RNA–Protein interactions for RNA: ENST00000550379.1

RNF41-208, Transcript of ring finger protein 41, humanhuman

TSL 3

Gene RNF41, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-208ENST00000550379 PCDHA12Q9UN75 941 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 CNPY2Q9Y2B0 182 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 Q9Y3F1 56 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 LRRC37A2A6NM11 1700 aa8.7□□□□□ -1.02
RNF41-208ENST00000550379 GPR25O00155 361 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 IPO5O00410 1097 aaKnown RBP8.69□□□□□ -1.02
RNF41-208ENST00000550379 NKRFO15226 690 aaKnown RBP eCLIP8.69□□□□□ -1.02
RNF41-208ENST00000550379 MSH4O15457 936 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 SLC37A4O43826 429 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 AOC2O75106 756 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 ATG7O95352 703 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 LYPLA2O95372 231 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 TDP2O95551 362 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 XRCC6P12956 609 aaKnown RBP eCLIP8.69□□□□□ -1.02
RNF41-208ENST00000550379 HOXD8P13378 290 aaPredicted RBP8.69□□□□□ -1.02
RNF41-208ENST00000550379 CAPN2P17655 700 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 MCM7P33993 719 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 RGS2P41220 211 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 CNTN2Q02246 1040 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 ZNF174Q15697 407 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 CALCRLQ16602 461 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 KLHL40Q2TBA0 621 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 DTHD1Q6ZMT9 781 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 OTOP1Q7RTM1 612 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 PLA2G4DQ86XP0 818 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 CCAR1Q8IX12 1150 aaKnown RBP8.69□□□□□ -1.02
RNF41-208ENST00000550379 ENGASEQ8NFI3 743 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 NEK9Q8TD19 979 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 PXYLP1Q8TE99 480 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 MAML3Q96JK9 1138 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 APBA2Q99767 749 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 TINF2Q9BSI4 451 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 TMEM60Q9H2L4 133 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 R3HDMLQ9H3Y0 253 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 CUEDC2Q9H467 287 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 CPA4Q9UI42 421 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 MCM3APO60318 1980 aa8.69□□□□□ -1.02
RNF41-208ENST00000550379 MYL1P05976 194 aa8.68□□□□□ -1.02
RNF41-208ENST00000550379 KCNA2P16389 499 aa8.68□□□□□ -1.02
RNF41-208ENST00000550379 SFNP31947 248 aa8.68□□□□□ -1.02
RNF41-208ENST00000550379 KRT76Q01546 638 aa8.68□□□□□ -1.02
RNF41-208ENST00000550379 MTMR1Q13613 665 aa8.68□□□□□ -1.02
RNF41-208ENST00000550379 NEDD9Q14511 834 aa8.68□□□□□ -1.02
RNF41-208ENST00000550379 KIF22Q14807 665 aa8.68□□□□□ -1.02
RNF41-208ENST00000550379 NFKBIBQ15653 356 aa8.68□□□□□ -1.02
RNF41-208ENST00000550379 IL17AQ16552 155 aa8.68□□□□□ -1.02
RNF41-208ENST00000550379 PRR16Q569H4 304 aa8.68□□□□□ -1.02
RNF41-208ENST00000550379 IQSEC1Q6DN90 963 aa8.68□□□□□ -1.02
RNF41-208ENST00000550379 ZNF746Q6NUN9 644 aaPredicted RBP8.68□□□□□ -1.02
RNF41-208ENST00000550379 CNNM4Q6P4Q7 775 aa8.68□□□□□ -1.02
RNF41-208ENST00000550379 SHC4Q6S5L8 630 aa8.68□□□□□ -1.02
RNF41-208ENST00000550379 SMAP1Q8IYB5 467 aaPredicted RBP8.68□□□□□ -1.02
RNF41-208ENST00000550379 IL31RAQ8NI17 732 aa8.68□□□□□ -1.02
RNF41-208ENST00000550379 SCFD2Q8WU76 684 aa8.68□□□□□ -1.02
RNF41-208ENST00000550379 ERO1AQ96HE7 468 aa8.68□□□□□ -1.02
RNF41-208ENST00000550379 HSD17B14Q9BPX1 270 aa8.68□□□□□ -1.02
RNF41-208ENST00000550379 POLR3CQ9BUI4 534 aaPredicted RBP8.68□□□□□ -1.02
RNF41-208ENST00000550379 TTC12Q9H892 705 aaPredicted RBP8.68□□□□□ -1.02
RNF41-208ENST00000550379 MAGEF1Q9HAY2 307 aa8.68□□□□□ -1.02
RNF41-208ENST00000550379 AGO4Q9HCK5 861 aaKnown RBP8.68□□□□□ -1.02
RNF41-208ENST00000550379 VAV3Q9UKW4 847 aa8.68□□□□□ -1.02
RNF41-208ENST00000550379 WDR81Q562E7 1941 aa8.68□□□□□ -1.02
RNF41-208ENST00000550379 IGKV6D-21A0A0A0MT36 114 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 TNPO2O14787 897 aaKnown RBP8.67□□□□□ -1.02
RNF41-208ENST00000550379 PEX10O60683 326 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 FKTNO75072 461 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 SNAI1O95863 264 aaPredicted RBP8.67□□□□□ -1.02
RNF41-208ENST00000550379 TAL1P17542 331 aaPredicted RBP8.67□□□□□ -1.02
RNF41-208ENST00000550379 EIF2AK2P19525 551 aaKnown RBP8.67□□□□□ -1.02
RNF41-208ENST00000550379 RPA1P27694 616 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 CTGFP29279 349 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 ZNF76P36508 570 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 PSMC4P43686 418 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 ME1P48163 572 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 FOSBP53539 338 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 FAM160A1Q05DH4 1040 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 PDE4DQ08499 809 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 SNW1Q13573 536 aaKnown RBP8.67□□□□□ -1.02
RNF41-208ENST00000550379 TMEM266Q2M3C6 531 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 MAP3K21Q5TCX8 1036 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 TAPT1Q6NXT6 567 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 KANK3Q6NY19 840 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 SAMD1Q6SPF0 538 aaPredicted RBP8.67□□□□□ -1.02
RNF41-208ENST00000550379 METTL7BQ6UX53 244 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 RBM43Q6ZSC3 357 aaKnown RBP8.67□□□□□ -1.02
RNF41-208ENST00000550379 PAXIP1Q6ZW49 1069 aaPredicted RBP8.67□□□□□ -1.02
RNF41-208ENST00000550379 ARMCX2Q7L311 632 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 DPP9Q86TI2 863 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 POTEDQ86YR6 584 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 LOXHD1Q8IVV2 1947 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 FMR1NBQ8N0W7 255 aaPredicted RBP8.67□□□□□ -1.02
RNF41-208ENST00000550379 CYP2W1Q8TAV3 490 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 TRIM47Q96LD4 638 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 FTOQ9C0B1 505 aaKnown RBP eCLIP8.67□□□□□ -1.02
RNF41-208ENST00000550379 NT5C3AQ9H0P0 336 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 STK17AQ9UEE5 414 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 SRRDQ9UH36 339 aa8.67□□□□□ -1.02
RNF41-208ENST00000550379 DDX41Q9UJV9 622 aaKnown RBP8.67□□□□□ -1.02
RNF41-208ENST00000550379 KDM3AQ9Y4C1 1321 aa8.66□□□□□ -1.02
RNF41-208ENST00000550379 GOLGA6L4A6NEF3 574 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms