RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 MYCLP12524 364 aaPredicted RBP11.07□□□□□ -0.64
TMEM260-204ENST00000553335 CYP2B6P20813 491 aa11.07□□□□□ -0.64
TMEM260-204ENST00000553335 PRMT2P55345 433 aa11.07□□□□□ -0.64
TMEM260-204ENST00000553335 UBXN2AP68543 259 aa11.07□□□□□ -0.64
TMEM260-204ENST00000553335 ARHGAP4P98171 946 aa11.07□□□□□ -0.64
TMEM260-204ENST00000553335 STXBP2Q15833 593 aa11.07□□□□□ -0.64
TMEM260-204ENST00000553335 AMHR2Q16671 573 aa11.07□□□□□ -0.64
TMEM260-204ENST00000553335 LETM2Q2VYF4 491 aa11.07□□□□□ -0.64
TMEM260-204ENST00000553335 EARS2Q5JPH6 523 aaKnown RBP11.07□□□□□ -0.64
TMEM260-204ENST00000553335 PCNX4Q63HM2 1172 aa11.07□□□□□ -0.64
TMEM260-204ENST00000553335 TRMT44Q8IYL2 757 aaKnown RBP11.07□□□□□ -0.64
TMEM260-204ENST00000553335 MSL3Q8N5Y2 521 aaKnown RBP11.07□□□□□ -0.64
TMEM260-204ENST00000553335 SP7Q8TDD2 431 aaPredicted RBP11.07□□□□□ -0.64
TMEM260-204ENST00000553335 USP6NLQ92738 828 aa11.07□□□□□ -0.64
TMEM260-204ENST00000553335 PURBQ96QR8 312 aaKnown RBP11.07□□□□□ -0.64
TMEM260-204ENST00000553335 ARHGAP39Q9C0H5 1083 aa11.07□□□□□ -0.64
TMEM260-204ENST00000553335 GJD2Q9UKL4 321 aa11.07□□□□□ -0.64
TMEM260-204ENST00000553335 FAM205CA6NFA0 338 aa11.06□□□□□ -0.64
TMEM260-204ENST00000553335 CCNT1O60563 726 aaKnown RBP11.06□□□□□ -0.64
TMEM260-204ENST00000553335 GCFC2P16383 781 aaKnown RBP11.06□□□□□ -0.64
TMEM260-204ENST00000553335 ATP2B1P20020 1258 aa11.06□□□□□ -0.64
TMEM260-204ENST00000553335 FLT3LGP49771 235 aa11.06□□□□□ -0.64
TMEM260-204ENST00000553335 ORC2Q13416 577 aaPredicted RBP11.06□□□□□ -0.64
TMEM260-204ENST00000553335 TTC38Q5R3I4 469 aa11.06□□□□□ -0.64
TMEM260-204ENST00000553335 ATL3Q6DD88 541 aa11.06□□□□□ -0.64
TMEM260-204ENST00000553335 MOXD1Q6UVY6 613 aa11.06□□□□□ -0.64
TMEM260-204ENST00000553335 NLRX1Q86UT6 975 aa11.06□□□□□ -0.64
TMEM260-204ENST00000553335 VSIG10LQ86VR7 867 aa11.06□□□□□ -0.64
TMEM260-204ENST00000553335 NPLOC4Q8TAT6 608 aa11.06□□□□□ -0.64
TMEM260-204ENST00000553335 CRYGNQ8WXF5 182 aa11.06□□□□□ -0.64
TMEM260-204ENST00000553335 MAML3Q96JK9 1138 aa11.06□□□□□ -0.64
TMEM260-204ENST00000553335 APBA2Q99767 749 aa11.06□□□□□ -0.64
TMEM260-204ENST00000553335 SRRDQ9UH36 339 aa11.06□□□□□ -0.64
TMEM260-204ENST00000553335 CFAP45Q9UL16 551 aa11.06□□□□□ -0.64
TMEM260-204ENST00000553335 CEP131Q9UPN4 1083 aa11.06□□□□□ -0.64
TMEM260-204ENST00000553335 EIF3JO75822 258 aaKnown RBP11.05□□□□□ -0.64
TMEM260-204ENST00000553335 XRCC5P13010 732 aaKnown RBP11.05□□□□□ -0.64
TMEM260-204ENST00000553335 EDNRBP24530 442 aa11.05□□□□□ -0.64
TMEM260-204ENST00000553335 CIITAP33076 1130 aa11.05□□□□□ -0.64
TMEM260-204ENST00000553335 PRKCZQ05513 592 aa11.05□□□□□ -0.64
TMEM260-204ENST00000553335 IRF5Q13568 498 aa11.05□□□□□ -0.64
TMEM260-204ENST00000553335 GNPTABQ3T906 1256 aa11.05□□□□□ -0.64
TMEM260-204ENST00000553335 OLFML2BQ68BL8 750 aa11.05□□□□□ -0.64
TMEM260-204ENST00000553335 PPP4R3AQ6IN85 833 aa11.05□□□□□ -0.64
TMEM260-204ENST00000553335 MAMDC4Q6UXC1 1216 aa11.05□□□□□ -0.64
TMEM260-204ENST00000553335 FGD4Q96M96 766 aa11.05□□□□□ -0.64
TMEM260-204ENST00000553335 MXRA8Q9BRK3 442 aa11.05□□□□□ -0.64
TMEM260-204ENST00000553335 TINF2Q9BSI4 451 aa11.05□□□□□ -0.64
TMEM260-204ENST00000553335 GABRQQ9UN88 632 aa11.05□□□□□ -0.64
TMEM260-204ENST00000553335 TRIM17Q9Y577 477 aa11.05□□□□□ -0.64
TMEM260-204ENST00000553335 PCDHGA4Q9Y5G9 962 aa11.05□□□□□ -0.64
TMEM260-204ENST00000553335 SYNGAP1Q96PV0 1343 aa11.05□□□□□ -0.64
TMEM260-204ENST00000553335 CYP3A7-CYP3A51PA0A087WV96 503 aa11.04□□□□□ -0.64
TMEM260-204ENST00000553335 MAFGO15525 162 aa11.04□□□□□ -0.64
TMEM260-204ENST00000553335 MARCH6O60337 910 aa11.04□□□□□ -0.64
TMEM260-204ENST00000553335 BMP15O95972 392 aa11.04□□□□□ -0.64
TMEM260-204ENST00000553335 CYP3A7P24462 503 aa11.04□□□□□ -0.64
TMEM260-204ENST00000553335 TOB1P50616 345 aaPredicted RBP11.04□□□□□ -0.64
TMEM260-204ENST00000553335 KRT85P78386 507 aa11.04□□□□□ -0.64
TMEM260-204ENST00000553335 MRPS9P82933 396 aaKnown RBP11.04□□□□□ -0.64
TMEM260-204ENST00000553335 SETQ01105 290 aaPredicted RBP11.04□□□□□ -0.64
TMEM260-204ENST00000553335 ZNF174Q15697 407 aa11.04□□□□□ -0.64
TMEM260-204ENST00000553335 FOXD4L6Q3SYB3 417 aaPredicted RBP11.04□□□□□ -0.64
TMEM260-204ENST00000553335 Q4G0T1 1027 aa11.04□□□□□ -0.64
TMEM260-204ENST00000553335 CEP55Q53EZ4 464 aa11.04□□□□□ -0.64
TMEM260-204ENST00000553335 FAM173BQ6P4H8 233 aa11.04□□□□□ -0.64
TMEM260-204ENST00000553335 FOXD4L3Q6VB84 417 aaPredicted RBP11.04□□□□□ -0.64
TMEM260-204ENST00000553335 ARMCX2Q7L311 632 aa11.04□□□□□ -0.64
TMEM260-204ENST00000553335 NIPA1Q7RTP0 329 aa11.04□□□□□ -0.64
TMEM260-204ENST00000553335 IL31RAQ8NI17 732 aa11.04□□□□□ -0.64
TMEM260-204ENST00000553335 RAET1EQ8TD07 263 aa11.04□□□□□ -0.64
TMEM260-204ENST00000553335 MORC4Q8TE76 937 aa11.04□□□□□ -0.64
TMEM260-204ENST00000553335 CDHR1Q96JP9 859 aa11.04□□□□□ -0.64
TMEM260-204ENST00000553335 ABHD16BQ9H3Z7 469 aa11.04□□□□□ -0.64
TMEM260-204ENST00000553335 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.04□□□□□ -0.64
TMEM260-204ENST00000553335 RTEL1Q9NZ71 1219 aa11.04□□□□□ -0.64
TMEM260-204ENST00000553335 DDX25Q9UHL0 483 aaKnown RBP11.04□□□□□ -0.64
TMEM260-204ENST00000553335 UBIAD1Q9Y5Z9 338 aa11.04□□□□□ -0.64
TMEM260-204ENST00000553335 ASTN1O14525 1302 aa11.04□□□□□ -0.64
TMEM260-204ENST00000553335 LAD1O00515 517 aa11.03□□□□□ -0.64
TMEM260-204ENST00000553335 BAG4O95429 457 aaKnown RBP11.03□□□□□ -0.64
TMEM260-204ENST00000553335 TDP2O95551 362 aa11.03□□□□□ -0.64
TMEM260-204ENST00000553335 NCLP19338 710 aaKnown RBP11.03□□□□□ -0.64
TMEM260-204ENST00000553335 MCM7P33993 719 aa11.03□□□□□ -0.64
TMEM260-204ENST00000553335 DNM1Q05193 864 aaKnown RBP11.03□□□□□ -0.64
TMEM260-204ENST00000553335 SF3A1Q15459 793 aaKnown RBP11.03□□□□□ -0.64
TMEM260-204ENST00000553335 MFSD14CQ5VZR4 134 aa11.03□□□□□ -0.64
TMEM260-204ENST00000553335 ANO1Q5XXA6 986 aa11.03□□□□□ -0.64
TMEM260-204ENST00000553335 KCNV1Q6PIU1 500 aa11.03□□□□□ -0.64
TMEM260-204ENST00000553335 OTOP1Q7RTM1 612 aa11.03□□□□□ -0.64
TMEM260-204ENST00000553335 PLA2G4DQ86XP0 818 aa11.03□□□□□ -0.64
TMEM260-204ENST00000553335 PXYLP1Q8TE99 480 aa11.03□□□□□ -0.64
TMEM260-204ENST00000553335 TNPO1Q92973 898 aaKnown RBP11.03□□□□□ -0.64
TMEM260-204ENST00000553335 GPRASP2Q96D09 838 aa11.03□□□□□ -0.64
TMEM260-204ENST00000553335 MBOAT7Q96N66 472 aa11.03□□□□□ -0.64
TMEM260-204ENST00000553335 VTA1Q9NP79 307 aa11.03□□□□□ -0.64
TMEM260-204ENST00000553335 JADE2Q9NQC1 790 aa11.03□□□□□ -0.64
TMEM260-204ENST00000553335 POLR3EQ9NVU0 708 aa11.03□□□□□ -0.64
TMEM260-204ENST00000553335 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.03□□□□□ -0.64
TMEM260-204ENST00000553335 CNPY2Q9Y2B0 182 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms