RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 PXMP2Q9NR77 195 aa9.47□□□□□ -0.89
RDH11-205ENST00000553816 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.47□□□□□ -0.89
RDH11-205ENST00000553816 LTBP2Q14767 1821 aa9.47□□□□□ -0.89
RDH11-205ENST00000553816 LOC102724159A0A0B4J2E5 919 aa9.46□□□□□ -0.9
RDH11-205ENST00000553816 RBM47A0AV96 593 aaKnown RBP9.46□□□□□ -0.9
RDH11-205ENST00000553816 GCOM1H8Y6P7 765 aaPredicted RBP9.46□□□□□ -0.9
RDH11-205ENST00000553816 POLR2MP0CAP2 368 aa9.46□□□□□ -0.9
RDH11-205ENST00000553816 RCAN1P53805 252 aa9.46□□□□□ -0.9
RDH11-205ENST00000553816 GJA9P57773 515 aa9.46□□□□□ -0.9
RDH11-205ENST00000553816 ANAPC15P60006 121 aa9.46□□□□□ -0.9
RDH11-205ENST00000553816 BEX3Q00994 111 aa9.46□□□□□ -0.9
RDH11-205ENST00000553816 PDE4DQ08499 809 aa9.46□□□□□ -0.9
RDH11-205ENST00000553816 NBR1Q14596 966 aa9.46□□□□□ -0.9
RDH11-205ENST00000553816 PGM5Q15124 567 aa9.46□□□□□ -0.9
RDH11-205ENST00000553816 PWP2Q15269 919 aaKnown RBP9.46□□□□□ -0.9
RDH11-205ENST00000553816 PKN1Q16512 942 aa9.46□□□□□ -0.9
RDH11-205ENST00000553816 UBE2SQ16763 222 aa9.46□□□□□ -0.9
RDH11-205ENST00000553816 HEATR3Q7Z4Q2 680 aa9.46□□□□□ -0.9
RDH11-205ENST00000553816 ARRDC4Q8NCT1 418 aa9.46□□□□□ -0.9
RDH11-205ENST00000553816 NSUN6Q8TEA1 469 aaKnown RBP9.46□□□□□ -0.9
RDH11-205ENST00000553816 DPF3Q92784 378 aa9.46□□□□□ -0.9
RDH11-205ENST00000553816 PHKBQ93100 1093 aa9.46□□□□□ -0.9
RDH11-205ENST00000553816 IL17RAQ96F46 866 aa9.46□□□□□ -0.9
RDH11-205ENST00000553816 PDCD2LQ9BRP1 358 aa9.46□□□□□ -0.9
RDH11-205ENST00000553816 UPF3AQ9H1J1 476 aaKnown RBP9.46□□□□□ -0.9
RDH11-205ENST00000553816 VTA1Q9NP79 307 aa9.46□□□□□ -0.9
RDH11-205ENST00000553816 PDRG1Q9NUG6 133 aa9.46□□□□□ -0.9
RDH11-205ENST00000553816 SEC63Q9UGP8 760 aaKnown RBP9.46□□□□□ -0.9
RDH11-205ENST00000553816 GTF3C3Q9Y5Q9 886 aa9.46□□□□□ -0.9
RDH11-205ENST00000553816 STXBP3O00186 592 aa9.45□□□□□ -0.9
RDH11-205ENST00000553816 DYNC1LI2O43237 492 aaPredicted RBP9.45□□□□□ -0.9
RDH11-205ENST00000553816 MAP3K7O43318 606 aa9.45□□□□□ -0.9
RDH11-205ENST00000553816 LARGE1O95461 756 aa9.45□□□□□ -0.9
RDH11-205ENST00000553816 NR3C2P08235 984 aa9.45□□□□□ -0.9
RDH11-205ENST00000553816 C6orf222P0C671 652 aaPredicted RBP9.45□□□□□ -0.9
RDH11-205ENST00000553816 MYCLP12524 364 aaPredicted RBP9.45□□□□□ -0.9
RDH11-205ENST00000553816 AK2P54819 239 aa9.45□□□□□ -0.9
RDH11-205ENST00000553816 MRPS9P82933 396 aaKnown RBP9.45□□□□□ -0.9
RDH11-205ENST00000553816 STK3Q13188 491 aa9.45□□□□□ -0.9
RDH11-205ENST00000553816 KCNA10Q16322 511 aa9.45□□□□□ -0.9
RDH11-205ENST00000553816 DUSP28Q4G0W2 176 aa9.45□□□□□ -0.9
RDH11-205ENST00000553816 ARHGEF16Q5VV41 709 aa9.45□□□□□ -0.9
RDH11-205ENST00000553816 IQSEC1Q6DN90 963 aa9.45□□□□□ -0.9
RDH11-205ENST00000553816 CCDC62Q6P9F0 684 aa9.45□□□□□ -0.9
RDH11-205ENST00000553816 SEPT14Q6ZU15 432 aa9.45□□□□□ -0.9
RDH11-205ENST00000553816 NOL8Q76FK4 1167 aaKnown RBP9.45□□□□□ -0.9
RDH11-205ENST00000553816 KIF2CQ99661 725 aa9.45□□□□□ -0.9
RDH11-205ENST00000553816 HTATIP2Q9BUP3 242 aa9.45□□□□□ -0.9
RDH11-205ENST00000553816 WDR11Q9BZH6 1224 aa9.45□□□□□ -0.9
RDH11-205ENST00000553816 MAF1Q9H063 256 aa9.45□□□□□ -0.9
RDH11-205ENST00000553816 MAP3K20Q9NYL2 800 aaKnown RBP9.45□□□□□ -0.9
RDH11-205ENST00000553816 TPCN1Q9ULQ1 816 aa9.45□□□□□ -0.9
RDH11-205ENST00000553816 PHF24Q9UPV7 400 aa9.45□□□□□ -0.9
RDH11-205ENST00000553816 A0A1W2PQ45 241 aaPredicted RBP9.44□□□□□ -0.9
RDH11-205ENST00000553816 A0A1W2PQY0 241 aa9.44□□□□□ -0.9
RDH11-205ENST00000553816 KBTBD13C9JR72 458 aa9.44□□□□□ -0.9
RDH11-205ENST00000553816 H0YGN5 161 aa9.44□□□□□ -0.9
RDH11-205ENST00000553816 PIK3CDO00329 1044 aa9.44□□□□□ -0.9
RDH11-205ENST00000553816 PRPF3O43395 683 aaKnown RBP9.44□□□□□ -0.9
RDH11-205ENST00000553816 ASGR1P07306 291 aa9.44□□□□□ -0.9
RDH11-205ENST00000553816 CST5P28325 142 aaPredicted RBP9.44□□□□□ -0.9
RDH11-205ENST00000553816 ACLYP53396 1101 aa9.44□□□□□ -0.9
RDH11-205ENST00000553816 NKX3-2P78367 333 aa9.44□□□□□ -0.9
RDH11-205ENST00000553816 TRAF1Q13077 416 aa9.44□□□□□ -0.9
RDH11-205ENST00000553816 PPP2R5BQ15173 497 aa9.44□□□□□ -0.9
RDH11-205ENST00000553816 STXBP2Q15833 593 aa9.44□□□□□ -0.9
RDH11-205ENST00000553816 LY6KQ17RY6 165 aa9.44□□□□□ -0.9
RDH11-205ENST00000553816 SLC39A5Q6ZMH5 540 aa9.44□□□□□ -0.9
RDH11-205ENST00000553816 RNF180Q86T96 592 aa9.44□□□□□ -0.9
RDH11-205ENST00000553816 TLK2Q86UE8 772 aa9.44□□□□□ -0.9
RDH11-205ENST00000553816 VSIG10LQ86VR7 867 aa9.44□□□□□ -0.9
RDH11-205ENST00000553816 C7orf61Q8IZ16 206 aa9.44□□□□□ -0.9
RDH11-205ENST00000553816 SAMD3Q8N6K7 520 aa9.44□□□□□ -0.9
RDH11-205ENST00000553816 ZNF274Q96GC6 653 aaPredicted RBP9.44□□□□□ -0.9
RDH11-205ENST00000553816 PGBD1Q96JS3 809 aa9.44□□□□□ -0.9
RDH11-205ENST00000553816 IWS1Q96ST2 819 aa9.44□□□□□ -0.9
RDH11-205ENST00000553816 ALDH8A1Q9H2A2 487 aaPredicted RBP9.44□□□□□ -0.9
RDH11-205ENST00000553816 BCAS3Q9H6U6 928 aa9.44□□□□□ -0.9
RDH11-205ENST00000553816 FRMPD4Q14CM0 1322 aa9.44□□□□□ -0.9
RDH11-205ENST00000553816 PDE4DIPQ5VU43 2346 aa9.44□□□□□ -0.9
RDH11-205ENST00000553816 DNAH12Q6ZR08 3092 aa9.44□□□□□ -0.9
RDH11-205ENST00000553816 SCN10AQ9Y5Y9 1956 aa9.43□□□□□ -0.9
RDH11-205ENST00000553816 CCDC196A0A1B0GTZ2 297 aa9.43□□□□□ -0.9
RDH11-205ENST00000553816 TXNP10599 105 aaKnown RBP9.43□□□□□ -0.9
RDH11-205ENST00000553816 SCG2P13521 617 aa9.43□□□□□ -0.9
RDH11-205ENST00000553816 IFNAR1P17181 557 aa9.43□□□□□ -0.9
RDH11-205ENST00000553816 SYN1P17600 705 aa9.43□□□□□ -0.9
RDH11-205ENST00000553816 NAPAP54920 295 aa9.43□□□□□ -0.9
RDH11-205ENST00000553816 RTP1P59025 263 aa9.43□□□□□ -0.9
RDH11-205ENST00000553816 SP2Q02086 613 aa9.43□□□□□ -0.9
RDH11-205ENST00000553816 SCRN1Q12765 414 aa9.43□□□□□ -0.9
RDH11-205ENST00000553816 SNX17Q15036 470 aa9.43□□□□□ -0.9
RDH11-205ENST00000553816 FSCN1Q16658 493 aaKnown RBP9.43□□□□□ -0.9
RDH11-205ENST00000553816 PFKFB3Q16875 520 aaPredicted RBP9.43□□□□□ -0.9
RDH11-205ENST00000553816 GNASQ5JWF2 1037 aa9.43□□□□□ -0.9
RDH11-205ENST00000553816 SMARCC2Q8TAQ2 1214 aa9.43□□□□□ -0.9
RDH11-205ENST00000553816 SCFD2Q8WU76 684 aa9.43□□□□□ -0.9
RDH11-205ENST00000553816 PPP1R13LQ8WUF5 828 aa9.43□□□□□ -0.9
RDH11-205ENST00000553816 TSEN34Q9BSV6 310 aaKnown RBP9.43□□□□□ -0.9
RDH11-205ENST00000553816 SLC26A6Q9BXS9 759 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms