RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 PPTC7Q8NI37 304 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.54□□□□□ -0.4
TMEM116-215ENST00000552374 NOC4LQ9BVI4 516 aaKnown RBP12.54□□□□□ -0.4
TMEM116-215ENST00000552374 CNTNAP5Q8WYK1 1306 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 CCDC196A0A1B0GTZ2 297 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 SPATA31C2B4DYI2 1134 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 ZNF286BP0CG31 522 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 UBA1P22314 1058 aaKnown RBP12.54□□□□□ -0.4
TMEM116-215ENST00000552374 PTGISQ16647 500 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 TMEM240Q5SV17 173 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 PCNX4Q63HM2 1172 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 ZNF365Q70YC5 407 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 CYFIP1Q7L576 1253 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 C7orf31Q8N865 590 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 KAT2BQ92831 832 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 SCLYQ96I15 445 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 FAM161BQ96MY7 647 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 IL23AQ9NPF7 189 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 PCDHA6Q9UN73 950 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 PCDHA8Q9Y5H6 950 aa12.54□□□□□ -0.4
TMEM116-215ENST00000552374 SMCO2A6NFE2 343 aa12.53□□□□□ -0.4
TMEM116-215ENST00000552374 NOP56O00567 594 aaKnown RBP12.53□□□□□ -0.4
TMEM116-215ENST00000552374 FIBPO43427 364 aa12.53□□□□□ -0.4
TMEM116-215ENST00000552374 PPFIA3O75145 1194 aa12.53□□□□□ -0.4
TMEM116-215ENST00000552374 FGBP02675 491 aa12.53□□□□□ -0.4
TMEM116-215ENST00000552374 ICAM3P32942 547 aa12.53□□□□□ -0.4
TMEM116-215ENST00000552374 PSEN2P49810 448 aa12.53□□□□□ -0.4
TMEM116-215ENST00000552374 PTPN11Q06124 597 aaPredicted RBP12.53□□□□□ -0.4
TMEM116-215ENST00000552374 NEDD9Q14511 834 aa12.53□□□□□ -0.4
TMEM116-215ENST00000552374 MFSD10Q14728 455 aa12.53□□□□□ -0.4
TMEM116-215ENST00000552374 KIAA0753Q2KHM9 967 aa12.53□□□□□ -0.4
TMEM116-215ENST00000552374 XRRA1Q6P2D8 792 aa12.53□□□□□ -0.4
TMEM116-215ENST00000552374 RUFY3Q7L099 469 aa12.53□□□□□ -0.4
TMEM116-215ENST00000552374 NLRX1Q86UT6 975 aa12.53□□□□□ -0.4
TMEM116-215ENST00000552374 RETREG2Q8NC44 543 aa12.53□□□□□ -0.4
TMEM116-215ENST00000552374 INPP4AQ96PE3 977 aaPredicted RBP12.53□□□□□ -0.4
TMEM116-215ENST00000552374 LARP6Q9BRS8 491 aaKnown RBP12.53□□□□□ -0.4
TMEM116-215ENST00000552374 KATNAL1Q9BW62 490 aa12.53□□□□□ -0.4
TMEM116-215ENST00000552374 WNT8AQ9H1J5 351 aa12.53□□□□□ -0.4
TMEM116-215ENST00000552374 ZSWIM6Q9HCJ5 1215 aa12.53□□□□□ -0.4
TMEM116-215ENST00000552374 HDAC6Q9UBN7 1215 aa12.53□□□□□ -0.4
TMEM116-215ENST00000552374 CYP46A1Q9Y6A2 500 aa12.53□□□□□ -0.4
TMEM116-215ENST00000552374 FRMPD4Q14CM0 1322 aa12.52□□□□□ -0.41
TMEM116-215ENST00000552374 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.52□□□□□ -0.41
TMEM116-215ENST00000552374 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.52□□□□□ -0.41
TMEM116-215ENST00000552374 STXBP3O00186 592 aa12.52□□□□□ -0.41
TMEM116-215ENST00000552374 EPB41L2O43491 1005 aaKnown RBP12.52□□□□□ -0.41
TMEM116-215ENST00000552374 ADCY7P51828 1080 aa12.52□□□□□ -0.41
TMEM116-215ENST00000552374 RCAN1P53805 252 aa12.52□□□□□ -0.41
TMEM116-215ENST00000552374 CCT2P78371 535 aaKnown RBP12.52□□□□□ -0.41
TMEM116-215ENST00000552374 AKAP17AQ02040 695 aaKnown RBP12.52□□□□□ -0.41
TMEM116-215ENST00000552374 SP4Q02446 784 aa12.52□□□□□ -0.41
TMEM116-215ENST00000552374 SEMA3FQ13275 785 aa12.52□□□□□ -0.41
TMEM116-215ENST00000552374 GDF6Q6KF10 455 aaPredicted RBP12.52□□□□□ -0.41
TMEM116-215ENST00000552374 TYW1BQ6NUM6 668 aa12.52□□□□□ -0.41
TMEM116-215ENST00000552374 OTOP2Q7RTS6 562 aa12.52□□□□□ -0.41
TMEM116-215ENST00000552374 DEFB128Q7Z7B8 93 aa12.52□□□□□ -0.41
TMEM116-215ENST00000552374 RPUSD2Q8IZ73 545 aaKnown RBP12.52□□□□□ -0.41
TMEM116-215ENST00000552374 RIC8AQ9NPQ8 531 aa12.52□□□□□ -0.41
TMEM116-215ENST00000552374 BARHL2Q9NY43 387 aa12.52□□□□□ -0.41
TMEM116-215ENST00000552374 PDIA3P30101 505 aaKnown RBP12.51□□□□□ -0.41
TMEM116-215ENST00000552374 SMAD3P84022 425 aaKnown RBP12.51□□□□□ -0.41
TMEM116-215ENST00000552374 BFSP2Q13515 415 aa12.51□□□□□ -0.41
TMEM116-215ENST00000552374 UTP14CQ5TAP6 766 aaKnown RBP12.51□□□□□ -0.41
TMEM116-215ENST00000552374 PSRC1Q6PGN9 363 aaPredicted RBP12.51□□□□□ -0.41
TMEM116-215ENST00000552374 FBXL16Q8N461 479 aa12.51□□□□□ -0.41
TMEM116-215ENST00000552374 PHKBQ93100 1093 aa12.51□□□□□ -0.41
TMEM116-215ENST00000552374 PGBD1Q96JS3 809 aa12.51□□□□□ -0.41
TMEM116-215ENST00000552374 UPF3BQ9BZI7 483 aaKnown RBP12.51□□□□□ -0.41
TMEM116-215ENST00000552374 EHMT1Q9H9B1 1298 aa12.51□□□□□ -0.41
TMEM116-215ENST00000552374 PKD2L1Q9P0L9 805 aa12.51□□□□□ -0.41
TMEM116-215ENST00000552374 GRXCR1A8MXD5 290 aa12.5□□□□□ -0.41
TMEM116-215ENST00000552374 H3BRB1 525 aa12.5□□□□□ -0.41
TMEM116-215ENST00000552374 ATP9AO75110 1047 aa12.5□□□□□ -0.41
TMEM116-215ENST00000552374 F2P00734 622 aa12.5□□□□□ -0.41
TMEM116-215ENST00000552374 ITGB5P18084 799 aa12.5□□□□□ -0.41
TMEM116-215ENST00000552374 ZNF200P98182 395 aaPredicted RBP12.5□□□□□ -0.41
TMEM116-215ENST00000552374 PFKFB3Q16875 520 aaPredicted RBP12.5□□□□□ -0.41
TMEM116-215ENST00000552374 ZNF697Q5TEC3 545 aa12.5□□□□□ -0.41
TMEM116-215ENST00000552374 FAM109BQ6ICB4 259 aaPredicted RBP12.5□□□□□ -0.41
TMEM116-215ENST00000552374 METTL7BQ6UX53 244 aa12.5□□□□□ -0.41
TMEM116-215ENST00000552374 SENP7Q9BQF6 1050 aa12.5□□□□□ -0.41
TMEM116-215ENST00000552374 C16orf70Q9BSU1 422 aa12.5□□□□□ -0.41
TMEM116-215ENST00000552374 SLC26A6Q9BXS9 759 aa12.5□□□□□ -0.41
TMEM116-215ENST00000552374 AGXT2Q9BYV1 514 aa12.5□□□□□ -0.41
TMEM116-215ENST00000552374 FTOQ9C0B1 505 aaKnown RBP eCLIP12.5□□□□□ -0.41
TMEM116-215ENST00000552374 TUT1Q9H6E5 874 aaKnown RBP12.5□□□□□ -0.41
TMEM116-215ENST00000552374 NCOA5Q9HCD5 579 aaKnown RBP12.5□□□□□ -0.41
TMEM116-215ENST00000552374 PDRG1Q9NUG6 133 aa12.5□□□□□ -0.41
TMEM116-215ENST00000552374 TMEM260Q9NX78 707 aa12.5□□□□□ -0.41
TMEM116-215ENST00000552374 MTMR10Q9NXD2 777 aa12.5□□□□□ -0.41
TMEM116-215ENST00000552374 GTF2IRD1Q9UHL9 959 aa12.5□□□□□ -0.41
TMEM116-215ENST00000552374 TELO2Q9Y4R8 837 aa12.5□□□□□ -0.41
TMEM116-215ENST00000552374 LRRC37A2A6NM11 1700 aa12.5□□□□□ -0.41
TMEM116-215ENST00000552374 MYH6P13533 1939 aa12.49□□□□□ -0.41
TMEM116-215ENST00000552374 HAS3O00219 553 aa12.49□□□□□ -0.41
TMEM116-215ENST00000552374 PRPF3O43395 683 aaKnown RBP12.49□□□□□ -0.41
TMEM116-215ENST00000552374 FOSP01100 380 aaPredicted RBP12.49□□□□□ -0.41
TMEM116-215ENST00000552374 LGALS2P05162 132 aa12.49□□□□□ -0.41
TMEM116-215ENST00000552374 IQCF3P0C7M6 154 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms