RNA–Protein interactions for RNA: ENST00000550962.5

CEP290-205, Transcript of centrosomal protein 290, humanhuman

TSL 3

Gene CEP290, Length 697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-205ENST00000550962 SPATA33Q96N06 139 aa15.27■□□□□ 0.04
CEP290-205ENST00000550962 RNF26Q9BY78 433 aaPredicted RBP15.27■□□□□ 0.04
CEP290-205ENST00000550962 TBX21Q9UL17 535 aa15.27■□□□□ 0.04
CEP290-205ENST00000550962 NOD1Q9Y239 953 aa15.27■□□□□ 0.04
CEP290-205ENST00000550962 KIAA1217Q5T5P2 1943 aa15.26■□□□□ 0.03
CEP290-205ENST00000550962 SMCO2A6NFE2 343 aa15.26■□□□□ 0.03
CEP290-205ENST00000550962 MAFGO15525 162 aa15.26■□□□□ 0.03
CEP290-205ENST00000550962 PRPF3O43395 683 aaKnown RBP15.26■□□□□ 0.03
CEP290-205ENST00000550962 CDKL5O76039 1030 aa15.26■□□□□ 0.03
CEP290-205ENST00000550962 UBA1P22314 1058 aaKnown RBP15.26■□□□□ 0.03
CEP290-205ENST00000550962 PTGS1P23219 599 aa15.26■□□□□ 0.03
CEP290-205ENST00000550962 GNA11P29992 359 aa15.26■□□□□ 0.03
CEP290-205ENST00000550962 PDIA3P30101 505 aaKnown RBP15.26■□□□□ 0.03
CEP290-205ENST00000550962 PSMC6P62333 389 aa15.26■□□□□ 0.03
CEP290-205ENST00000550962 FUT2Q10981 343 aa15.26■□□□□ 0.03
CEP290-205ENST00000550962 PPIGQ13427 754 aaKnown RBP eCLIP15.26■□□□□ 0.03
CEP290-205ENST00000550962 SH3RF1Q7Z6J0 888 aa15.26■□□□□ 0.03
CEP290-205ENST00000550962 BICD2Q8TD16 824 aa15.26■□□□□ 0.03
CEP290-205ENST00000550962 GPRASP2Q96D09 838 aa15.26■□□□□ 0.03
CEP290-205ENST00000550962 UPF3BQ9BZI7 483 aaKnown RBP15.26■□□□□ 0.03
CEP290-205ENST00000550962 ALDH8A1Q9H2A2 487 aaPredicted RBP15.26■□□□□ 0.03
CEP290-205ENST00000550962 C6orf50Q9HD87 102 aa15.26■□□□□ 0.03
CEP290-205ENST00000550962 FAM217BQ9NTX9 383 aaPredicted RBP15.26■□□□□ 0.03
CEP290-205ENST00000550962 PCDHA6Q9UN73 950 aa15.26■□□□□ 0.03
CEP290-205ENST00000550962 PCDHA8Q9Y5H6 950 aa15.26■□□□□ 0.03
CEP290-205ENST00000550962 STXBP3O00186 592 aa15.25■□□□□ 0.03
CEP290-205ENST00000550962 PPFIA4O75335 1185 aa15.25■□□□□ 0.03
CEP290-205ENST00000550962 CD4P01730 458 aa15.25■□□□□ 0.03
CEP290-205ENST00000550962 IFNAR1P17181 557 aa15.25■□□□□ 0.03
CEP290-205ENST00000550962 FXR1P51114 621 aaKnown RBP eCLIP15.25■□□□□ 0.03
CEP290-205ENST00000550962 UBE2SQ16763 222 aa15.25■□□□□ 0.03
CEP290-205ENST00000550962 NBPF20Q3BBV1 942 aa15.25■□□□□ 0.03
CEP290-205ENST00000550962 LRIT3Q3SXY7 679 aa15.25■□□□□ 0.03
CEP290-205ENST00000550962 MYSM1Q5VVJ2 828 aa15.25■□□□□ 0.03
CEP290-205ENST00000550962 MFSD5Q6N075 450 aa15.25■□□□□ 0.03
CEP290-205ENST00000550962 CCDC155Q8N6L0 562 aa15.25■□□□□ 0.03
CEP290-205ENST00000550962 SENP7Q9BQF6 1050 aa15.25■□□□□ 0.03
CEP290-205ENST00000550962 HIPK3Q9H422 1215 aa15.25■□□□□ 0.03
CEP290-205ENST00000550962 RTEL1Q9NZ71 1219 aa15.25■□□□□ 0.03
CEP290-205ENST00000550962 ESYT2A0FGR8 921 aa15.24■□□□□ 0.03
CEP290-205ENST00000550962 SPATA31C2B4DYI2 1134 aa15.24■□□□□ 0.03
CEP290-205ENST00000550962 B4GALT4O60513 344 aa15.24■□□□□ 0.03
CEP290-205ENST00000550962 RGS20O76081 388 aa15.24■□□□□ 0.03
CEP290-205ENST00000550962 CHMP4BP1P59074 171 aa15.24■□□□□ 0.03
CEP290-205ENST00000550962 CCT2P78371 535 aaKnown RBP15.24■□□□□ 0.03
CEP290-205ENST00000550962 MRPS9P82933 396 aaKnown RBP15.24■□□□□ 0.03
CEP290-205ENST00000550962 SSRP1Q08945 709 aaKnown RBP15.24■□□□□ 0.03
CEP290-205ENST00000550962 MTMR1Q13613 665 aa15.24■□□□□ 0.03
CEP290-205ENST00000550962 TOB2Q14106 344 aaPredicted RBP15.24■□□□□ 0.03
CEP290-205ENST00000550962 METTL7BQ6UX53 244 aa15.24■□□□□ 0.03
CEP290-205ENST00000550962 C7orf31Q8N865 590 aa15.24■□□□□ 0.03
CEP290-205ENST00000550962 SLC26A6Q9BXS9 759 aa15.24■□□□□ 0.03
CEP290-205ENST00000550962 MTIF3Q9H2K0 278 aaKnown RBP15.24■□□□□ 0.03
CEP290-205ENST00000550962 LTBP2Q14767 1821 aa15.24■□□□□ 0.03
CEP290-205ENST00000550962 PSRC1Q6PGN9 363 aaPredicted RBP15.23■□□□□ 0.03
CEP290-205ENST00000550962 SESTD1Q86VW0 696 aa15.23■□□□□ 0.03
CEP290-205ENST00000550962 FAM177A1Q8N128 213 aaPredicted RBP15.23■□□□□ 0.03
CEP290-205ENST00000550962 REXO1Q8N1G1 1221 aaKnown RBP15.23■□□□□ 0.03
CEP290-205ENST00000550962 ANO3Q9BYT9 981 aa15.23■□□□□ 0.03
CEP290-205ENST00000550962 PPP1R12CQ9BZL4 782 aa15.23■□□□□ 0.03
CEP290-205ENST00000550962 ZNF215Q9UL58 517 aaPredicted RBP15.23■□□□□ 0.03
CEP290-205ENST00000550962 GRIN2DO15399 1336 aa15.22■□□□□ 0.03
CEP290-205ENST00000550962 DEXIO95424 95 aa15.22■□□□□ 0.03
CEP290-205ENST00000550962 SLC34A2O95436 690 aa15.22■□□□□ 0.03
CEP290-205ENST00000550962 F2P00734 622 aa15.22■□□□□ 0.03
CEP290-205ENST00000550962 HOXD8P13378 290 aaPredicted RBP15.22■□□□□ 0.03
CEP290-205ENST00000550962 XBP1P17861 261 aa15.22■□□□□ 0.03
CEP290-205ENST00000550962 ZNF76P36508 570 aa15.22■□□□□ 0.03
CEP290-205ENST00000550962 PSEN2P49810 448 aa15.22■□□□□ 0.03
CEP290-205ENST00000550962 BFSP2Q13515 415 aa15.22■□□□□ 0.03
CEP290-205ENST00000550962 MFSD10Q14728 455 aa15.22■□□□□ 0.03
CEP290-205ENST00000550962 GPR153Q6NV75 609 aa15.22■□□□□ 0.03
CEP290-205ENST00000550962 RETREG2Q8NC44 543 aa15.22■□□□□ 0.03
CEP290-205ENST00000550962 PHKBQ93100 1093 aa15.22■□□□□ 0.03
CEP290-205ENST00000550962 ZMYND12Q9H0C1 365 aa15.22■□□□□ 0.03
CEP290-205ENST00000550962 TRPV6Q9H1D0 765 aa15.22■□□□□ 0.03
CEP290-205ENST00000550962 SLKQ9H2G2 1235 aaPredicted RBP15.22■□□□□ 0.03
CEP290-205ENST00000550962 SH3GLB2Q9NR46 395 aa15.22■□□□□ 0.03
CEP290-205ENST00000550962 SREBF1P36956 1147 aa15.21■□□□□ 0.03
CEP290-205ENST00000550962 KIAA0753Q2KHM9 967 aa15.21■□□□□ 0.03
CEP290-205ENST00000550962 HSDL1Q3SXM5 330 aa15.21■□□□□ 0.03
CEP290-205ENST00000550962 TYW1BQ6NUM6 668 aa15.21■□□□□ 0.03
CEP290-205ENST00000550962 CYFIP1Q7L576 1253 aa15.21■□□□□ 0.03
CEP290-205ENST00000550962 RPUSD2Q8IZ73 545 aaKnown RBP15.21■□□□□ 0.03
CEP290-205ENST00000550962 ZFP91Q96JP5 570 aaPredicted RBP15.21■□□□□ 0.03
CEP290-205ENST00000550962 RNPC3Q96LT9 517 aaKnown RBP15.21■□□□□ 0.03
CEP290-205ENST00000550962 SDF4Q9BRK5 362 aa15.21■□□□□ 0.03
CEP290-205ENST00000550962 C22orf23Q9BZE7 217 aa15.21■□□□□ 0.03
CEP290-205ENST00000550962 NCOA5Q9HCD5 579 aaKnown RBP15.21■□□□□ 0.03
CEP290-205ENST00000550962 JADE2Q9NQC1 790 aa15.21■□□□□ 0.03
CEP290-205ENST00000550962 TCEAL9Q9UHQ7 104 aa15.21■□□□□ 0.03
CEP290-205ENST00000550962 UBIAD1Q9Y5Z9 338 aa15.21■□□□□ 0.03
CEP290-205ENST00000550962 PITPNM1O00562 1244 aa15.2■□□□□ 0.02
CEP290-205ENST00000550962 SORBS3O60504 671 aa15.2■□□□□ 0.02
CEP290-205ENST00000550962 PFKMP08237 780 aa15.2■□□□□ 0.02
CEP290-205ENST00000550962 ZNF286BP0CG31 522 aa15.2■□□□□ 0.02
CEP290-205ENST00000550962 GNAT1P11488 350 aa15.2■□□□□ 0.02
CEP290-205ENST00000550962 RFC2P35250 354 aa15.2■□□□□ 0.02
CEP290-205ENST00000550962 NLRP5P59047 1200 aa15.2■□□□□ 0.02
CEP290-205ENST00000550962 SP2Q02086 613 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms