RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 SCFD2Q8WU76 684 aa14.85□□□□□ -0.03
RAB5C-206ENST00000550406 FAM184BQ9ULE4 1060 aa14.85□□□□□ -0.03
RAB5C-206ENST00000550406 GNEQ9Y223 722 aaKnown RBP14.85□□□□□ -0.03
RAB5C-206ENST00000550406 ZDHHC9Q9Y397 364 aa14.85□□□□□ -0.03
RAB5C-206ENST00000550406 AKR1A1P14550 325 aa14.84□□□□□ -0.03
RAB5C-206ENST00000550406 TNFAIP2Q03169 654 aa14.84□□□□□ -0.03
RAB5C-206ENST00000550406 LETM2Q2VYF4 491 aa14.84□□□□□ -0.03
RAB5C-206ENST00000550406 DUSP28Q4G0W2 176 aa14.84□□□□□ -0.03
RAB5C-206ENST00000550406 NIPA1Q7RTP0 329 aa14.84□□□□□ -0.03
RAB5C-206ENST00000550406 NEK8Q86SG6 692 aa14.84□□□□□ -0.03
RAB5C-206ENST00000550406 GPRASP2Q96D09 838 aa14.84□□□□□ -0.03
RAB5C-206ENST00000550406 UIMC1Q96RL1 719 aa14.84□□□□□ -0.03
RAB5C-206ENST00000550406 RNF208Q9H0X6 261 aa14.84□□□□□ -0.03
RAB5C-206ENST00000550406 KCNH7Q9NS40 1196 aa14.84□□□□□ -0.03
RAB5C-206ENST00000550406 DDX20Q9UHI6 824 aaKnown RBP14.84□□□□□ -0.03
RAB5C-206ENST00000550406 TELO2Q9Y4R8 837 aa14.84□□□□□ -0.03
RAB5C-206ENST00000550406 CTAGE5O15320 804 aa14.83□□□□□ -0.04
RAB5C-206ENST00000550406 SLC37A4O43826 429 aa14.83□□□□□ -0.04
RAB5C-206ENST00000550406 TXNP10599 105 aaKnown RBP14.83□□□□□ -0.04
RAB5C-206ENST00000550406 KCNA2P16389 499 aa14.83□□□□□ -0.04
RAB5C-206ENST00000550406 ZNF76P36508 570 aa14.83□□□□□ -0.04
RAB5C-206ENST00000550406 NBR1Q14596 966 aa14.83□□□□□ -0.04
RAB5C-206ENST00000550406 TTLL4Q14679 1199 aa14.83□□□□□ -0.04
RAB5C-206ENST00000550406 Q4G0T1 1027 aa14.83□□□□□ -0.04
RAB5C-206ENST00000550406 MOXD1Q6UVY6 613 aa14.83□□□□□ -0.04
RAB5C-206ENST00000550406 NLRX1Q86UT6 975 aa14.83□□□□□ -0.04
RAB5C-206ENST00000550406 PLA2G4DQ86XP0 818 aa14.83□□□□□ -0.04
RAB5C-206ENST00000550406 ABHD8Q96I13 439 aa14.83□□□□□ -0.04
RAB5C-206ENST00000550406 AGO4Q9HCK5 861 aaKnown RBP14.83□□□□□ -0.04
RAB5C-206ENST00000550406 MRVI1Q9Y6F6 885 aa14.83□□□□□ -0.04
RAB5C-206ENST00000550406 TCHHQ07283 1943 aa14.83□□□□□ -0.04
RAB5C-206ENST00000550406 FIBPO43427 364 aa14.82□□□□□ -0.04
RAB5C-206ENST00000550406 DUSP11O75319 330 aaKnown RBP14.82□□□□□ -0.04
RAB5C-206ENST00000550406 TGFB3P10600 412 aa14.82□□□□□ -0.04
RAB5C-206ENST00000550406 ATP2B1P20020 1258 aa14.82□□□□□ -0.04
RAB5C-206ENST00000550406 UBA1P22314 1058 aaKnown RBP14.82□□□□□ -0.04
RAB5C-206ENST00000550406 ARHGAP1Q07960 439 aa14.82□□□□□ -0.04
RAB5C-206ENST00000550406 ITGB3BPQ13352 177 aaPredicted RBP14.82□□□□□ -0.04
RAB5C-206ENST00000550406 MTMR1Q13613 665 aa14.82□□□□□ -0.04
RAB5C-206ENST00000550406 GNL2Q13823 731 aaKnown RBP14.82□□□□□ -0.04
RAB5C-206ENST00000550406 GNPTABQ3T906 1256 aa14.82□□□□□ -0.04
RAB5C-206ENST00000550406 PRR16Q569H4 304 aa14.82□□□□□ -0.04
RAB5C-206ENST00000550406 PPP4R3AQ6IN85 833 aa14.82□□□□□ -0.04
RAB5C-206ENST00000550406 FAM173BQ6P4H8 233 aa14.82□□□□□ -0.04
RAB5C-206ENST00000550406 GJA10Q969M2 543 aa14.82□□□□□ -0.04
RAB5C-206ENST00000550406 DEFB118Q96PH6 123 aa14.82□□□□□ -0.04
RAB5C-206ENST00000550406 MYADML2A6NDP7 307 aa14.81□□□□□ -0.04
RAB5C-206ENST00000550406 MSH4O15457 936 aa14.81□□□□□ -0.04
RAB5C-206ENST00000550406 MAFGO15525 162 aa14.81□□□□□ -0.04
RAB5C-206ENST00000550406 DHX15O43143 795 aaKnown RBP14.81□□□□□ -0.04
RAB5C-206ENST00000550406 DYNC1LI2O43237 492 aaPredicted RBP14.81□□□□□ -0.04
RAB5C-206ENST00000550406 SORBS3O60504 671 aa14.81□□□□□ -0.04
RAB5C-206ENST00000550406 CCNT1O60563 726 aaKnown RBP14.81□□□□□ -0.04
RAB5C-206ENST00000550406 ADAMTS4O75173 837 aa14.81□□□□□ -0.04
RAB5C-206ENST00000550406 SGPL1O95470 568 aa14.81□□□□□ -0.04
RAB5C-206ENST00000550406 BRD1O95696 1058 aa14.81□□□□□ -0.04
RAB5C-206ENST00000550406 GJB1P08034 283 aa14.81□□□□□ -0.04
RAB5C-206ENST00000550406 ZSCAN22P10073 491 aaPredicted RBP14.81□□□□□ -0.04
RAB5C-206ENST00000550406 ZNF174Q15697 407 aa14.81□□□□□ -0.04
RAB5C-206ENST00000550406 CELF3Q5SZQ8 465 aaKnown RBP14.81□□□□□ -0.04
RAB5C-206ENST00000550406 FOXD4L5Q5VV16 416 aaPredicted RBP14.81□□□□□ -0.04
RAB5C-206ENST00000550406 MYSM1Q5VVJ2 828 aa14.81□□□□□ -0.04
RAB5C-206ENST00000550406 KCNV1Q6PIU1 500 aa14.81□□□□□ -0.04
RAB5C-206ENST00000550406 C4orf32Q8N8J7 132 aa14.81□□□□□ -0.04
RAB5C-206ENST00000550406 ETNPPLQ8TBG4 499 aa14.81□□□□□ -0.04
RAB5C-206ENST00000550406 FOXD4L4Q8WXT5 416 aaPredicted RBP14.81□□□□□ -0.04
RAB5C-206ENST00000550406 SENP7Q9BQF6 1050 aa14.81□□□□□ -0.04
RAB5C-206ENST00000550406 CRISPLD2Q9H0B8 497 aa14.81□□□□□ -0.04
RAB5C-206ENST00000550406 UPF3AQ9H1J1 476 aaKnown RBP14.81□□□□□ -0.04
RAB5C-206ENST00000550406 PKD2L1Q9P0L9 805 aa14.81□□□□□ -0.04
RAB5C-206ENST00000550406 Q9Y3F1 56 aa14.81□□□□□ -0.04
RAB5C-206ENST00000550406 PCDHB6Q9Y5E3 794 aa14.81□□□□□ -0.04
RAB5C-206ENST00000550406 NKRFO15226 690 aaKnown RBP eCLIP14.8□□□□□ -0.04
RAB5C-206ENST00000550406 GGPS1O95749 300 aa14.8□□□□□ -0.04
RAB5C-206ENST00000550406 PGK1P00558 417 aa14.8□□□□□ -0.04
RAB5C-206ENST00000550406 RARBP10826 455 aa14.8□□□□□ -0.04
RAB5C-206ENST00000550406 TRAPPC10P48553 1259 aa14.8□□□□□ -0.04
RAB5C-206ENST00000550406 MNX1P50219 401 aaPredicted RBP14.8□□□□□ -0.04
RAB5C-206ENST00000550406 GJA9P57773 515 aa14.8□□□□□ -0.04
RAB5C-206ENST00000550406 NKX3-2P78367 333 aa14.8□□□□□ -0.04
RAB5C-206ENST00000550406 TTC38Q5R3I4 469 aa14.8□□□□□ -0.04
RAB5C-206ENST00000550406 BRAPQ7Z569 592 aa14.8□□□□□ -0.04
RAB5C-206ENST00000550406 POTEDQ86YR6 584 aa14.8□□□□□ -0.04
RAB5C-206ENST00000550406 KLHDC9Q8NEP7 349 aa14.8□□□□□ -0.04
RAB5C-206ENST00000550406 HAS1Q92839 578 aa14.8□□□□□ -0.04
RAB5C-206ENST00000550406 SLC5A5Q92911 643 aa14.8□□□□□ -0.04
RAB5C-206ENST00000550406 CDHR1Q96JP9 859 aa14.8□□□□□ -0.04
RAB5C-206ENST00000550406 TMEM60Q9H2L4 133 aa14.8□□□□□ -0.04
RAB5C-206ENST00000550406 KCNMB3Q9NPA1 279 aa14.8□□□□□ -0.04
RAB5C-206ENST00000550406 DDX25Q9UHL0 483 aaKnown RBP14.8□□□□□ -0.04
RAB5C-206ENST00000550406 OGDHLQ9ULD0 1010 aa14.8□□□□□ -0.04
RAB5C-206ENST00000550406 SYNRGQ9UMZ2 1314 aa14.8□□□□□ -0.04
RAB5C-206ENST00000550406 KIAA0100Q14667 2235 aaKnown RBP14.8□□□□□ -0.04
RAB5C-206ENST00000550406 IPO5O00410 1097 aaKnown RBP14.79□□□□□ -0.04
RAB5C-206ENST00000550406 MSCO60682 206 aa14.79□□□□□ -0.04
RAB5C-206ENST00000550406 NFASCO94856 1347 aa14.79□□□□□ -0.04
RAB5C-206ENST00000550406 F13A1P00488 732 aa14.79□□□□□ -0.04
RAB5C-206ENST00000550406 GH1P01241 217 aa14.79□□□□□ -0.04
RAB5C-206ENST00000550406 PDIA4P13667 645 aaKnown RBP14.79□□□□□ -0.04
RAB5C-206ENST00000550406 GCFC2P16383 781 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms