9NP62 436 aa7.36□□□□□ -1.23
SCFD1-211ENST00000554437 MYOTQ9UBF9 498 aa7.36□□□□□ -1.23
SCFD1-211ENST00000554437 COQ6Q9Y2Z9 468 aa7.36□□□□□ -1.23
SCFD1-211ENST00000554437 CCDC66A2RUB6 948 aa7.35□□□□□ -1.23
SCFD1-211ENST00000554437 NFIBO00712 420 aa7.35□□□□□ -1.23
SCFD1-211ENST00000554437 SLC27A2O14975 620 aa7.35□□□□□ -1.23
SCFD1-211ENST00000554437 N4BP3O15049 544 aa7.35□□□□□ -1.23
SCFD1-211ENST00000554437 DNAJC8O75937 253 aaPredicted RBP7.35□□□□□ -1.23
SCFD1-211ENST00000554437 ASLP04424 464 aa7.35□□□□□ -1.23
SCFD1-211ENST00000554437 PFKLP17858 780 aa7.35□□□□□ -1.23
SCFD1-211ENST00000554437 SDSP20132 328 aa7.35□□□□□ -1.23
SCFD1-211ENST00000554437 GLDCP23378 1020 aa7.35□□□□□ -1.23
SCFD1-211ENST00000554437 PMLP29590 882 aa7.35□□□□□ -1.23
SCFD1-211ENST00000554437 IGFALSP35858 605 aa7.35□□□□□ -1.23
SCFD1-211ENST00000554437 EPHB3P54753 998 aa7.35□□□□□ -1.23
SCFD1-211ENST00000554437 TARBP2Q15633 366 aaKnown RBP7.35□□□□□ -1.23
SCFD1-211ENST00000554437 CRY1Q16526 586 aa7.35□□□□□ -1.23
SCFD1-211ENST00000554437 PHOSPHO1Q8TCT1 267 aa7.35□□□□□ -1.23
SCFD1-211ENST00000554437 MZB1Q8WU39 189 aa7.35□□□□□ -1.23
SCFD1-211ENST00000554437 NINJ1Q92982 152 aa7.35□□□□□ -1.23
SCFD1-211ENST00000554437 DSEQ9UL01 958 aa7.35□□□□□ -1.23
SCFD1-211ENST00000554437 NUB1Q9Y5A7 615 aa7.35□□□□□ -1.23
SCFD1-211ENST00000554437 PCDHA5Q9Y5H7 936 aa7.35□□□□□ -1.23
SCFD1-211ENST00000554437 TNPO3Q9Y5L0 923 aaKnown RBP7.35□□□□□ -1.23
SCFD1-211ENST00000554437 IRS2Q9Y4H2 1338 aa7.34□□□□□ -1.23
SCFD1-211ENST00000554437 CLSTN1O94985 981 aa7.34□□□□□ -1.23
SCFD1-211ENST00000554437 CKMP06732 381 aa7.34□□□□□ -1.23
SCFD1-211ENST00000554437 ASGR2P07307 311 aa7.34□□□□□ -1.23
SCFD1-211ENST00000554437 NCAM1P13591 858 aa7.34□□□□□ -1.23
SCFD1-211ENST00000554437 PDE6AP16499 860 aa7.34□□□□□ -1.23
SCFD1-211ENST00000554437 PKN1Q16512 942 aa7.34□□□□□ -1.23
SCFD1-211ENST00000554437 HABP4Q5JVS0 413 aaKnown RBP7.34□□□□□ -1.23
SCFD1-211ENST00000554437 CYP4F22Q6NT55 531 aa7.34□□□□□ -1.23
SCFD1-211ENST00000554437 ATG14Q6ZNE5 492 aa7.34□□□□□ -1.23
SCFD1-211ENST00000554437 OSTM1Q86WC4 334 aa7.34□□□□□ -1.23
SCFD1-211ENST00000554437 AMIGO3Q86WK7 504 aa7.34□□□□□ -1.23
SCFD1-211ENST00000554437 RBM12BQ8IXT5 1001 aaKnown RBP7.34□□□□□ -1.23
SCFD1-211ENST00000554437 DHX37Q8IY37 1157 aaKnown RBP7.34□□□□□ -1.23
SCFD1-211ENST00000554437 NIM1KQ8IY84 436 aa7.34□□□□□ -1.23
SCFD1-211ENST00000554437 UHMK1Q8TAS1 419 aaKnown RBP7.34□□□□□ -1.23
SCFD1-211ENST00000554437 PANK1Q8TE04 598 aa7.34□□□□□ -1.23
SCFD1-211ENST00000554437 YIPF4Q9BSR8 244 aa7.34□□□□□ -1.23
SCFD1-211ENST00000554437 KRTAP4-5Q9BYR2 181 aa7.34□□□□□ -1.23
SCFD1-211ENST00000554437 MAGEC2Q9UBF1 373 aaPredicted RBP7.34□□□□□ -1.23
SCFD1-211ENST00000554437 CBLCQ9ULV8 474 aa7.34□□□□□ -1.23
SCFD1-211ENST00000554437 PLAAQ9Y263 795 aa7.34□□□□□ -1.23
SCFD1-211ENST00000554437 TCRBV5S2A0A599 114 aa7.33□□□□□ -1.24
SCFD1-211ENST00000554437 TCAF2A6NFQ2 919 aa7.33□□□□□ -1.24
SCFD1-211ENST00000554437 B4E1Z4 1266 aa7.33□□□□□ -1.24
SCFD1-211ENST00000554437 IRS4O14654 1257 aaPredicted RBP7.33□□□□□ -1.24
SCFD1-211ENST00000554437 BUB1BO60566 1050 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms