RNA–Protein interactions for RNA: ENST00000554131.5

PSEN1-210, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-210ENST00000554131 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.96■□□□□ 0.951e-9■■■■■ 54.1
PSEN1-210ENST00000554131 HMX1Q9NP08 348 aaPredicted RBP20.96■□□□□ 0.95
PSEN1-210ENST00000554131 GNEQ9Y223 722 aaKnown RBP20.96■□□□□ 0.95
PSEN1-210ENST00000554131 FIBPO43427 364 aa20.95■□□□□ 0.94
PSEN1-210ENST00000554131 ATP9AO75110 1047 aa20.95■□□□□ 0.94
PSEN1-210ENST00000554131 BRD1O95696 1058 aa20.95■□□□□ 0.94
PSEN1-210ENST00000554131 ZSCAN22P10073 491 aaPredicted RBP20.95■□□□□ 0.94
PSEN1-210ENST00000554131 AKR1A1P14550 325 aa20.95■□□□□ 0.94
PSEN1-210ENST00000554131 GNL2Q13823 731 aaKnown RBP20.95■□□□□ 0.94
PSEN1-210ENST00000554131 GNPTABQ3T906 1256 aa20.95■□□□□ 0.94
PSEN1-210ENST00000554131 DUSP28Q4G0W2 176 aa20.95■□□□□ 0.94
PSEN1-210ENST00000554131 GJC2Q5T442 439 aaPredicted RBP20.95■□□□□ 0.94
PSEN1-210ENST00000554131 BRAPQ7Z569 592 aa20.95■□□□□ 0.94
PSEN1-210ENST00000554131 BCAS3Q9H6U6 928 aa20.95■□□□□ 0.94
PSEN1-210ENST00000554131 KCNH7Q9NS40 1196 aa20.95■□□□□ 0.94
PSEN1-210ENST00000554131 FAM184BQ9ULE4 1060 aa20.95■□□□□ 0.94
PSEN1-210ENST00000554131 TGFB3P10600 412 aa20.94■□□□□ 0.94
PSEN1-210ENST00000554131 KCNA2P16389 499 aa20.94■□□□□ 0.94
PSEN1-210ENST00000554131 TRAPPC10P48553 1259 aa20.94■□□□□ 0.94
PSEN1-210ENST00000554131 MTMR1Q13613 665 aa20.94■□□□□ 0.94
PSEN1-210ENST00000554131 NBR1Q14596 966 aa20.94■□□□□ 0.94
PSEN1-210ENST00000554131 TTLL4Q14679 1199 aa20.94■□□□□ 0.94
PSEN1-210ENST00000554131 LY6KQ17RY6 165 aa20.94■□□□□ 0.94
PSEN1-210ENST00000554131 PRR16Q569H4 304 aa20.94■□□□□ 0.94
PSEN1-210ENST00000554131 NLRX1Q86UT6 975 aa20.94■□□□□ 0.94
PSEN1-210ENST00000554131 PLA2G4DQ86XP0 818 aa20.94■□□□□ 0.94
PSEN1-210ENST00000554131 COPS5Q92905 334 aa20.94■□□□□ 0.94
PSEN1-210ENST00000554131 AGO4Q9HCK5 861 aaKnown RBP20.94■□□□□ 0.94
PSEN1-210ENST00000554131 DDX20Q9UHI6 824 aaKnown RBP20.94■□□□□ 0.94
PSEN1-210ENST00000554131 MRVI1Q9Y6F6 885 aa20.94■□□□□ 0.94
PSEN1-210ENST00000554131 MAFGO15525 162 aa20.93■□□□□ 0.94
PSEN1-210ENST00000554131 CCNT1O60563 726 aaKnown RBP20.93■□□□□ 0.94
PSEN1-210ENST00000554131 TXNP10599 105 aaKnown RBP20.93■□□□□ 0.94
PSEN1-210ENST00000554131 GCFC2P16383 781 aaKnown RBP20.93■□□□□ 0.94
PSEN1-210ENST00000554131 UBA1P22314 1058 aaKnown RBP20.93■□□□□ 0.94
PSEN1-210ENST00000554131 CNGA1P29973 690 aa20.93■□□□□ 0.94
PSEN1-210ENST00000554131 ZNF76P36508 570 aa20.93■□□□□ 0.94
PSEN1-210ENST00000554131 SETQ01105 290 aaPredicted RBP20.93■□□□□ 0.94
PSEN1-210ENST00000554131 TNFAIP2Q03169 654 aa20.93■□□□□ 0.94
PSEN1-210ENST00000554131 ITGB3BPQ13352 177 aaPredicted RBP20.93■□□□□ 0.94
PSEN1-210ENST00000554131 MYSM1Q5VVJ2 828 aa20.93■□□□□ 0.94
PSEN1-210ENST00000554131 ANO1Q5XXA6 986 aa20.93■□□□□ 0.94
PSEN1-210ENST00000554131 KCNV1Q6PIU1 500 aa20.93■□□□□ 0.94
PSEN1-210ENST00000554131 ETNPPLQ8TBG4 499 aa20.93■□□□□ 0.94
PSEN1-210ENST00000554131 SENP7Q9BQF6 1050 aa20.93■□□□□ 0.94
PSEN1-210ENST00000554131 KCNMB3Q9NPA1 279 aa20.93■□□□□ 0.94
PSEN1-210ENST00000554131 DDX25Q9UHL0 483 aaKnown RBP20.93■□□□□ 0.94
PSEN1-210ENST00000554131 CTAGE5O15320 804 aa20.92■□□□□ 0.94
PSEN1-210ENST00000554131 MSH4O15457 936 aa20.92■□□□□ 0.94
PSEN1-210ENST00000554131 DUSP11O75319 330 aaKnown RBP20.92■□□□□ 0.94
PSEN1-210ENST00000554131 F13A1P00488 732 aa20.92■□□□□ 0.94
PSEN1-210ENST00000554131 MYCP01106 439 aaPredicted RBP20.92■□□□□ 0.94
PSEN1-210ENST00000554131 NKX3-2P78367 333 aa20.92■□□□□ 0.94
PSEN1-210ENST00000554131 ARHGAP1Q07960 439 aa20.92■□□□□ 0.94
PSEN1-210ENST00000554131 TTC38Q5R3I4 469 aa20.92■□□□□ 0.94
PSEN1-210ENST00000554131 FAM173BQ6P4H8 233 aa20.92■□□□□ 0.94
PSEN1-210ENST00000554131 CDHR1Q96JP9 859 aa20.92■□□□□ 0.94
PSEN1-210ENST00000554131 IPO9Q96P70 1041 aaKnown RBP20.92■□□□□ 0.94
PSEN1-210ENST00000554131 ZSCAN16Q9H4T2 348 aaPredicted RBP20.92■□□□□ 0.94
PSEN1-210ENST00000554131 PCDHB6Q9Y5E3 794 aa20.92■□□□□ 0.94
PSEN1-210ENST00000554131 DHX15O43143 795 aaKnown RBP20.91■□□□□ 0.94
PSEN1-210ENST00000554131 IRX5P78411 483 aaPredicted RBP20.91■□□□□ 0.94
PSEN1-210ENST00000554131 RILPL1Q5EBL4 403 aa20.91■□□□□ 0.94
PSEN1-210ENST00000554131 POTEDQ86YR6 584 aa20.91■□□□□ 0.94
PSEN1-210ENST00000554131 C4orf32Q8N8J7 132 aa20.91■□□□□ 0.94
PSEN1-210ENST00000554131 HAS1Q92839 578 aa20.91■□□□□ 0.94
PSEN1-210ENST00000554131 EMID1Q96A84 441 aaPredicted RBP20.91■□□□□ 0.94
PSEN1-210ENST00000554131 NAP1L4Q99733 375 aaKnown RBP20.91■□□□□ 0.94
PSEN1-210ENST00000554131 RNF208Q9H0X6 261 aa20.91■□□□□ 0.94
PSEN1-210ENST00000554131 UPF3AQ9H1J1 476 aaKnown RBP20.91■□□□□ 0.94
PSEN1-210ENST00000554131 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.91■□□□□ 0.94
PSEN1-210ENST00000554131 NOL7Q9UMY1 257 aaKnown RBP20.91■□□□□ 0.94
PSEN1-210ENST00000554131 Q9Y3F1 56 aa20.91■□□□□ 0.94
PSEN1-210ENST00000554131 TELO2Q9Y4R8 837 aa20.91■□□□□ 0.94
PSEN1-210ENST00000554131 SYNRGQ9UMZ2 1314 aa20.9■□□□□ 0.94
PSEN1-210ENST00000554131 NKRFO15226 690 aaKnown RBP eCLIP20.9■□□□□ 0.94
PSEN1-210ENST00000554131 ADAMTS4O75173 837 aa20.9■□□□□ 0.94
PSEN1-210ENST00000554131 ATP2B1P20020 1258 aa20.9■□□□□ 0.94
PSEN1-210ENST00000554131 ORC2Q13416 577 aaPredicted RBP20.9■□□□□ 0.94
PSEN1-210ENST00000554131 CELF3Q5SZQ8 465 aaKnown RBP20.9■□□□□ 0.94
PSEN1-210ENST00000554131 FOXD4L5Q5VV16 416 aaPredicted RBP20.9■□□□□ 0.94
PSEN1-210ENST00000554131 FOXD4L4Q8WXT5 416 aaPredicted RBP20.9■□□□□ 0.94
PSEN1-210ENST00000554131 SLC5A5Q92911 643 aa20.9■□□□□ 0.94
PSEN1-210ENST00000554131 GJA10Q969M2 543 aa20.9■□□□□ 0.94
PSEN1-210ENST00000554131 MTMR9Q96QG7 549 aa20.9■□□□□ 0.94
PSEN1-210ENST00000554131 CRISPLD2Q9H0B8 497 aa20.9■□□□□ 0.94
PSEN1-210ENST00000554131 TMEM60Q9H2L4 133 aa20.9■□□□□ 0.94
PSEN1-210ENST00000554131 NFASCO94856 1347 aa20.89■□□□□ 0.93
PSEN1-210ENST00000554131 IPO5O00410 1097 aaKnown RBP20.89■□□□□ 0.93
PSEN1-210ENST00000554131 MSCO60682 206 aa20.89■□□□□ 0.93
PSEN1-210ENST00000554131 FARP2O94887 1054 aaPredicted RBP20.89■□□□□ 0.93
PSEN1-210ENST00000554131 GGPS1O95749 300 aa20.89■□□□□ 0.93
PSEN1-210ENST00000554131 GJB1P08034 283 aa20.89■□□□□ 0.93
PSEN1-210ENST00000554131 RARBP10826 455 aa20.89■□□□□ 0.93
PSEN1-210ENST00000554131 MCM7P33993 719 aa20.89■□□□□ 0.93
PSEN1-210ENST00000554131 GJA9P57773 515 aa20.89■□□□□ 0.93
PSEN1-210ENST00000554131 ZNF174Q15697 407 aa20.89■□□□□ 0.93
PSEN1-210ENST00000554131 TLK2Q86UE8 772 aa20.89■□□□□ 0.93
PSEN1-210ENST00000554131 DEFB118Q96PH6 123 aa20.89■□□□□ 0.93
PSEN1-210ENST00000554131 UIMC1Q96RL1 719 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms