RNA–Protein interactions for RNA: ENST00000553917.5

RALGAPA1-205, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 3

Gene RALGAPA1, Length 723 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-205	ENST00000553917	TCFL5	Q9UL49	500 aa		4.24	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	GPR55	Q9Y2T6	319 aa	Predicted RBP	4.24	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	MRPS23	Q9Y3D9	190 aa	Known RBP	4.24	□□□□□ -1.73
RALGAPA1-205	ENST00000553917		A0A087X0B3	334 aa		4.23	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	CCDC194	A0A1B0GVG4	234 aa		4.23	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	TMEM82	A0PJX8	343 aa		4.23	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	SH3D21	A4FU49	640 aa		4.23	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	PCBP3	P57721	371 aa	Known RBP	4.23	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	C21orf62-AS1	Q17RA5	79 aa		4.23	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	NBPF9	Q3BBW0	867 aa		4.23	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	BRDT	Q58F21	947 aa	Predicted RBP	4.23	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	NBPF12	Q5TAG4	269 aa	Predicted RBP	4.23	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	HEATR6	Q6AI08	1181 aa	Known RBP	4.23	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	RNF180	Q86T96	592 aa		4.23	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	JAML	Q86YT9	394 aa		4.23	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	4.23	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	ATL2	Q8NHH9	583 aa		4.23	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	TCTN2	Q96GX1	697 aa		4.23	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	EXOC2	Q96KP1	924 aa		4.23	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	SLC6A18	Q96N87	628 aa		4.23	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	HDAC8	Q9BY41	377 aa		4.23	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	SFMBT1	Q9UHJ3	866 aa		4.23	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	TSC22D4	Q9Y3Q8	395 aa		4.23	□□□□□ -1.73
RALGAPA1-205	ENST00000553917		A0A1W2PQU0	124 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	GSG1L2	A8MUP6	293 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	PRC1	O43663	620 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	CLEC3A	O75596	197 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	PRAMEF1	O95521	474 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	APP	P05067	770 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	SYP	P08247	313 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	L1CAM	P32004	1257 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	EPHB1	P54762	984 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	TGFB2	P61812	414 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	PPP2R2A	P63151	447 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	FHL2	Q14192	279 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	CBX2	Q14781	532 aa	Predicted RBP	4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	SMN1	Q16637	294 aa	Known RBP	4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	GORAB	Q5T7V8	394 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	GLB1L	Q6UWU2	654 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	ZNF575	Q86XF7	245 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	DDX42	Q86XP3	938 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	PALM2	Q8IXS6	379 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	TMEM192	Q8IY95	271 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	CCDC146	Q8IYE0	955 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	AHI1	Q8N157	1196 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	SYTL5	Q8TDW5	730 aa	Predicted RBP	4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	PPP1R14A	Q96A00	147 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	C8orf48	Q96LL4	319 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	HAUS7	Q99871	368 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	MYH16	Q9H6N6	1097 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	TNFRSF12A	Q9NP84	129 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	ARHGEF4	Q9NR80	690 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	EID1	Q9Y6B2	187 aa		4.22	□□□□□ -1.73
RALGAPA1-205	ENST00000553917	IRS2	Q9Y4H2	1338 aa		4.21	□□□□□ -1.73
RALGAPA1-205	ENST00000553917		A0A1W2PQ27	194 aa		4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917		A0A1W2PQ64	194 aa		4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917		A0A1W2PQC6	194 aa		4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917		A0A1W2PQD8	194 aa		4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	NOP56	O00567	594 aa	Known RBP	4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	RAPGEF3	O95398	923 aa		4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	EPHX1	P07099	455 aa		4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	FGFR1	P11362	822 aa		4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	MAPKAPK2	P49137	400 aa		4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	SARS	P49591	514 aa	Known RBP	4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	TBX4	P57082	545 aa		4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	FAM209A	Q5JX71	171 aa		4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	POMZP3	Q6PJE2	187 aa		4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	LIMS2	Q7Z4I7	341 aa		4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	LRRTM3	Q86VH5	581 aa		4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	ZNF227	Q86WZ6	799 aa		4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	CERS3	Q8IU89	383 aa		4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	CCDC144CP	Q8IYA2	1237 aa		4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	AFAP1L2	Q8N4X5	818 aa		4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	DAGLB	Q8NCG7	672 aa		4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	ENOX1	Q8TC92	643 aa	Known RBP	4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	TARS2	Q9BW92	718 aa	Known RBP	4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	ZNF341	Q9BYN7	854 aa		4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	TNFRSF10D	Q9UBN6	386 aa		4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	RIPOR2	Q9Y4F9	1068 aa		4.21	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	FADS2P1	A8MWK0	482 aa		4.2	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	MEIS1	O00470	390 aa		4.2	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	EIF5B	O60841	1220 aa	Known RBP	4.2	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	EFCAB14	O75071	495 aa		4.2	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	PPM1B	O75688	479 aa		4.2	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	ALDH1L1	O75891	902 aa		4.2	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	NPTXR	O95502	500 aa		4.2	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	ITGAV	P06756	1048 aa		4.2	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	ATF2	P15336	505 aa		4.2	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	POU3F3	P20264	500 aa	Predicted RBP	4.2	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	CEBPA	P49715	358 aa	Predicted RBP	4.2	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	INHBE	P58166	350 aa		4.2	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	EVA1C	P58658	441 aa		4.2	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	RNF4	P78317	190 aa		4.2	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	FAM50A	Q14320	339 aa	Known RBP	4.2	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	CDSN	Q15517	529 aa		4.2	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	TRIM61	Q5EBN2	209 aa		4.2	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.2	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	FOXB2	Q5VYV0	432 aa		4.2	□□□□□ -1.74
RALGAPA1-205	ENST00000553917	TDRD10	Q5VZ19	366 aa	Known RBP	4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms