RNA–Protein interactions for RNA: ENST00000552573.6

TGFBR1-210, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 4

Gene TGFBR1, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-210ENST00000552573 NBPF4Q96M43 638 aa3.22□□□□□ -1.89
TGFBR1-210ENST00000552573 SPATA25Q9BR10 227 aa3.22□□□□□ -1.89
TGFBR1-210ENST00000552573 C11orf84Q9BUA3 381 aaPredicted RBP3.22□□□□□ -1.89
TGFBR1-210ENST00000552573 SPATA9Q9BWV2 254 aa3.22□□□□□ -1.89
TGFBR1-210ENST00000552573 TRIM55Q9BYV6 548 aa3.22□□□□□ -1.89
TGFBR1-210ENST00000552573 CLDND1Q9NY35 253 aa3.22□□□□□ -1.89
TGFBR1-210ENST00000552573 TRAV20A0A0B4J274 112 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 HGSO14964 777 aaPredicted RBP3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 SASH1O94885 1247 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 LRG1P02750 347 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 C6orf222P0C671 652 aaPredicted RBP3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 CYP2C8P10632 490 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 ATP2B1P20020 1258 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 THBS2P35442 1172 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 KCNC1P48547 511 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 ITGA1P56199 1179 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 ADAM9Q13443 819 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 SMAD4Q13485 552 aaKnown RBP3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 RASA3Q14644 834 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 STEAP3Q658P3 488 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 CD300LDQ6UXZ3 194 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 LBX2Q6XYB7 198 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 ZDHHC14Q8IZN3 488 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 CARFQ8N187 725 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 LRRC47Q8N1G4 583 aaKnown RBP3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 DCAF4Q8WV16 495 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 ZBTB8AQ96BR9 441 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 ARMC5Q96C12 935 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 CHAMP1Q96JM3 812 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 JAM3Q9BX67 310 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 ADAM7Q9H2U9 754 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 EPB41L1Q9H4G0 881 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 SIRPGQ9P1W8 387 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 COA3Q9Y2R0 106 aaPredicted RBP3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 PCDHB4Q9Y5E5 795 aa3.21□□□□□ -1.9
TGFBR1-210ENST00000552573 NCANO14594 1321 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 FAM221BA6H8Z2 402 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 PRICKLE3O43900 615 aaPredicted RBP3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 NOBOXO60393 691 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 FOXD2O60548 495 aaPredicted RBP3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 FAM153BP0C7A2 387 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 GTF2F1P35269 517 aaKnown RBP eCLIP3.2□□□□□ -1.96e-9■■■□□ 15
TGFBR1-210ENST00000552573 GPR85P60893 370 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 IFRD2Q12894 506 aaPredicted RBP3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 NFIXQ14938 502 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 RTP5Q14D33 572 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 CHRNA2Q15822 529 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 FAM209AQ5JX71 171 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 TEPPQ6URK8 271 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 OTOP3Q7RTS5 596 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 FRMD5Q7Z6J6 570 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 STK32CQ86UX6 486 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 ZNF761Q86XN6 746 aaPredicted RBP3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 PROSER1Q86XN7 944 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 ZBTB38Q8NAP3 1195 aaPredicted RBP3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 KYQ8NBH2 561 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 CXorf38Q8TB03 319 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 PIP4K2CQ8TBX8 421 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 CLEC4DQ8WXI8 215 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 RELTQ969Z4 430 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 EXOC2Q96KP1 924 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 TEPSINQ96N21 525 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 ZFYVE21Q9BQ24 234 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 KRTAP9-3Q9BYQ3 159 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 PDGFDQ9GZP0 370 aaPredicted RBP3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 SMOC1Q9H4F8 434 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 PCDH18Q9HCL0 1135 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 SLC6A20Q9NP91 592 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 DTLQ9NZJ0 730 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 HSPBP1Q9NZL4 362 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 MYOTQ9UBF9 498 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 ASH2LQ9UBL3 628 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 PFDN2Q9UHV9 154 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 TELO2Q9Y4R8 837 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 DUSP10Q9Y6W6 482 aa3.2□□□□□ -1.9
TGFBR1-210ENST00000552573 B8ZZF3 427 aa3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 PRRG2O14669 202 aa3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 SLC27A2O14975 620 aa3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 NKRFO15226 690 aaKnown RBP eCLIP3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 DGKIO75912 1065 aa3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 GRK2P25098 689 aa3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 RPL13P26373 211 aaKnown RBP3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 GRK3P35626 688 aa3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 BUD31P41223 144 aaPredicted RBP3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 SARSP49591 514 aaKnown RBP3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 KRTAP10-2P60368 255 aa3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 SSRP1Q08945 709 aaKnown RBP3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 KIZQ2M2Z5 673 aa3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 MTERF2Q49AM1 385 aa3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 ZFYVE27Q5T4F4 411 aa3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 NT5DC1Q5TFE4 455 aa3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 CYP4F22Q6NT55 531 aa3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 LRP10Q7Z4F1 713 aa3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 SCUBE1Q8IWY4 988 aa3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 RBM12BQ8IXT5 1001 aaKnown RBP3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 JMYQ8N9B5 988 aa3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 TTLL11Q8NHH1 800 aa3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 UHMK1Q8TAS1 419 aaKnown RBP3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.19□□□□□ -1.9
TGFBR1-210ENST00000552573 PHOSPHO1Q8TCT1 267 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms