RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 IQCA1Q86XH1 822 aa16.21■□□□□ 0.19
SPTLC2-202ENST00000554365 DGKHQ86XP1 1220 aa16.21■□□□□ 0.19
SPTLC2-202ENST00000554365 ADGRF4Q8IZF3 695 aa16.21■□□□□ 0.19
SPTLC2-202ENST00000554365 FBXL16Q8N461 479 aa16.21■□□□□ 0.19
SPTLC2-202ENST00000554365 IGDCC4Q8TDY8 1250 aa16.21■□□□□ 0.19
SPTLC2-202ENST00000554365 NSUN6Q8TEA1 469 aaKnown RBP16.21■□□□□ 0.19
SPTLC2-202ENST00000554365 ZBED2Q9BTP6 218 aa16.21■□□□□ 0.19
SPTLC2-202ENST00000554365 PDRG1Q9NUG6 133 aa16.21■□□□□ 0.19
SPTLC2-202ENST00000554365 COL20A1Q9P218 1284 aa16.21■□□□□ 0.19
SPTLC2-202ENST00000554365 TCF20Q9UGU0 1960 aaKnown RBP16.2■□□□□ 0.18
SPTLC2-202ENST00000554365 SH2B2O14492 632 aaPredicted RBP16.2■□□□□ 0.18
SPTLC2-202ENST00000554365 SELPP16109 830 aa16.2■□□□□ 0.18
SPTLC2-202ENST00000554365 AK2P54819 239 aa16.2■□□□□ 0.18
SPTLC2-202ENST00000554365 GRB10Q13322 594 aa16.2■□□□□ 0.18
SPTLC2-202ENST00000554365 SEC23AQ15436 765 aa16.2■□□□□ 0.18
SPTLC2-202ENST00000554365 ARHGEF16Q5VV41 709 aa16.2■□□□□ 0.18
SPTLC2-202ENST00000554365 LRRC8DQ7L1W4 858 aa16.2■□□□□ 0.18
SPTLC2-202ENST00000554365 SPRED2Q7Z698 418 aa16.2■□□□□ 0.18
SPTLC2-202ENST00000554365 MCF2L2Q86YR7 1114 aa16.2■□□□□ 0.18
SPTLC2-202ENST00000554365 C7orf31Q8N865 590 aa16.2■□□□□ 0.18
SPTLC2-202ENST00000554365 KAT2BQ92831 832 aa16.2■□□□□ 0.18
SPTLC2-202ENST00000554365 CTAGE1Q96RT6 745 aa16.2■□□□□ 0.18
SPTLC2-202ENST00000554365 RMDN3Q96TC7 470 aa16.2■□□□□ 0.18
SPTLC2-202ENST00000554365 SENP2Q9HC62 589 aa16.2■□□□□ 0.18
SPTLC2-202ENST00000554365 VAT1LQ9HCJ6 419 aa16.2■□□□□ 0.18
SPTLC2-202ENST00000554365 COG5Q9UP83 839 aa16.2■□□□□ 0.18
SPTLC2-202ENST00000554365 REV3LO60673 3130 aa16.19■□□□□ 0.18
SPTLC2-202ENST00000554365 EIF2AK2P19525 551 aaKnown RBP16.19■□□□□ 0.18
SPTLC2-202ENST00000554365 WDR5P61964 334 aaKnown RBP16.19■□□□□ 0.18
SPTLC2-202ENST00000554365 DGKDQ16760 1214 aa16.19■□□□□ 0.18
SPTLC2-202ENST00000554365 QRICH1Q2TAL8 776 aa16.19■□□□□ 0.18
SPTLC2-202ENST00000554365 ASPRV1Q53RT3 343 aa16.19■□□□□ 0.18
SPTLC2-202ENST00000554365 CCDC178Q5BJE1 867 aa16.19■□□□□ 0.18
SPTLC2-202ENST00000554365 Q6ZUG5 572 aa16.19■□□□□ 0.18
SPTLC2-202ENST00000554365 SESTD1Q86VW0 696 aa16.19■□□□□ 0.18
SPTLC2-202ENST00000554365 FBXO11Q86XK2 927 aa16.19■□□□□ 0.18
SPTLC2-202ENST00000554365 DHX38Q92620 1227 aaKnown RBP16.19■□□□□ 0.18
SPTLC2-202ENST00000554365 SNX21Q969T3 373 aa16.19■□□□□ 0.18
SPTLC2-202ENST00000554365 IWS1Q96ST2 819 aa16.19■□□□□ 0.18
SPTLC2-202ENST00000554365 ALG1Q9BT22 464 aa16.19■□□□□ 0.18
SPTLC2-202ENST00000554365 MTA3Q9BTC8 594 aa16.19■□□□□ 0.18
SPTLC2-202ENST00000554365 MAF1Q9H063 256 aa16.19■□□□□ 0.18
SPTLC2-202ENST00000554365 HDAC6Q9UBN7 1215 aa16.19■□□□□ 0.18
SPTLC2-202ENST00000554365 MRPL11Q9Y3B7 192 aaKnown RBP16.19■□□□□ 0.18
SPTLC2-202ENST00000554365 LCHNA4D1U4 455 aa16.18■□□□□ 0.18
SPTLC2-202ENST00000554365 CFBP00751 764 aa16.18■□□□□ 0.18
SPTLC2-202ENST00000554365 PSEN2P49810 448 aa16.18■□□□□ 0.18
SPTLC2-202ENST00000554365 DEFB103AP81534 67 aa16.18■□□□□ 0.18
SPTLC2-202ENST00000554365 GPNMBQ14956 572 aa16.18■□□□□ 0.18
SPTLC2-202ENST00000554365 CNKSR3Q6P9H4 555 aa16.18■□□□□ 0.18
SPTLC2-202ENST00000554365 HLA-CQ95604 372 aa16.18■□□□□ 0.18
SPTLC2-202ENST00000554365 TMEM87BQ96K49 555 aa16.18■□□□□ 0.18
SPTLC2-202ENST00000554365 ZSCAN10Q96SZ4 725 aaPredicted RBP16.18■□□□□ 0.18
SPTLC2-202ENST00000554365 C1QTNF1Q9BXJ1 281 aa16.18■□□□□ 0.18
SPTLC2-202ENST00000554365 LY9Q9HBG7 655 aa16.18■□□□□ 0.18
SPTLC2-202ENST00000554365 GTF2IRD1Q9UHL9 959 aa16.18■□□□□ 0.18
SPTLC2-202ENST00000554365 MRVI1Q9Y6F6 885 aa16.18■□□□□ 0.18
SPTLC2-202ENST00000554365 PRRC2BQ5JSZ5 2229 aaKnown RBP16.18■□□□□ 0.18
SPTLC2-202ENST00000554365 ST18O60284 1047 aa16.17■□□□□ 0.18
SPTLC2-202ENST00000554365 PARP1P09874 1014 aaKnown RBP16.17■□□□□ 0.18
SPTLC2-202ENST00000554365 ZNF286BP0CG31 522 aa16.17■□□□□ 0.18
SPTLC2-202ENST00000554365 CKBP12277 381 aa16.17■□□□□ 0.18
SPTLC2-202ENST00000554365 DHX37Q8IY37 1157 aaKnown RBP16.17■□□□□ 0.18
SPTLC2-202ENST00000554365 ENAHQ8N8S7 591 aaPredicted RBP16.17■□□□□ 0.18
SPTLC2-202ENST00000554365 GDPD5Q8WTR4 605 aa16.17■□□□□ 0.18
SPTLC2-202ENST00000554365 ANKS1AQ92625 1134 aa16.17■□□□□ 0.18
SPTLC2-202ENST00000554365 LARP6Q9BRS8 491 aaKnown RBP16.17■□□□□ 0.18
SPTLC2-202ENST00000554365 KATNAL1Q9BW62 490 aa16.17■□□□□ 0.18
SPTLC2-202ENST00000554365 JMJD4Q9H9V9 463 aa16.17■□□□□ 0.18
SPTLC2-202ENST00000554365 PXMP2Q9NR77 195 aa16.17■□□□□ 0.18
SPTLC2-202ENST00000554365 DDX41Q9UJV9 622 aaKnown RBP16.17■□□□□ 0.18
SPTLC2-202ENST00000554365 MTUS1Q9ULD2 1270 aa16.17■□□□□ 0.18
SPTLC2-202ENST00000554365 TET1Q8NFU7 2136 aa16.16■□□□□ 0.18
SPTLC2-202ENST00000554365 TRANK1O15050 2925 aa16.16■□□□□ 0.18
SPTLC2-202ENST00000554365 COL4A4P53420 1690 aaPredicted RBP16.16■□□□□ 0.18
SPTLC2-202ENST00000554365 RBAK-RBAKDNI3L0D1 243 aa16.16■□□□□ 0.18
SPTLC2-202ENST00000554365 IFIT3O14879 490 aaKnown RBP16.16■□□□□ 0.18
SPTLC2-202ENST00000554365 SORBS3O60504 671 aa16.16■□□□□ 0.18
SPTLC2-202ENST00000554365 LPXNO60711 386 aa16.16■□□□□ 0.18
SPTLC2-202ENST00000554365 NBNO60934 754 aa16.16■□□□□ 0.18
SPTLC2-202ENST00000554365 EIF3JO75822 258 aaKnown RBP16.16■□□□□ 0.18
SPTLC2-202ENST00000554365 PARNO95453 639 aaKnown RBP16.16■□□□□ 0.18
SPTLC2-202ENST00000554365 NR3C2P08235 984 aa16.16■□□□□ 0.18
SPTLC2-202ENST00000554365 EVCP57679 992 aa16.16■□□□□ 0.18
SPTLC2-202ENST00000554365 RBL2Q08999 1139 aa16.16■□□□□ 0.18
SPTLC2-202ENST00000554365 LAMC2Q13753 1193 aa16.16■□□□□ 0.18
SPTLC2-202ENST00000554365 MFSD10Q14728 455 aa16.16■□□□□ 0.18
SPTLC2-202ENST00000554365 KIAA0753Q2KHM9 967 aa16.16■□□□□ 0.18
SPTLC2-202ENST00000554365 TCTN1Q2MV58 587 aa16.16■□□□□ 0.18
SPTLC2-202ENST00000554365 FAM117BQ6P1L5 589 aa16.16■□□□□ 0.18
SPTLC2-202ENST00000554365 BRF1Q92994 677 aa16.16■□□□□ 0.18
SPTLC2-202ENST00000554365 BRPF3Q9ULD4 1205 aa16.16■□□□□ 0.18
SPTLC2-202ENST00000554365 BDP1A6H8Y1 2624 aa16.15■□□□□ 0.18
SPTLC2-202ENST00000554365 PTPRSQ13332 1948 aa16.15■□□□□ 0.18
SPTLC2-202ENST00000554365 TRIP12Q14669 1992 aaPredicted RBP16.15■□□□□ 0.18
SPTLC2-202ENST00000554365 ABHD14A-ACY1A0A1B0GW23 586 aa16.15■□□□□ 0.18
SPTLC2-202ENST00000554365 LARGE1O95461 756 aa16.15■□□□□ 0.18
SPTLC2-202ENST00000554365 CXCL10P02778 98 aa16.15■□□□□ 0.18
SPTLC2-202ENST00000554365 MYCLP12524 364 aaPredicted RBP16.15■□□□□ 0.18
SPTLC2-202ENST00000554365 LIFRP42702 1097 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms