RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 NAPAP54920 295 aa6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 FANCCQ00597 558 aa6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 PDIA5Q14554 519 aa6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 CCDC144BQ3MJ40 725 aa6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 CERKLQ49MI3 558 aaPredicted RBP6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 SOGA3Q5TF21 947 aa6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 PRPF38BQ5VTL8 546 aaKnown RBP6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 TMEM179Q6ZVK1 233 aa6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 HEATR3Q7Z4Q2 680 aa6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 NEK8Q86SG6 692 aa6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 SIAH1Q8IUQ4 282 aa6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 KIAA0825Q8IV33 1275 aa6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 ZFPM1Q8IX07 1006 aa6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 DRC7Q8IY82 874 aa6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 CACTINQ8WUQ7 758 aaKnown RBP6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 DCAF4Q8WV16 495 aa6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 GPKOWQ92917 476 aaPredicted RBP eCLIP6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 PIGSQ96S52 555 aa6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 GTPBP4Q9BZE4 634 aaKnown RBP6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 DNAJC18Q9H819 358 aa6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 JMJD4Q9H9V9 463 aa6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 MAGEF1Q9HAY2 307 aa6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 POLMQ9NP87 494 aaPredicted RBP6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 RIC8AQ9NPQ8 531 aa6.8□□□□□ -1.32
VIPAS39-204ENST00000553576 ZBTB5O15062 677 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 SLC26A4O43511 780 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 EDIL3O43854 480 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 TXLNAP40222 546 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 UBASH3AP57075 661 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 TGFB2P61812 414 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 RELBQ01201 579 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 CUL4BQ13620 913 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 KCNB1Q14721 858 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 AOC3Q16853 763 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 INF2Q27J81 1249 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 CCDC93Q567U6 631 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 SPATA1Q5VX52 437 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 MCTP2Q6DN12 878 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 PPP4R3AQ6IN85 833 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 BTNL9Q6UXG8 535 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 ADGRF4Q8IZF3 695 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 PDILTQ8N807 584 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 IGSF22Q8N9C0 903 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 GMCL1P1Q8NEA9 526 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 AGBL3Q8NEM8 1001 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 RASGRP4Q8TDF6 673 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 DHX58Q96C10 678 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 PRMT6Q96LA8 375 aaPredicted RBP6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 MTMR9Q96QG7 549 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 MED15Q96RN5 788 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 NAP1L4Q99733 375 aaKnown RBP6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 XPO4Q9C0E2 1151 aaKnown RBP6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 UBA5Q9GZZ9 404 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 TMEM60Q9H2L4 133 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 DISC1Q9NRI5 854 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 KBTBD4Q9NVX7 518 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 FANCLQ9NW38 375 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 IFNKQ9P0W0 207 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 HERC5Q9UII4 1024 aaKnown RBP6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 PYCARDQ9ULZ3 195 aa6.79□□□□□ -1.32
VIPAS39-204ENST00000553576 PPIP5K2O43314 1243 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 C21orf2O43822 256 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 PLA2G6O60733 806 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 TUBB4AP04350 444 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 TPM2P07951 284 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 OR52Z1P0C646 297 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 EEF2P13639 858 aaKnown RBP6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 LMOD1P29536 600 aaPredicted RBP6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 UBA7P41226 1012 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 USP11P51784 963 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 ADCY7P51828 1080 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 MRPL12P52815 198 aaKnown RBP6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 TBX2Q13207 712 aaPredicted RBP6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 SF3B2Q13435 895 aaKnown RBP6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 NR1I3Q14994 352 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 CFAP100Q494V2 611 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 COBLL1Q53SF7 1204 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 NAALADL2Q58DX5 795 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 ZNF658Q5TYW1 1059 aaPredicted RBP6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 RRAGBQ5VZM2 374 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 ISM2Q6H9L7 571 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 CNNM4Q6P4Q7 775 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 FAM83AQ86UY5 434 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 CCDC125Q86Z20 511 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 VSTM4Q8IW00 320 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 REXO1Q8N1G1 1221 aaKnown RBP6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 CCDC150Q8NCX0 1101 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 TBCKQ8TEA7 893 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 FAM151AQ8WW52 585 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 GMCL1Q96IK5 515 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 ZBED3Q96IU2 234 aaPredicted RBP6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 PRIMPOLQ96LW4 560 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 C7orf25Q9BPX7 421 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 CPVLQ9H3G5 476 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 TMX1Q9H3N1 280 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 VAT1LQ9HCJ6 419 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 RMND1Q9NWS8 449 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 HDAC9Q9UKV0 1011 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 PCDHAC2Q9Y5I4 1007 aa6.78□□□□□ -1.32
VIPAS39-204ENST00000553576 ATAD5Q96QE3 1844 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms