RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 CLEC4DQ8WXI8 215 aa9.61□□□□□ -0.87
PSEN1-209ENST00000553855 SYMPKQ92797 1274 aaKnown RBP9.61□□□□□ -0.87
PSEN1-209ENST00000553855 PPP1R12CQ9BZL4 782 aa9.61□□□□□ -0.87
PSEN1-209ENST00000553855 C11orf49Q9H6J7 331 aa9.61□□□□□ -0.87
PSEN1-209ENST00000553855 VTA1Q9NP79 307 aa9.61□□□□□ -0.87
PSEN1-209ENST00000553855 PDRG1Q9NUG6 133 aa9.61□□□□□ -0.87
PSEN1-209ENST00000553855 NR2E3Q9Y5X4 410 aa9.61□□□□□ -0.87
PSEN1-209ENST00000553855 COL11A1P12107 1806 aaPredicted RBP9.61□□□□□ -0.87
PSEN1-209ENST00000553855 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.6□□□□□ -0.87
PSEN1-209ENST00000553855 SOWAHBA6NEL2 793 aa9.6□□□□□ -0.87
PSEN1-209ENST00000553855 CPLX1O14810 134 aa9.6□□□□□ -0.87
PSEN1-209ENST00000553855 ZEB2O60315 1214 aa9.6□□□□□ -0.87
PSEN1-209ENST00000553855 PLEKHA8P1O95397 391 aa9.6□□□□□ -0.87
PSEN1-209ENST00000553855 CPA1P15085 419 aa9.6□□□□□ -0.87
PSEN1-209ENST00000553855 TAL1P17542 331 aaPredicted RBP9.6□□□□□ -0.87
PSEN1-209ENST00000553855 RFX1P22670 979 aa9.6□□□□□ -0.87
PSEN1-209ENST00000553855 SOX11P35716 441 aa9.6□□□□□ -0.87
PSEN1-209ENST00000553855 TNFAIP2Q03169 654 aa9.6□□□□□ -0.87
PSEN1-209ENST00000553855 APOBRQ0VD83 1088 aa9.6□□□□□ -0.87
PSEN1-209ENST00000553855 BRDTQ58F21 947 aaPredicted RBP9.6□□□□□ -0.87
PSEN1-209ENST00000553855 ANO1Q5XXA6 986 aa9.6□□□□□ -0.87
PSEN1-209ENST00000553855 TMTC3Q6ZXV5 915 aa9.6□□□□□ -0.87
PSEN1-209ENST00000553855 RETREG3Q86VR2 466 aa9.6□□□□□ -0.87
PSEN1-209ENST00000553855 SMARCC2Q8TAQ2 1214 aa9.6□□□□□ -0.87
PSEN1-209ENST00000553855 SHISA4Q96DD7 197 aa9.6□□□□□ -0.87
PSEN1-209ENST00000553855 MTMR8Q96EF0 704 aa9.6□□□□□ -0.87
PSEN1-209ENST00000553855 PAWRQ96IZ0 340 aaKnown RBP9.6□□□□□ -0.87
PSEN1-209ENST00000553855 ZFRQ96KR1 1074 aaKnown RBP9.6□□□□□ -0.87
PSEN1-209ENST00000553855 IWS1Q96ST2 819 aa9.6□□□□□ -0.87
PSEN1-209ENST00000553855 RMDN3Q96TC7 470 aa9.6□□□□□ -0.87
PSEN1-209ENST00000553855 AP5M1Q9H0R1 490 aa9.6□□□□□ -0.87
PSEN1-209ENST00000553855 EHMT1Q9H9B1 1298 aa9.6□□□□□ -0.87
PSEN1-209ENST00000553855 hCG_1984214I3L0E3 225 aa9.59□□□□□ -0.87
PSEN1-209ENST00000553855 DNM1LO00429 736 aa9.59□□□□□ -0.87
PSEN1-209ENST00000553855 CYTH3O43739 400 aa9.59□□□□□ -0.87
PSEN1-209ENST00000553855 DUSP11O75319 330 aaKnown RBP9.59□□□□□ -0.87
PSEN1-209ENST00000553855 SNAI1O95863 264 aaPredicted RBP9.59□□□□□ -0.87
PSEN1-209ENST00000553855 ZNF865P0CJ78 1059 aaPredicted RBP9.59□□□□□ -0.87
PSEN1-209ENST00000553855 PTPN5P54829 565 aa9.59□□□□□ -0.87
PSEN1-209ENST00000553855 NR6A1Q15406 480 aa9.59□□□□□ -0.87
PSEN1-209ENST00000553855 STXBP2Q15833 593 aa9.59□□□□□ -0.87
PSEN1-209ENST00000553855 CCDC144BQ3MJ40 725 aa9.59□□□□□ -0.87
PSEN1-209ENST00000553855 IQSEC1Q6DN90 963 aa9.59□□□□□ -0.87
PSEN1-209ENST00000553855 EEPD1Q7L9B9 569 aa9.59□□□□□ -0.87
PSEN1-209ENST00000553855 HEATR3Q7Z4Q2 680 aa9.59□□□□□ -0.87
PSEN1-209ENST00000553855 TRIM22Q8IYM9 498 aa9.59□□□□□ -0.87
PSEN1-209ENST00000553855 FBXL16Q8N461 479 aa9.59□□□□□ -0.87
PSEN1-209ENST00000553855 SRBD1Q8N5C6 995 aaKnown RBP9.59□□□□□ -0.87
PSEN1-209ENST00000553855 ZNF713Q8N859 430 aaPredicted RBP9.59□□□□□ -0.87
PSEN1-209ENST00000553855 PCSK9Q8NBP7 692 aaKnown RBP9.59□□□□□ -0.87
PSEN1-209ENST00000553855 TRPV1Q8NER1 839 aa9.59□□□□□ -0.87
PSEN1-209ENST00000553855 SYTL5Q8TDW5 730 aaPredicted RBP9.59□□□□□ -0.87
PSEN1-209ENST00000553855 CCDC12Q8WUD4 166 aaPredicted RBP9.59□□□□□ -0.87
PSEN1-209ENST00000553855 UPF3BQ9BZI7 483 aaKnown RBP9.59□□□□□ -0.87
PSEN1-209ENST00000553855 GLT8D2Q9H1C3 349 aa9.59□□□□□ -0.87
PSEN1-209ENST00000553855 HCSTQ9UBK5 93 aa9.59□□□□□ -0.87
PSEN1-209ENST00000553855 BRPF3Q9ULD4 1205 aa9.59□□□□□ -0.87
PSEN1-209ENST00000553855 DOCK3Q8IZD9 2030 aa9.58□□□□□ -0.88
PSEN1-209ENST00000553855 SPDYE3A6NKU9 549 aa9.58□□□□□ -0.88
PSEN1-209ENST00000553855 NKRFO15226 690 aaKnown RBP eCLIP9.58□□□□□ -0.88
PSEN1-209ENST00000553855 IGHA2P01877 340 aa9.58□□□□□ -0.88
PSEN1-209ENST00000553855 C6orf222P0C671 652 aaPredicted RBP9.58□□□□□ -0.88
PSEN1-209ENST00000553855 EIF2AK2P19525 551 aaKnown RBP9.58□□□□□ -0.88
PSEN1-209ENST00000553855 NAPAP54920 295 aa9.58□□□□□ -0.88
PSEN1-209ENST00000553855 TTLL4Q14679 1199 aa9.58□□□□□ -0.88
PSEN1-209ENST00000553855 GJC2Q5T442 439 aaPredicted RBP9.58□□□□□ -0.88
PSEN1-209ENST00000553855 FCHSD1Q86WN1 690 aa9.58□□□□□ -0.88
PSEN1-209ENST00000553855 FBXO16Q8IX29 292 aaPredicted RBP9.58□□□□□ -0.88
PSEN1-209ENST00000553855 CMTR1Q8N1G2 835 aaKnown RBP9.58□□□□□ -0.88
PSEN1-209ENST00000553855 SCFD2Q8WU76 684 aa9.58□□□□□ -0.88
PSEN1-209ENST00000553855 VTI1AQ96AJ9 217 aa9.58□□□□□ -0.88
PSEN1-209ENST00000553855 TAAR1Q96RJ0 339 aa9.58□□□□□ -0.88
PSEN1-209ENST00000553855 SENP6Q9GZR1 1112 aaPredicted RBP9.58□□□□□ -0.88
PSEN1-209ENST00000553855 PSTPIP2Q9H939 334 aa9.58□□□□□ -0.88
PSEN1-209ENST00000553855 USTQ9Y2C2 406 aa9.58□□□□□ -0.88
PSEN1-209ENST00000553855 V9GY48 417 aaPredicted RBP9.58□□□□□ -0.88
PSEN1-209ENST00000553855 DYNC1LI2O43237 492 aaPredicted RBP9.57□□□□□ -0.88
PSEN1-209ENST00000553855 PPP1R11O60927 126 aaPredicted RBP9.57□□□□□ -0.88
PSEN1-209ENST00000553855 EIF3JO75822 258 aaKnown RBP9.57□□□□□ -0.88
PSEN1-209ENST00000553855 CDKL5O76039 1030 aa9.57□□□□□ -0.88
PSEN1-209ENST00000553855 PGK1P00558 417 aa9.57□□□□□ -0.88
PSEN1-209ENST00000553855 NR3C2P08235 984 aa9.57□□□□□ -0.88
PSEN1-209ENST00000553855 MYCLP12524 364 aaPredicted RBP9.57□□□□□ -0.88
PSEN1-209ENST00000553855 CCND2P30279 289 aa9.57□□□□□ -0.88
PSEN1-209ENST00000553855 HOXA13P31271 388 aaPredicted RBP9.57□□□□□ -0.88
PSEN1-209ENST00000553855 ADCYAP1R1P41586 468 aa9.57□□□□□ -0.88
PSEN1-209ENST00000553855 HSD17B4P51659 736 aa9.57□□□□□ -0.88
PSEN1-209ENST00000553855 LRRC41Q15345 812 aa9.57□□□□□ -0.88
PSEN1-209ENST00000553855 GNPTABQ3T906 1256 aa9.57□□□□□ -0.88
PSEN1-209ENST00000553855 GNASQ5JWF2 1037 aa9.57□□□□□ -0.88
PSEN1-209ENST00000553855 DESI1Q6ICB0 168 aa9.57□□□□□ -0.88
PSEN1-209ENST00000553855 PPP1R18Q6NYC8 613 aa9.57□□□□□ -0.88
PSEN1-209ENST00000553855 KCNV1Q6PIU1 500 aa9.57□□□□□ -0.88
PSEN1-209ENST00000553855 TEX2Q8IWB9 1127 aa9.57□□□□□ -0.88
PSEN1-209ENST00000553855 MORC4Q8TE76 937 aa9.57□□□□□ -0.88
PSEN1-209ENST00000553855 DIS3LQ8TF46 1054 aaKnown RBP9.57□□□□□ -0.88
PSEN1-209ENST00000553855 TBC1D5Q92609 795 aa9.57□□□□□ -0.88
PSEN1-209ENST00000553855 ZNF274Q96GC6 653 aaPredicted RBP9.57□□□□□ -0.88
PSEN1-209ENST00000553855 FGD4Q96M96 766 aa9.57□□□□□ -0.88
PSEN1-209ENST00000553855 PURBQ96QR8 312 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms