RNA–Protein interactions for RNA: ENST00000552433.1

LETMD1-233, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-233ENST00000552433 FRS2Q8WU20 508 aa7.97□□□□□ -1.13
LETMD1-233ENST00000552433 BTN2A2Q8WVV5 523 aa7.97□□□□□ -1.13
LETMD1-233ENST00000552433 DDX11Q96FC9 970 aa7.97□□□□□ -1.13
LETMD1-233ENST00000552433 NKX2-4Q9H2Z4 354 aa7.97□□□□□ -1.13
LETMD1-233ENST00000552433 CAPN10Q9HC96 672 aa7.97□□□□□ -1.13
LETMD1-233ENST00000552433 NUB1Q9Y5A7 615 aa7.97□□□□□ -1.13
LETMD1-233ENST00000552433 PRICKLE3O43900 615 aaPredicted RBP7.96□□□□□ -1.14
LETMD1-233ENST00000552433 ETFBP38117 255 aa7.96□□□□□ -1.14
LETMD1-233ENST00000552433 DLX2Q07687 328 aaPredicted RBP7.96□□□□□ -1.14
LETMD1-233ENST00000552433 SV2CQ496J9 727 aa7.96□□□□□ -1.14
LETMD1-233ENST00000552433 NT5DC1Q5TFE4 455 aa7.96□□□□□ -1.14
LETMD1-233ENST00000552433 FAM178BQ8IXR5 827 aa7.96□□□□□ -1.14
LETMD1-233ENST00000552433 ANP32BQ92688 251 aaKnown RBP7.96□□□□□ -1.14
LETMD1-233ENST00000552433 KRTAP4-11Q9BYQ6 195 aa7.96□□□□□ -1.14
LETMD1-233ENST00000552433 ACTR10Q9NZ32 417 aa7.96□□□□□ -1.14
LETMD1-233ENST00000552433 KLHL42Q9P2K6 505 aa7.96□□□□□ -1.14
LETMD1-233ENST00000552433 LRP2BPQ9P2M1 347 aa7.96□□□□□ -1.14
LETMD1-233ENST00000552433 TMEFF2Q9UIK5 374 aaPredicted RBP7.96□□□□□ -1.14
LETMD1-233ENST00000552433 C22orf46C9J442 243 aa7.95□□□□□ -1.14
LETMD1-233ENST00000552433 ARNTLO00327 626 aa7.95□□□□□ -1.14
LETMD1-233ENST00000552433 ZBTB7AO95365 584 aa7.95□□□□□ -1.14
LETMD1-233ENST00000552433 ITGAVP06756 1048 aa7.95□□□□□ -1.14
LETMD1-233ENST00000552433 NAT2P11245 290 aa7.95□□□□□ -1.14
LETMD1-233ENST00000552433 ECI1P42126 302 aa7.95□□□□□ -1.14
LETMD1-233ENST00000552433 ZNF143P52747 638 aaPredicted RBP7.95□□□□□ -1.14
LETMD1-233ENST00000552433 CACNB2Q08289 660 aaPredicted RBP7.95□□□□□ -1.14
LETMD1-233ENST00000552433 SMAD4Q13485 552 aaKnown RBP7.95□□□□□ -1.14
LETMD1-233ENST00000552433 NAALADL2Q58DX5 795 aa7.95□□□□□ -1.14
LETMD1-233ENST00000552433 LCE5AQ5TCM9 118 aa7.95□□□□□ -1.14
LETMD1-233ENST00000552433 DPH6Q7L8W6 267 aa7.95□□□□□ -1.14
LETMD1-233ENST00000552433 FRMD5Q7Z6J6 570 aa7.95□□□□□ -1.14
LETMD1-233ENST00000552433 VPS37DQ86XT2 251 aa7.95□□□□□ -1.14
LETMD1-233ENST00000552433 EVI5LQ96CN4 794 aa7.95□□□□□ -1.14
LETMD1-233ENST00000552433 KRTAP9-3Q9BYQ3 159 aa7.95□□□□□ -1.14
LETMD1-233ENST00000552433 hCG_2014768A0A024R1R8 64 aa7.94□□□□□ -1.14
LETMD1-233ENST00000552433 DDAH1O94760 285 aa7.94□□□□□ -1.14
LETMD1-233ENST00000552433 CELA3BP08861 270 aa7.94□□□□□ -1.14
LETMD1-233ENST00000552433 SF1Q15637 639 aaKnown RBP7.94□□□□□ -1.14
LETMD1-233ENST00000552433 FERMT3Q86UX7 667 aa7.94□□□□□ -1.14
LETMD1-233ENST00000552433 CCAR1Q8IX12 1150 aaKnown RBP7.94□□□□□ -1.14
LETMD1-233ENST00000552433 FAM26EQ8N5C1 309 aa7.94□□□□□ -1.14
LETMD1-233ENST00000552433 NPLOC4Q8TAT6 608 aa7.94□□□□□ -1.14
LETMD1-233ENST00000552433 CPA5Q8WXQ8 436 aa7.94□□□□□ -1.14
LETMD1-233ENST00000552433 ZBTB8AQ96BR9 441 aa7.94□□□□□ -1.14
LETMD1-233ENST00000552433 TEPSINQ96N21 525 aa7.94□□□□□ -1.14
LETMD1-233ENST00000552433 SPATA6Q9NWH7 488 aaPredicted RBP7.94□□□□□ -1.14
LETMD1-233ENST00000552433 SH3D21A4FU49 640 aa7.93□□□□□ -1.14
LETMD1-233ENST00000552433 U2SURPO15042 1029 aaKnown RBP7.93□□□□□ -1.14
LETMD1-233ENST00000552433 SGSM2O43147 1006 aa7.93□□□□□ -1.14
LETMD1-233ENST00000552433 HSP90AA1P07900 732 aaKnown RBP7.93□□□□□ -1.14
LETMD1-233ENST00000552433 FPR2P25090 351 aa7.93□□□□□ -1.14
LETMD1-233ENST00000552433 RTP5Q14D33 572 aa7.93□□□□□ -1.14
LETMD1-233ENST00000552433 PRSS53Q2L4Q9 553 aa7.93□□□□□ -1.14
LETMD1-233ENST00000552433 CCDC96Q2M329 555 aa7.93□□□□□ -1.14
LETMD1-233ENST00000552433 CEP68Q76N32 757 aa7.93□□□□□ -1.14
LETMD1-233ENST00000552433 STK32CQ86UX6 486 aa7.93□□□□□ -1.14
LETMD1-233ENST00000552433 CCDC103Q8IW40 242 aa7.93□□□□□ -1.14
LETMD1-233ENST00000552433 CARFQ8N187 725 aa7.93□□□□□ -1.14
LETMD1-233ENST00000552433 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.93□□□□□ -1.14
LETMD1-233ENST00000552433 DDX1Q92499 740 aaKnown RBP7.93□□□□□ -1.14
LETMD1-233ENST00000552433 SENP7Q9BQF6 1050 aa7.93□□□□□ -1.14
LETMD1-233ENST00000552433 USP40Q9NVE5 1235 aa7.93□□□□□ -1.14
LETMD1-233ENST00000552433 PNMA2Q9UL42 364 aa7.93□□□□□ -1.14
LETMD1-233ENST00000552433 THOC2Q8NI27 1593 aaKnown RBP7.93□□□□□ -1.14
LETMD1-233ENST00000552433 GOLIM4O00461 696 aa7.92□□□□□ -1.14
LETMD1-233ENST00000552433 PARNO95453 639 aaKnown RBP7.92□□□□□ -1.14
LETMD1-233ENST00000552433 C8BP07358 591 aa7.92□□□□□ -1.14
LETMD1-233ENST00000552433 SNRPB2P08579 225 aaKnown RBP7.92□□□□□ -1.14
LETMD1-233ENST00000552433 PAX3P23760 479 aa7.92□□□□□ -1.14
LETMD1-233ENST00000552433 C4orf46Q504U0 113 aa7.92□□□□□ -1.14
LETMD1-233ENST00000552433 AMOTL1Q8IY63 956 aa7.92□□□□□ -1.14
LETMD1-233ENST00000552433 PMM1Q92871 262 aa7.92□□□□□ -1.14
LETMD1-233ENST00000552433 MKL1Q969V6 931 aa7.92□□□□□ -1.14
LETMD1-233ENST00000552433 TSPAN18Q96SJ8 248 aa7.92□□□□□ -1.14
LETMD1-233ENST00000552433 TIMM13Q9Y5L4 95 aaPredicted RBP7.92□□□□□ -1.14
LETMD1-233ENST00000552433 SBNO2Q9Y2G9 1366 aa7.92□□□□□ -1.14
LETMD1-233ENST00000552433 SUSD5O60279 629 aa7.91□□□□□ -1.14
LETMD1-233ENST00000552433 IBSPP21815 317 aaPredicted RBP7.91□□□□□ -1.14
LETMD1-233ENST00000552433 COPB2P35606 906 aa7.91□□□□□ -1.14
LETMD1-233ENST00000552433 BCL6P41182 706 aa7.91□□□□□ -1.14
LETMD1-233ENST00000552433 KCNJ6P48051 423 aa7.91□□□□□ -1.14
LETMD1-233ENST00000552433 PLP2Q04941 152 aa7.91□□□□□ -1.14
LETMD1-233ENST00000552433 PTPROQ16827 1216 aa7.91□□□□□ -1.14
LETMD1-233ENST00000552433 MRM1Q6IN84 353 aaKnown RBP7.91□□□□□ -1.14
LETMD1-233ENST00000552433 CD300LDQ6UXZ3 194 aa7.91□□□□□ -1.14
LETMD1-233ENST00000552433 PRRT2Q7Z6L0 340 aaPredicted RBP7.91□□□□□ -1.14
LETMD1-233ENST00000552433 ZNF227Q86WZ6 799 aa7.91□□□□□ -1.14
LETMD1-233ENST00000552433 DIO2Q92813 273 aa7.91□□□□□ -1.14
LETMD1-233ENST00000552433 GORASP1Q9BQQ3 440 aa7.91□□□□□ -1.14
LETMD1-233ENST00000552433 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.91□□□□□ -1.14
LETMD1-233ENST00000552433 BDH2Q9BUT1 245 aa7.91□□□□□ -1.14
LETMD1-233ENST00000552433 BRINP2Q9C0B6 783 aa7.91□□□□□ -1.14
LETMD1-233ENST00000552433 FEZ2Q9UHY8 353 aaPredicted RBP7.91□□□□□ -1.14
LETMD1-233ENST00000552433 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.91□□□□□ -1.14
LETMD1-233ENST00000552433 HOXC12P31275 282 aa7.9□□□□□ -1.14
LETMD1-233ENST00000552433 SARSP49591 514 aaKnown RBP7.9□□□□□ -1.14
LETMD1-233ENST00000552433 RPL11P62913 178 aaKnown RBP7.9□□□□□ -1.14
LETMD1-233ENST00000552433 TNNI3KQ59H18 835 aa7.9□□□□□ -1.14
LETMD1-233ENST00000552433 UBXN11Q5T124 520 aa7.9□□□□□ -1.14
LETMD1-233ENST00000552433 IQCEQ6IPM2 695 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms