RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 BAIAP3O94812 1187 aa14.72□□□□□ -0.05
LINC00643-202ENST00000553426 F2P00734 622 aa14.72□□□□□ -0.05
LINC00643-202ENST00000553426 CALM1P0DP23 149 aa14.72□□□□□ -0.05
LINC00643-202ENST00000553426 CALM2P0DP24 149 aa14.72□□□□□ -0.05
LINC00643-202ENST00000553426 CALM3P0DP25 149 aa14.72□□□□□ -0.05
LINC00643-202ENST00000553426 SELPP16109 830 aa14.72□□□□□ -0.05
LINC00643-202ENST00000553426 IGFBP4P22692 258 aa14.72□□□□□ -0.05
LINC00643-202ENST00000553426 KCNJ6P48051 423 aa14.72□□□□□ -0.05
LINC00643-202ENST00000553426 RABGGTBP53611 331 aa14.72□□□□□ -0.05
LINC00643-202ENST00000553426 RNF20Q5VTR2 975 aa14.72□□□□□ -0.05
LINC00643-202ENST00000553426 PHOSPHO2Q8TCD6 241 aa14.72□□□□□ -0.05
LINC00643-202ENST00000553426 SYMPKQ92797 1274 aaKnown RBP14.72□□□□□ -0.05
LINC00643-202ENST00000553426 LY9Q9HBG7 655 aa14.72□□□□□ -0.05
LINC00643-202ENST00000553426 HDAC6Q9UBN7 1215 aa14.72□□□□□ -0.05
LINC00643-202ENST00000553426 YBX2Q9Y2T7 364 aaKnown RBP14.72□□□□□ -0.05
LINC00643-202ENST00000553426 RGS20O76081 388 aa14.71□□□□□ -0.05
LINC00643-202ENST00000553426 ZNF286BP0CG31 522 aa14.71□□□□□ -0.05
LINC00643-202ENST00000553426 UBA1P22314 1058 aaKnown RBP14.71□□□□□ -0.05
LINC00643-202ENST00000553426 NEDD9Q14511 834 aa14.71□□□□□ -0.05
LINC00643-202ENST00000553426 SLC35G1Q2M3R5 365 aa14.71□□□□□ -0.05
LINC00643-202ENST00000553426 IL31RAQ8NI17 732 aa14.71□□□□□ -0.05
LINC00643-202ENST00000553426 PPM1EQ8WY54 764 aa14.71□□□□□ -0.05
LINC00643-202ENST00000553426 ESYT1Q9BSJ8 1104 aa14.71□□□□□ -0.05
LINC00643-202ENST00000553426 LSG1Q9H089 658 aaKnown RBP14.71□□□□□ -0.05
LINC00643-202ENST00000553426 ANO2Q9NQ90 1003 aa14.71□□□□□ -0.05
LINC00643-202ENST00000553426 RAPGEFL1Q9UHV5 662 aa14.71□□□□□ -0.05
LINC00643-202ENST00000553426 SLC12A7Q9Y666 1083 aa14.71□□□□□ -0.05
LINC00643-202ENST00000553426 CHD9Q3L8U1 2897 aa14.7□□□□□ -0.06
LINC00643-202ENST00000553426 SLC27A2O14975 620 aa14.7□□□□□ -0.06
LINC00643-202ENST00000553426 SORBS3O60504 671 aa14.7□□□□□ -0.06
LINC00643-202ENST00000553426 HOXD8P13378 290 aaPredicted RBP14.7□□□□□ -0.06
LINC00643-202ENST00000553426 LIFRP42702 1097 aa14.7□□□□□ -0.06
LINC00643-202ENST00000553426 PTK7Q13308 1070 aa14.7□□□□□ -0.06
LINC00643-202ENST00000553426 HSDL1Q3SXM5 330 aa14.7□□□□□ -0.06
LINC00643-202ENST00000553426 XRRA1Q6P2D8 792 aa14.7□□□□□ -0.06
LINC00643-202ENST00000553426 SYNE3Q6ZMZ3 975 aa14.7□□□□□ -0.06
LINC00643-202ENST00000553426 LRRC8DQ7L1W4 858 aa14.7□□□□□ -0.06
LINC00643-202ENST00000553426 VWCEQ96DN2 955 aa14.7□□□□□ -0.06
LINC00643-202ENST00000553426 MYL10Q9BUA6 226 aa14.7□□□□□ -0.06
LINC00643-202ENST00000553426 TSPYL2Q9H2G4 693 aaPredicted RBP14.7□□□□□ -0.06
LINC00643-202ENST00000553426 BAZ2BQ9UIF8 2168 aaKnown RBP14.7□□□□□ -0.06
LINC00643-202ENST00000553426 HAS3O00219 553 aa14.69□□□□□ -0.06
LINC00643-202ENST00000553426 SH2B2O14492 632 aaPredicted RBP14.69□□□□□ -0.06
LINC00643-202ENST00000553426 FIBPO43427 364 aa14.69□□□□□ -0.06
LINC00643-202ENST00000553426 CKBP12277 381 aa14.69□□□□□ -0.06
LINC00643-202ENST00000553426 MYOGP15173 224 aa14.69□□□□□ -0.06
LINC00643-202ENST00000553426 SP2Q02086 613 aa14.69□□□□□ -0.06
LINC00643-202ENST00000553426 RBL2Q08999 1139 aa14.69□□□□□ -0.06
LINC00643-202ENST00000553426 BMP2KLQ5H9B9 411 aa14.69□□□□□ -0.06
LINC00643-202ENST00000553426 CREB3L3Q68CJ9 461 aa14.69□□□□□ -0.06
LINC00643-202ENST00000553426 CENPQQ7L2Z9 268 aaPredicted RBP14.69□□□□□ -0.06
LINC00643-202ENST00000553426 NLRX1Q86UT6 975 aa14.69□□□□□ -0.06
LINC00643-202ENST00000553426 USP38Q8NB14 1042 aa14.69□□□□□ -0.06
LINC00643-202ENST00000553426 ZFP91Q96JP5 570 aaPredicted RBP14.69□□□□□ -0.06
LINC00643-202ENST00000553426 USP26Q9BXU7 913 aa14.69□□□□□ -0.06
LINC00643-202ENST00000553426 MYO9BQ13459 2157 aa14.68□□□□□ -0.06
LINC00643-202ENST00000553426 H3BRB1 525 aa14.68□□□□□ -0.06
LINC00643-202ENST00000553426 PIK3CDO00329 1044 aa14.68□□□□□ -0.06
LINC00643-202ENST00000553426 EFCAB14O75071 495 aa14.68□□□□□ -0.06
LINC00643-202ENST00000553426 CA3P07451 260 aa14.68□□□□□ -0.06
LINC00643-202ENST00000553426 COL9A1P20849 921 aa14.68□□□□□ -0.06
LINC00643-202ENST00000553426 ICAM3P32942 547 aa14.68□□□□□ -0.06
LINC00643-202ENST00000553426 NECTIN1Q15223 517 aa14.68□□□□□ -0.06
LINC00643-202ENST00000553426 PCNX4Q63HM2 1172 aa14.68□□□□□ -0.06
LINC00643-202ENST00000553426 CNKSR3Q6P9H4 555 aa14.68□□□□□ -0.06
LINC00643-202ENST00000553426 USP17L6PQ6QN14 398 aa14.68□□□□□ -0.06
LINC00643-202ENST00000553426 METTL7BQ6UX53 244 aa14.68□□□□□ -0.06
LINC00643-202ENST00000553426 HERC6Q8IVU3 1022 aa14.68□□□□□ -0.06
LINC00643-202ENST00000553426 GIMAP8Q8ND71 665 aaPredicted RBP14.68□□□□□ -0.06
LINC00643-202ENST00000553426 INPP4AQ96PE3 977 aaPredicted RBP14.68□□□□□ -0.06
LINC00643-202ENST00000553426 ZBED2Q9BTP6 218 aa14.68□□□□□ -0.06
LINC00643-202ENST00000553426 TUT1Q9H6E5 874 aaKnown RBP14.68□□□□□ -0.06
LINC00643-202ENST00000553426 PSTPIP2Q9H939 334 aa14.68□□□□□ -0.06
LINC00643-202ENST00000553426 RTEL1Q9NZ71 1219 aa14.68□□□□□ -0.06
LINC00643-202ENST00000553426 FRMPD4Q14CM0 1322 aa14.67□□□□□ -0.06
LINC00643-202ENST00000553426 EMSYQ7Z589 1322 aa14.67□□□□□ -0.06
LINC00643-202ENST00000553426 ABHD14A-ACY1A0A1B0GW23 586 aa14.67□□□□□ -0.06
LINC00643-202ENST00000553426 C17orf102A2RUQ5 167 aa14.67□□□□□ -0.06
LINC00643-202ENST00000553426 SPATA31C2B4DYI2 1134 aa14.67□□□□□ -0.06
LINC00643-202ENST00000553426 GTPBP6O43824 516 aaPredicted RBP14.67□□□□□ -0.06
LINC00643-202ENST00000553426 TLL1O43897 1013 aa14.67□□□□□ -0.06
LINC00643-202ENST00000553426 GNAT1P11488 350 aa14.67□□□□□ -0.06
LINC00643-202ENST00000553426 MRPS9P82933 396 aaKnown RBP14.67□□□□□ -0.06
LINC00643-202ENST00000553426 IKBKEQ14164 716 aa14.67□□□□□ -0.06
LINC00643-202ENST00000553426 CCDC85BQ15834 202 aaPredicted RBP14.67□□□□□ -0.06
LINC00643-202ENST00000553426 TJAP1Q5JTD0 557 aa14.67□□□□□ -0.06
LINC00643-202ENST00000553426 CYFIP1Q7L576 1253 aa14.67□□□□□ -0.06
LINC00643-202ENST00000553426 FANCBQ8NB91 859 aa14.67□□□□□ -0.06
LINC00643-202ENST00000553426 DHX38Q92620 1227 aaKnown RBP14.67□□□□□ -0.06
LINC00643-202ENST00000553426 GPKOWQ92917 476 aaPredicted RBP eCLIP14.67□□□□□ -0.06
LINC00643-202ENST00000553426 ATP6V0A1Q93050 837 aa14.67□□□□□ -0.06
LINC00643-202ENST00000553426 CDHR1Q96JP9 859 aa14.67□□□□□ -0.06
LINC00643-202ENST00000553426 CTAGE1Q96RT6 745 aa14.67□□□□□ -0.06
LINC00643-202ENST00000553426 SENP7Q9BQF6 1050 aa14.67□□□□□ -0.06
LINC00643-202ENST00000553426 C16orf70Q9BSU1 422 aa14.67□□□□□ -0.06
LINC00643-202ENST00000553426 ZNF215Q9UL58 517 aaPredicted RBP14.67□□□□□ -0.06
LINC00643-202ENST00000553426 MYH7BA7E2Y1 1941 aa14.66□□□□□ -0.06
LINC00643-202ENST00000553426 SCN5AQ14524 2016 aa14.66□□□□□ -0.06
LINC00643-202ENST00000553426 TANC1Q9C0D5 1861 aa14.66□□□□□ -0.06
LINC00643-202ENST00000553426 SPDYE3A6NKU9 549 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms