RNA–Protein interactions for RNA: ENST00000553636.1

CCNK-202, Transcript of cyclin K, humanhuman

TSL 2

Gene CCNK, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-202ENST00000553636 TMEM240Q5SV17 173 aa13.36□□□□□ -0.27
CCNK-202ENST00000553636 CELF3Q5SZQ8 465 aaKnown RBP13.36□□□□□ -0.27
CCNK-202ENST00000553636 MYSM1Q5VVJ2 828 aa13.36□□□□□ -0.27
CCNK-202ENST00000553636 WWC2Q6AWC2 1192 aa13.36□□□□□ -0.27
CCNK-202ENST00000553636 PSRC1Q6PGN9 363 aaPredicted RBP13.36□□□□□ -0.27
CCNK-202ENST00000553636 Q6ZUG5 572 aa13.36□□□□□ -0.27
CCNK-202ENST00000553636 C16orf59Q7L2K0 433 aa13.36□□□□□ -0.27
CCNK-202ENST00000553636 PPTC7Q8NI37 304 aa13.36□□□□□ -0.27
CCNK-202ENST00000553636 KAT2BQ92831 832 aa13.36□□□□□ -0.27
CCNK-202ENST00000553636 FAM161BQ96MY7 647 aa13.36□□□□□ -0.27
CCNK-202ENST00000553636 SPATA33Q96N06 139 aa13.36□□□□□ -0.27
CCNK-202ENST00000553636 PSTPIP2Q9H939 334 aa13.36□□□□□ -0.27
CCNK-202ENST00000553636 IL23AQ9NPF7 189 aa13.36□□□□□ -0.27
CCNK-202ENST00000553636 NOD1Q9Y239 953 aa13.36□□□□□ -0.27
CCNK-202ENST00000553636 STAM2O75886 525 aa13.35□□□□□ -0.27
CCNK-202ENST00000553636 CDC27P30260 824 aa13.35□□□□□ -0.27
CCNK-202ENST00000553636 PSEN2P49810 448 aa13.35□□□□□ -0.27
CCNK-202ENST00000553636 SMAD3P84022 425 aaKnown RBP13.35□□□□□ -0.27
CCNK-202ENST00000553636 PTPN11Q06124 597 aaPredicted RBP13.35□□□□□ -0.27
CCNK-202ENST00000553636 FUT2Q10981 343 aa13.35□□□□□ -0.27
CCNK-202ENST00000553636 HSDL1Q3SXM5 330 aa13.35□□□□□ -0.27
CCNK-202ENST00000553636 ZNF697Q5TEC3 545 aa13.35□□□□□ -0.27
CCNK-202ENST00000553636 ZNF365Q70YC5 407 aa13.35□□□□□ -0.27
CCNK-202ENST00000553636 BRF1Q92994 677 aa13.35□□□□□ -0.27
CCNK-202ENST00000553636 SCLYQ96I15 445 aa13.35□□□□□ -0.27
CCNK-202ENST00000553636 INPP4AQ96PE3 977 aaPredicted RBP13.35□□□□□ -0.27
CCNK-202ENST00000553636 ALG1Q9BT22 464 aa13.35□□□□□ -0.27
CCNK-202ENST00000553636 MLXIPQ9HAP2 919 aa13.35□□□□□ -0.27
CCNK-202ENST00000553636 MTMR10Q9NXD2 777 aa13.35□□□□□ -0.27
CCNK-202ENST00000553636 SPDYE3A6NKU9 549 aa13.34□□□□□ -0.27
CCNK-202ENST00000553636 FIBPO43427 364 aa13.34□□□□□ -0.27
CCNK-202ENST00000553636 F2P00734 622 aa13.34□□□□□ -0.27
CCNK-202ENST00000553636 TGFB3P10600 412 aa13.34□□□□□ -0.27
CCNK-202ENST00000553636 RPS6KB1P23443 525 aa13.34□□□□□ -0.27
CCNK-202ENST00000553636 METAP2P50579 478 aaKnown RBP eCLIP13.34□□□□□ -0.27
CCNK-202ENST00000553636 NAPAP54920 295 aa13.34□□□□□ -0.27
CCNK-202ENST00000553636 SEMA3FQ13275 785 aa13.34□□□□□ -0.27
CCNK-202ENST00000553636 MFSD10Q14728 455 aa13.34□□□□□ -0.27
CCNK-202ENST00000553636 PTGISQ16647 500 aa13.34□□□□□ -0.27
CCNK-202ENST00000553636 PCNX4Q63HM2 1172 aa13.34□□□□□ -0.27
CCNK-202ENST00000553636 GDF6Q6KF10 455 aaPredicted RBP13.34□□□□□ -0.27
CCNK-202ENST00000553636 KATNAL1Q9BW62 490 aa13.34□□□□□ -0.27
CCNK-202ENST00000553636 BCAS3Q9H6U6 928 aa13.34□□□□□ -0.27
CCNK-202ENST00000553636 FAM217BQ9NTX9 383 aaPredicted RBP13.34□□□□□ -0.27
CCNK-202ENST00000553636 V9GY48 417 aaPredicted RBP13.34□□□□□ -0.27
CCNK-202ENST00000553636 GBF1Q92538 1859 aa13.33□□□□□ -0.27
CCNK-202ENST00000553636 SPATA31C2B4DYI2 1134 aa13.33□□□□□ -0.28
CCNK-202ENST00000553636 NOP56O00567 594 aaKnown RBP13.33□□□□□ -0.28
CCNK-202ENST00000553636 CENPBP07199 599 aaPredicted RBP13.33□□□□□ -0.28
CCNK-202ENST00000553636 HOXD8P13378 290 aaPredicted RBP13.33□□□□□ -0.28
CCNK-202ENST00000553636 ICAM3P32942 547 aa13.33□□□□□ -0.28
CCNK-202ENST00000553636 ADD1P35611 737 aaKnown RBP13.33□□□□□ -0.28
CCNK-202ENST00000553636 RCAN1P53805 252 aa13.33□□□□□ -0.28
CCNK-202ENST00000553636 KIAA0753Q2KHM9 967 aa13.33□□□□□ -0.28
CCNK-202ENST00000553636 FAM109BQ6ICB4 259 aaPredicted RBP13.33□□□□□ -0.28
CCNK-202ENST00000553636 TYW1BQ6NUM6 668 aa13.33□□□□□ -0.28
CCNK-202ENST00000553636 PPP1R18Q6NYC8 613 aa13.33□□□□□ -0.28
CCNK-202ENST00000553636 CYFIP1Q7L576 1253 aa13.33□□□□□ -0.28
CCNK-202ENST00000553636 OTOP2Q7RTS6 562 aa13.33□□□□□ -0.28
CCNK-202ENST00000553636 SESTD1Q86VW0 696 aa13.33□□□□□ -0.28
CCNK-202ENST00000553636 C7orf31Q8N865 590 aa13.33□□□□□ -0.28
CCNK-202ENST00000553636 HDAC6Q9UBN7 1215 aa13.33□□□□□ -0.28
CCNK-202ENST00000553636 PCDHA6Q9UN73 950 aa13.33□□□□□ -0.28
CCNK-202ENST00000553636 PCDHA8Q9Y5H6 950 aa13.33□□□□□ -0.28
CCNK-202ENST00000553636 TRIP12Q14669 1992 aaPredicted RBP13.32□□□□□ -0.28
CCNK-202ENST00000553636 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.32□□□□□ -0.28
CCNK-202ENST00000553636 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.32□□□□□ -0.28
CCNK-202ENST00000553636 STXBP3O00186 592 aa13.32□□□□□ -0.28
CCNK-202ENST00000553636 PPFIA4O75335 1185 aa13.32□□□□□ -0.28
CCNK-202ENST00000553636 FGBP02675 491 aa13.32□□□□□ -0.28
CCNK-202ENST00000553636 PSMA5P28066 241 aa13.32□□□□□ -0.28
CCNK-202ENST00000553636 ADCY7P51828 1080 aa13.32□□□□□ -0.28
CCNK-202ENST00000553636 SP4Q02446 784 aa13.32□□□□□ -0.28
CCNK-202ENST00000553636 BFSP2Q13515 415 aa13.32□□□□□ -0.28
CCNK-202ENST00000553636 NEDD9Q14511 834 aa13.32□□□□□ -0.28
CCNK-202ENST00000553636 ERICH6BQ5W0A0 696 aa13.32□□□□□ -0.28
CCNK-202ENST00000553636 XRRA1Q6P2D8 792 aa13.32□□□□□ -0.28
CCNK-202ENST00000553636 METTL7BQ6UX53 244 aa13.32□□□□□ -0.28
CCNK-202ENST00000553636 DEFB128Q7Z7B8 93 aa13.32□□□□□ -0.28
CCNK-202ENST00000553636 NLRX1Q86UT6 975 aa13.32□□□□□ -0.28
CCNK-202ENST00000553636 RETREG2Q8NC44 543 aa13.32□□□□□ -0.28
CCNK-202ENST00000553636 PGBD1Q96JS3 809 aa13.32□□□□□ -0.28
CCNK-202ENST00000553636 MTIF3Q9H2K0 278 aaKnown RBP13.32□□□□□ -0.28
CCNK-202ENST00000553636 PKD2L1Q9P0L9 805 aa13.32□□□□□ -0.28
CCNK-202ENST00000553636 CXXC1Q9P0U4 656 aaPredicted RBP13.32□□□□□ -0.28
CCNK-202ENST00000553636 GTF2IRD1Q9UHL9 959 aa13.32□□□□□ -0.28
CCNK-202ENST00000553636 CCDC196A0A1B0GTZ2 297 aa13.31□□□□□ -0.28
CCNK-202ENST00000553636 GRXCR1A8MXD5 290 aa13.31□□□□□ -0.28
CCNK-202ENST00000553636 HAS3O00219 553 aa13.31□□□□□ -0.28
CCNK-202ENST00000553636 PITPNM1O00562 1244 aa13.31□□□□□ -0.28
CCNK-202ENST00000553636 LGALS2P05162 132 aa13.31□□□□□ -0.28
CCNK-202ENST00000553636 DNAJB2P25686 324 aa13.31□□□□□ -0.28
CCNK-202ENST00000553636 RASIP1Q5U651 963 aa13.31□□□□□ -0.28
CCNK-202ENST00000553636 RPUSD2Q8IZ73 545 aaKnown RBP13.31□□□□□ -0.28
CCNK-202ENST00000553636 HERVK_113Q902F9 699 aa13.31□□□□□ -0.28
CCNK-202ENST00000553636 GUCD1Q96NT3 240 aa13.31□□□□□ -0.28
CCNK-202ENST00000553636 CTAGE1Q96RT6 745 aa13.31□□□□□ -0.28
CCNK-202ENST00000553636 C16orf70Q9BSU1 422 aa13.31□□□□□ -0.28
CCNK-202ENST00000553636 EHMT1Q9H9B1 1298 aa13.31□□□□□ -0.28
CCNK-202ENST00000553636 RIC8AQ9NPQ8 531 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms