RNA–Protein interactions for RNA: ENST00000550205.1

PXN-216, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-216ENST00000550205 IL25Q9H293 177 aa11.3□□□□□ -0.6
PXN-216ENST00000550205 LMCD1Q9NZU5 365 aa11.3□□□□□ -0.6
PXN-216ENST00000550205 PCDHA1Q9Y5I3 950 aa11.3□□□□□ -0.6
PXN-216ENST00000550205 PTPRSQ13332 1948 aa11.3□□□□□ -0.6
PXN-216ENST00000550205 LCHNA4D1U4 455 aa11.29□□□□□ -0.6
PXN-216ENST00000550205 ZNF286BP0CG31 522 aa11.29□□□□□ -0.6
PXN-216ENST00000550205 HOXC8P31273 242 aa11.29□□□□□ -0.6
PXN-216ENST00000550205 KCNQ1P51787 676 aa11.29□□□□□ -0.6
PXN-216ENST00000550205 DEFB103AP81534 67 aa11.29□□□□□ -0.6
PXN-216ENST00000550205 SP2Q02086 613 aa11.29□□□□□ -0.6
PXN-216ENST00000550205 TRAF1Q13077 416 aa11.29□□□□□ -0.6
PXN-216ENST00000550205 GRB10Q13322 594 aa11.29□□□□□ -0.6
PXN-216ENST00000550205 MKRN4PQ13434 485 aaPredicted RBP11.29□□□□□ -0.6
PXN-216ENST00000550205 MBTPS1Q14703 1052 aa11.29□□□□□ -0.6
PXN-216ENST00000550205 PGM5Q15124 567 aa11.29□□□□□ -0.6
PXN-216ENST00000550205 TCTN1Q2MV58 587 aa11.29□□□□□ -0.6
PXN-216ENST00000550205 HSDL1Q3SXM5 330 aa11.29□□□□□ -0.6
PXN-216ENST00000550205 CELF3Q5SZQ8 465 aaKnown RBP11.29□□□□□ -0.6
PXN-216ENST00000550205 KRT40Q6A162 431 aa11.29□□□□□ -0.6
PXN-216ENST00000550205 CYB5R4Q7L1T6 521 aa11.29□□□□□ -0.6
PXN-216ENST00000550205 RAD9AQ99638 391 aa11.29□□□□□ -0.6
PXN-216ENST00000550205 C16orf70Q9BSU1 422 aa11.29□□□□□ -0.6
PXN-216ENST00000550205 RIOX1Q9H6W3 641 aa11.29□□□□□ -0.6
PXN-216ENST00000550205 EMSYQ7Z589 1322 aa11.29□□□□□ -0.6
PXN-216ENST00000550205 COL4A4P53420 1690 aaPredicted RBP11.28□□□□□ -0.6
PXN-216ENST00000550205 UBA1P22314 1058 aaKnown RBP11.28□□□□□ -0.6
PXN-216ENST00000550205 IKBKEQ14164 716 aa11.28□□□□□ -0.6
PXN-216ENST00000550205 HIC1Q14526 733 aa11.28□□□□□ -0.6
PXN-216ENST00000550205 GRM4Q14833 912 aa11.28□□□□□ -0.6
PXN-216ENST00000550205 SKIV2LQ15477 1246 aaKnown RBP11.28□□□□□ -0.6
PXN-216ENST00000550205 SLC35G1Q2M3R5 365 aa11.28□□□□□ -0.6
PXN-216ENST00000550205 ZNF618Q5T7W0 954 aa11.28□□□□□ -0.6
PXN-216ENST00000550205 SPRED2Q7Z698 418 aa11.28□□□□□ -0.6
PXN-216ENST00000550205 TMCO2Q7Z6W1 182 aaPredicted RBP11.28□□□□□ -0.6
PXN-216ENST00000550205 SERINC5Q86VE9 423 aa11.28□□□□□ -0.6
PXN-216ENST00000550205 WNT8BQ93098 351 aa11.28□□□□□ -0.6
PXN-216ENST00000550205 HLA-CQ95604 372 aa11.28□□□□□ -0.6
PXN-216ENST00000550205 SPATA33Q96N06 139 aa11.28□□□□□ -0.6
PXN-216ENST00000550205 NECAB3Q96P71 396 aaPredicted RBP11.28□□□□□ -0.6
PXN-216ENST00000550205 ALG1Q9BT22 464 aa11.28□□□□□ -0.6
PXN-216ENST00000550205 TRIP12Q14669 1992 aaPredicted RBP11.28□□□□□ -0.6
PXN-216ENST00000550205 FRMPD4Q14CM0 1322 aa11.28□□□□□ -0.6
PXN-216ENST00000550205 MYH6P13533 1939 aa11.27□□□□□ -0.6
PXN-216ENST00000550205 LGR5O75473 907 aa11.27□□□□□ -0.61
PXN-216ENST00000550205 GGPS1O95749 300 aa11.27□□□□□ -0.61
PXN-216ENST00000550205 MYCLP12524 364 aaPredicted RBP11.27□□□□□ -0.61
PXN-216ENST00000550205 HOXA13P31271 388 aaPredicted RBP11.27□□□□□ -0.61
PXN-216ENST00000550205 ERVK-21P61565 698 aa11.27□□□□□ -0.61
PXN-216ENST00000550205 ZNF200P98182 395 aaPredicted RBP11.27□□□□□ -0.61
PXN-216ENST00000550205 TROAPQ12815 778 aa11.27□□□□□ -0.61
PXN-216ENST00000550205 IL31RAQ8NI17 732 aa11.27□□□□□ -0.61
PXN-216ENST00000550205 ZBED2Q9BTP6 218 aa11.27□□□□□ -0.61
PXN-216ENST00000550205 C1QTNF1Q9BXJ1 281 aa11.27□□□□□ -0.61
PXN-216ENST00000550205 SUGCTQ9HAC7 445 aa11.27□□□□□ -0.61
PXN-216ENST00000550205 PNMA6FA0A0J9YX94 578 aa11.26□□□□□ -0.61
PXN-216ENST00000550205 LINC01553A4QN01 128 aa11.26□□□□□ -0.61
PXN-216ENST00000550205 H3BRB1 525 aa11.26□□□□□ -0.61
PXN-216ENST00000550205 GCOM1H8Y6P7 765 aaPredicted RBP11.26□□□□□ -0.61
PXN-216ENST00000550205 CYTH3O43739 400 aa11.26□□□□□ -0.61
PXN-216ENST00000550205 CAND2O75155 1236 aa11.26□□□□□ -0.61
PXN-216ENST00000550205 STAM2O75886 525 aa11.26□□□□□ -0.61
PXN-216ENST00000550205 CYP21A2P08686 494 aa11.26□□□□□ -0.61
PXN-216ENST00000550205 POLR2MP0CAP2 368 aa11.26□□□□□ -0.61
PXN-216ENST00000550205 GSPT1P15170 499 aaKnown RBP11.26□□□□□ -0.61
PXN-216ENST00000550205 CCND2P30279 289 aa11.26□□□□□ -0.61
PXN-216ENST00000550205 ICAM3P32942 547 aa11.26□□□□□ -0.61
PXN-216ENST00000550205 TRDNQ13061 729 aa11.26□□□□□ -0.61
PXN-216ENST00000550205 EXOC6Q8TAG9 804 aa11.26□□□□□ -0.61
PXN-216ENST00000550205 INPP4AQ96PE3 977 aaPredicted RBP11.26□□□□□ -0.61
PXN-216ENST00000550205 TGS1Q96RS0 853 aaKnown RBP11.26□□□□□ -0.61
PXN-216ENST00000550205 PIGSQ96S52 555 aa11.26□□□□□ -0.61
PXN-216ENST00000550205 TUT1Q9H6E5 874 aaKnown RBP11.26□□□□□ -0.61
PXN-216ENST00000550205 MLXIPQ9HAP2 919 aa11.26□□□□□ -0.61
PXN-216ENST00000550205 INSL6Q9Y581 213 aa11.26□□□□□ -0.61
PXN-216ENST00000550205 U3KPZ7 1027 aaPredicted RBP11.26□□□□□ -0.61
PXN-216ENST00000550205 C17orf102A2RUQ5 167 aa11.25□□□□□ -0.61
PXN-216ENST00000550205 RSPH10B2B2RC85 870 aa11.25□□□□□ -0.61
PXN-216ENST00000550205 SPATA31C2B4DYI2 1134 aa11.25□□□□□ -0.61
PXN-216ENST00000550205 RSPH10BP0C881 870 aa11.25□□□□□ -0.61
PXN-216ENST00000550205 PDE4AP27815 886 aa11.25□□□□□ -0.61
PXN-216ENST00000550205 MRPS9P82933 396 aaKnown RBP11.25□□□□□ -0.61
PXN-216ENST00000550205 HTRA4P83105 476 aaPredicted RBP11.25□□□□□ -0.61
PXN-216ENST00000550205 GNPTABQ3T906 1256 aa11.25□□□□□ -0.61
PXN-216ENST00000550205 PLEKHG4Q58EX7 1191 aa11.25□□□□□ -0.61
PXN-216ENST00000550205 TTC22Q5TAA0 569 aa11.25□□□□□ -0.61
PXN-216ENST00000550205 METTL7BQ6UX53 244 aa11.25□□□□□ -0.61
PXN-216ENST00000550205 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.25□□□□□ -0.61
PXN-216ENST00000550205 HOMER1Q86YM7 354 aa11.25□□□□□ -0.61
PXN-216ENST00000550205 SP7Q8TDD2 431 aaPredicted RBP11.25□□□□□ -0.61
PXN-216ENST00000550205 GDPD5Q8WTR4 605 aa11.25□□□□□ -0.61
PXN-216ENST00000550205 GPKOWQ92917 476 aaPredicted RBP eCLIP11.25□□□□□ -0.61
PXN-216ENST00000550205 USP26Q9BXU7 913 aa11.25□□□□□ -0.61
PXN-216ENST00000550205 SENP2Q9HC62 589 aa11.25□□□□□ -0.61
PXN-216ENST00000550205 COL4A6Q14031 1691 aa11.24□□□□□ -0.61
PXN-216ENST00000550205 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.24□□□□□ -0.61
PXN-216ENST00000550205 ERICH2A1L162 156 aa11.24□□□□□ -0.61
PXN-216ENST00000550205 IFIT3O14879 490 aaKnown RBP11.24□□□□□ -0.61
PXN-216ENST00000550205 AMHP03971 560 aa11.24□□□□□ -0.61
PXN-216ENST00000550205 LGALS2P05162 132 aa11.24□□□□□ -0.61
PXN-216ENST00000550205 THPOP40225 353 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms