RNA–Protein interactions for RNA: ENST00000550831.7

TMEM116-213, Transcript of transmembrane protein 116, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM116, Length 1,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-213ENST00000550831 SFPQP23246 707 aaKnown RBP eCLIP10.29□□□□□ -0.76
TMEM116-213ENST00000550831 IKQ13123 557 aaPredicted RBP10.29□□□□□ -0.76
TMEM116-213ENST00000550831 PSMD2Q13200 908 aa10.29□□□□□ -0.76
TMEM116-213ENST00000550831 KIF4BQ2VIQ3 1234 aa10.29□□□□□ -0.76
TMEM116-213ENST00000550831 DCAF15Q66K64 600 aa10.29□□□□□ -0.76
TMEM116-213ENST00000550831 SPECC1LQ69YQ0 1117 aa10.29□□□□□ -0.76
TMEM116-213ENST00000550831 ARMCX5Q6P1M9 558 aa10.29□□□□□ -0.76
TMEM116-213ENST00000550831 UNC13DQ70J99 1090 aa10.29□□□□□ -0.76
TMEM116-213ENST00000550831 MIGA2Q7L4E1 593 aa10.29□□□□□ -0.76
TMEM116-213ENST00000550831 FILIP1Q7Z7B0 1213 aa10.29□□□□□ -0.76
TMEM116-213ENST00000550831 FCHSD1Q86WN1 690 aa10.29□□□□□ -0.76
TMEM116-213ENST00000550831 TRMT44Q8IYL2 757 aaKnown RBP10.29□□□□□ -0.76
TMEM116-213ENST00000550831 RASSF8Q8NHQ8 419 aa10.29□□□□□ -0.76
TMEM116-213ENST00000550831 STAMQ92783 540 aa10.29□□□□□ -0.76
TMEM116-213ENST00000550831 THAP9Q9H5L6 903 aa10.29□□□□□ -0.76
TMEM116-213ENST00000550831 EHMT1Q9H9B1 1298 aa10.29□□□□□ -0.76
TMEM116-213ENST00000550831 RBBP6Q7Z6E9 1792 aaKnown RBP10.28□□□□□ -0.76
TMEM116-213ENST00000550831 PHIPQ8WWQ0 1821 aa10.28□□□□□ -0.76
TMEM116-213ENST00000550831 BICDL2A1A5D9 508 aa10.28□□□□□ -0.76
TMEM116-213ENST00000550831 GCOM1H8Y6P7 765 aaPredicted RBP10.28□□□□□ -0.76
TMEM116-213ENST00000550831 PSMA7O14818 248 aa10.28□□□□□ -0.76
TMEM116-213ENST00000550831 NRDCO43847 1150 aa10.28□□□□□ -0.76
TMEM116-213ENST00000550831 RAD21O60216 631 aa10.28□□□□□ -0.76
TMEM116-213ENST00000550831 EGFRP00533 1210 aa10.28□□□□□ -0.76
TMEM116-213ENST00000550831 TUBB4AP04350 444 aa10.28□□□□□ -0.76
TMEM116-213ENST00000550831 ICAM1P05362 532 aa10.28□□□□□ -0.76
TMEM116-213ENST00000550831 POLR2MP0CAP2 368 aa10.28□□□□□ -0.76
TMEM116-213ENST00000550831 SKILP12757 684 aa10.28□□□□□ -0.76
TMEM116-213ENST00000550831 CCNE1P24864 410 aa10.28□□□□□ -0.76
TMEM116-213ENST00000550831 HSD17B4P51659 736 aa10.28□□□□□ -0.76
TMEM116-213ENST00000550831 USP14P54578 494 aa10.28□□□□□ -0.76
TMEM116-213ENST00000550831 TTI2Q6NXR4 508 aa10.28□□□□□ -0.76
TMEM116-213ENST00000550831 SPICE1Q8N0Z3 855 aa10.28□□□□□ -0.76
TMEM116-213ENST00000550831 GPC2Q8N158 579 aa10.28□□□□□ -0.76
TMEM116-213ENST00000550831 PRPF38AQ8NAV1 312 aaKnown RBP10.28□□□□□ -0.76
TMEM116-213ENST00000550831 SNX29Q8TEQ0 813 aa10.28□□□□□ -0.76
TMEM116-213ENST00000550831 NELFBQ8WX92 580 aa10.28□□□□□ -0.76
TMEM116-213ENST00000550831 CDK5RAP3Q96JB5 506 aa10.28□□□□□ -0.76
TMEM116-213ENST00000550831 C12orf42Q96LP6 360 aa10.28□□□□□ -0.76
TMEM116-213ENST00000550831 ZNF341Q9BYN7 854 aa10.28□□□□□ -0.76
TMEM116-213ENST00000550831 HACL1Q9UJ83 578 aa10.28□□□□□ -0.76
TMEM116-213ENST00000550831 PITPNM2Q9BZ72 1349 aa10.28□□□□□ -0.76
TMEM116-213ENST00000550831 IGLV3-22A0A075B6J6 115 aa10.27□□□□□ -0.77
TMEM116-213ENST00000550831 FRMD3A2A2Y4 597 aa10.27□□□□□ -0.77
TMEM116-213ENST00000550831 POTEMA6NI47 508 aa10.27□□□□□ -0.77
TMEM116-213ENST00000550831 MYMKA6NI61 221 aa10.27□□□□□ -0.77
TMEM116-213ENST00000550831 FECHP22830 423 aa10.27□□□□□ -0.77
TMEM116-213ENST00000550831 EEF1GP26641 437 aaKnown RBP10.27□□□□□ -0.77
TMEM116-213ENST00000550831 RPA1P27694 616 aa10.27□□□□□ -0.77
TMEM116-213ENST00000550831 USH1GQ495M9 461 aa10.27□□□□□ -0.77
TMEM116-213ENST00000550831 FILIP1LQ4L180 1135 aa10.27□□□□□ -0.77
TMEM116-213ENST00000550831 NOL9Q5SY16 702 aaKnown RBP10.27□□□□□ -0.77
TMEM116-213ENST00000550831 HAUS3Q68CZ6 603 aa10.27□□□□□ -0.77
TMEM116-213ENST00000550831 CENPPQ6IPU0 288 aa10.27□□□□□ -0.77
TMEM116-213ENST00000550831 NIPA1Q7RTP0 329 aa10.27□□□□□ -0.77
TMEM116-213ENST00000550831 SMYD4Q8IYR2 804 aaPredicted RBP10.27□□□□□ -0.77
TMEM116-213ENST00000550831 GUF1Q8N442 669 aaKnown RBP10.27□□□□□ -0.77
TMEM116-213ENST00000550831 PRIMPOLQ96LW4 560 aa10.27□□□□□ -0.77
TMEM116-213ENST00000550831 NUDT12Q9BQG2 462 aa10.27□□□□□ -0.77
TMEM116-213ENST00000550831 POLR3CQ9BUI4 534 aaPredicted RBP10.27□□□□□ -0.77
TMEM116-213ENST00000550831 PRDM10Q9NQV6 1147 aa10.27□□□□□ -0.77
TMEM116-213ENST00000550831 EXOC1Q9NV70 894 aa10.27□□□□□ -0.77
TMEM116-213ENST00000550831 CTNND2Q9UQB3 1225 aa10.27□□□□□ -0.77
TMEM116-213ENST00000550831 GDAQ9Y2T3 454 aa10.27□□□□□ -0.77
TMEM116-213ENST00000550831 ZNF536O15090 1300 aa10.27□□□□□ -0.77
TMEM116-213ENST00000550831 FRMPD4Q14CM0 1322 aa10.27□□□□□ -0.77
TMEM116-213ENST00000550831 RPTORQ8N122 1335 aa10.27□□□□□ -0.77
TMEM116-213ENST00000550831 SCN4AP35499 1836 aa10.27□□□□□ -0.77
TMEM116-213ENST00000550831 SMCHD1A6NHR9 2005 aa10.27□□□□□ -0.77
TMEM116-213ENST00000550831 RLFQ13129 1914 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 PAPPA2Q9BXP8 1791 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 ZNF541Q9H0D2 1346 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 FAM86B1E9PN63 330 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 FAM86B2P0C5J1 330 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 BCRP11274 1271 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 ASIC1P78348 528 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 PDE4DQ08499 809 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 ARID5BQ14865 1188 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 TCP11X2Q5H9J9 407 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 KLHL10Q6JEL2 608 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 SAMD7Q7Z3H4 446 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 LDHDQ86WU2 507 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 IRF2BP1Q8IU81 584 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 SCYL3Q8IZE3 742 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 ANKRD20A12PQ8NF67 263 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 ERMNQ8TAM6 284 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 DNAJC19Q96DA6 116 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 SLF1Q9BQI6 1058 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 GLIS2Q9BZE0 524 aaPredicted RBP10.26□□□□□ -0.77
TMEM116-213ENST00000550831 AS3MTQ9HBK9 375 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 SLC38A10Q9HBR0 1119 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 GPRC5DQ9NZD1 345 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 VAV3Q9UKW4 847 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 LOXHD1Q8IVV2 1947 aa10.26□□□□□ -0.77
TMEM116-213ENST00000550831 A0A1W2PQC6 194 aa10.25□□□□□ -0.77
TMEM116-213ENST00000550831 KIF2AO00139 706 aaPredicted RBP10.25□□□□□ -0.77
TMEM116-213ENST00000550831 MSH4O15457 936 aa10.25□□□□□ -0.77
TMEM116-213ENST00000550831 CCP110O43303 1012 aa10.25□□□□□ -0.77
TMEM116-213ENST00000550831 MARCH6O60337 910 aa10.25□□□□□ -0.77
TMEM116-213ENST00000550831 STX10O60499 249 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms