RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 NLRX1Q86UT6 975 aa26.07■■□□□ 1.76
TDP1-206ENST00000553569 AFG1LQ8WV93 481 aa26.07■■□□□ 1.76
TDP1-206ENST00000553569 WASF1Q92558 559 aa26.07■■□□□ 1.76
TDP1-206ENST00000553569 ALG1Q9BT22 464 aa26.07■■□□□ 1.76
TDP1-206ENST00000553569 KCNJ14Q9UNX9 436 aa26.07■■□□□ 1.76
TDP1-206ENST00000553569 ATP11BQ9Y2G3 1177 aa26.07■■□□□ 1.76
TDP1-206ENST00000553569 GGPS1O95749 300 aa26.06■■□□□ 1.76
TDP1-206ENST00000553569 FDPSP14324 419 aaKnown RBP26.06■■□□□ 1.76
TDP1-206ENST00000553569 ICAM3P32942 547 aa26.06■■□□□ 1.76
TDP1-206ENST00000553569 SREBF1P36956 1147 aa26.06■■□□□ 1.76
TDP1-206ENST00000553569 FOSBP53539 338 aa26.06■■□□□ 1.76
TDP1-206ENST00000553569 SP2Q02086 613 aa26.06■■□□□ 1.76
TDP1-206ENST00000553569 BRDTQ58F21 947 aaPredicted RBP26.06■■□□□ 1.76
TDP1-206ENST00000553569 DHX37Q8IY37 1157 aaKnown RBP26.06■■□□□ 1.76
TDP1-206ENST00000553569 PCDHA4Q9UN74 947 aa26.06■■□□□ 1.76
TDP1-206ENST00000553569 SPATA31C2B4DYI2 1134 aa26.05■■□□□ 1.76
TDP1-206ENST00000553569 CD2BP2O95400 341 aaKnown RBP26.05■■□□□ 1.76
TDP1-206ENST00000553569 TGFB3P10600 412 aa26.05■■□□□ 1.76
TDP1-206ENST00000553569 XBP1P17861 261 aa26.05■■□□□ 1.76
TDP1-206ENST00000553569 ITGB5P18084 799 aa26.05■■□□□ 1.76
TDP1-206ENST00000553569 ARHGAP4P98171 946 aa26.05■■□□□ 1.76
TDP1-206ENST00000553569 TRIM60Q495X7 471 aa26.05■■□□□ 1.76
TDP1-206ENST00000553569 MCTP2Q6DN12 878 aa26.05■■□□□ 1.76
TDP1-206ENST00000553569 GJB4Q9NTQ9 266 aa26.05■■□□□ 1.76
TDP1-206ENST00000553569 UBIAD1Q9Y5Z9 338 aa26.05■■□□□ 1.76
TDP1-206ENST00000553569 MMP3P08254 477 aa26.04■■□□□ 1.76
TDP1-206ENST00000553569 MTMR1Q13613 665 aa26.04■■□□□ 1.76
TDP1-206ENST00000553569 LAMC2Q13753 1193 aa26.04■■□□□ 1.76
TDP1-206ENST00000553569 SNX17Q15036 470 aa26.04■■□□□ 1.76
TDP1-206ENST00000553569 CELF3Q5SZQ8 465 aaKnown RBP26.04■■□□□ 1.76
TDP1-206ENST00000553569 BLIDQ8IZY5 108 aa26.04■■□□□ 1.76
TDP1-206ENST00000553569 GPRASP2Q96D09 838 aa26.04■■□□□ 1.76
TDP1-206ENST00000553569 POLR3EQ9NVU0 708 aa26.04■■□□□ 1.76
TDP1-206ENST00000553569 PKD2L1Q9P0L9 805 aa26.04■■□□□ 1.76
TDP1-206ENST00000553569 NR2E3Q9Y5X4 410 aa26.04■■□□□ 1.76
TDP1-206ENST00000553569 A6NJR5 290 aa26.03■■□□□ 1.76
TDP1-206ENST00000553569 ZNF76P36508 570 aa26.03■■□□□ 1.76
TDP1-206ENST00000553569 FAM177A1Q8N128 213 aaPredicted RBP26.03■■□□□ 1.76
TDP1-206ENST00000553569 DAGLBQ8NCG7 672 aa26.03■■□□□ 1.76
TDP1-206ENST00000553569 EMID1Q96A84 441 aaPredicted RBP26.03■■□□□ 1.76
TDP1-206ENST00000553569 SPATA33Q96N06 139 aa26.03■■□□□ 1.76
TDP1-206ENST00000553569 MXRA8Q9BRK3 442 aa26.03■■□□□ 1.76
TDP1-206ENST00000553569 PHF20Q9BVI0 1012 aa26.03■■□□□ 1.76
TDP1-206ENST00000553569 MLXIPQ9HAP2 919 aa26.03■■□□□ 1.76
TDP1-206ENST00000553569 JADE2Q9NQC1 790 aa26.03■■□□□ 1.76
TDP1-206ENST00000553569 ELP1O95163 1332 aa26.03■■□□□ 1.76
TDP1-206ENST00000553569 A0A0U1RQG5 324 aaPredicted RBP26.02■■□□□ 1.76
TDP1-206ENST00000553569 CABYRO75952 493 aa26.02■■□□□ 1.76
TDP1-206ENST00000553569 PSMC6P62333 389 aa26.02■■□□□ 1.76
TDP1-206ENST00000553569 PURAQ00577 322 aaKnown RBP26.02■■□□□ 1.76
TDP1-206ENST00000553569 NPY5RQ15761 445 aa26.02■■□□□ 1.76
TDP1-206ENST00000553569 MYSM1Q5VVJ2 828 aa26.02■■□□□ 1.76
TDP1-206ENST00000553569 CYP2W1Q8TAV3 490 aa26.02■■□□□ 1.76
TDP1-206ENST00000553569 CDHR1Q96JP9 859 aa26.02■■□□□ 1.76
TDP1-206ENST00000553569 BCAS3Q9H6U6 928 aa26.02■■□□□ 1.76
TDP1-206ENST00000553569 H0YGN5 161 aa26.01■■□□□ 1.75
TDP1-206ENST00000553569 PQBP1O60828 265 aaKnown RBP26.01■■□□□ 1.75
TDP1-206ENST00000553569 NEDD9Q14511 834 aa26.01■■□□□ 1.75
TDP1-206ENST00000553569 CEP55Q53EZ4 464 aa26.01■■□□□ 1.75
TDP1-206ENST00000553569 GALNT17Q6IS24 598 aa26.01■■□□□ 1.75
TDP1-206ENST00000553569 CYFIP1Q7L576 1253 aa26.01■■□□□ 1.75
TDP1-206ENST00000553569 IL27Q8NEV9 243 aa26.01■■□□□ 1.75
TDP1-206ENST00000553569 PPTC7Q8NI37 304 aa26.01■■□□□ 1.75
TDP1-206ENST00000553569 LLPHQ9BRT6 129 aaKnown RBP26.01■■□□□ 1.75
TDP1-206ENST00000553569 MTG1Q9BT17 334 aaPredicted RBP26.01■■□□□ 1.75
TDP1-206ENST00000553569 ZMYND8Q9ULU4 1186 aaPredicted RBP26.01■■□□□ 1.75
TDP1-206ENST00000553569 SP4Q02446 784 aa26■■□□□ 1.75
TDP1-206ENST00000553569 C1orf53Q5VUE5 145 aa26■■□□□ 1.75
TDP1-206ENST00000553569 KPNA6O60684 536 aa25.99■■□□□ 1.75
TDP1-206ENST00000553569 ATP9AO75110 1047 aa25.99■■□□□ 1.75
TDP1-206ENST00000553569 KCNA2P16389 499 aa25.99■■□□□ 1.75
TDP1-206ENST00000553569 SYN1P17600 705 aa25.99■■□□□ 1.75
TDP1-206ENST00000553569 CHMP4BP1P59074 171 aa25.99■■□□□ 1.75
TDP1-206ENST00000553569 ITGA7Q13683 1181 aa25.99■■□□□ 1.75
TDP1-206ENST00000553569 DGKDQ16760 1214 aa25.99■■□□□ 1.75
TDP1-206ENST00000553569 HSDL1Q3SXM5 330 aa25.99■■□□□ 1.75
TDP1-206ENST00000553569 METTL7BQ6UX53 244 aa25.99■■□□□ 1.75
TDP1-206ENST00000553569 CRYGNQ8WXF5 182 aa25.99■■□□□ 1.75
TDP1-206ENST00000553569 TMX3Q96JJ7 454 aa25.99■■□□□ 1.75
TDP1-206ENST00000553569 PCDH10Q9P2E7 1040 aa25.99■■□□□ 1.75
TDP1-206ENST00000553569 SCN10AQ9Y5Y9 1956 aa25.98■■□□□ 1.75
TDP1-206ENST00000553569 FAM86B1E9PN63 330 aa25.98■■□□□ 1.75
TDP1-206ENST00000553569 M0R2N6 131 aa25.98■■□□□ 1.75
TDP1-206ENST00000553569 ARVCFO00192 962 aa25.98■■□□□ 1.75
TDP1-206ENST00000553569 NOP56O00567 594 aaKnown RBP25.98■■□□□ 1.75
TDP1-206ENST00000553569 CYP3A4P08684 503 aa25.98■■□□□ 1.75
TDP1-206ENST00000553569 FAM86B2P0C5J1 330 aa25.98■■□□□ 1.75
TDP1-206ENST00000553569 ZNF286BP0CG31 522 aa25.98■■□□□ 1.75
TDP1-206ENST00000553569 ARP10275 920 aa25.98■■□□□ 1.75
TDP1-206ENST00000553569 MCM2P49736 904 aa25.98■■□□□ 1.75
TDP1-206ENST00000553569 TLE2Q04725 743 aa25.98■■□□□ 1.75
TDP1-206ENST00000553569 TRIM29Q14134 588 aa25.98■■□□□ 1.75
TDP1-206ENST00000553569 PRPF38BQ5VTL8 546 aaKnown RBP25.98■■□□□ 1.75
TDP1-206ENST00000553569 OXER1Q8TDS5 423 aa25.98■■□□□ 1.75
TDP1-206ENST00000553569 TBCKQ8TEA7 893 aa25.98■■□□□ 1.75
TDP1-206ENST00000553569 SENP7Q9BQF6 1050 aa25.98■■□□□ 1.75
TDP1-206ENST00000553569 PRDM5Q9NQX1 630 aaPredicted RBP25.98■■□□□ 1.75
TDP1-206ENST00000553569 KCNH7Q9NS40 1196 aa25.98■■□□□ 1.75
TDP1-206ENST00000553569 HMGN5P82970 282 aaKnown RBP25.97■■□□□ 1.75
TDP1-206ENST00000553569 KRT25Q7Z3Z0 450 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms