RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 MFSD5Q6N075 450 aa13.59□□□□□ -0.23
LETMD1-221ENST00000550100 RUFY3Q7L099 469 aa13.59□□□□□ -0.23
LETMD1-221ENST00000550100 Q7L0L9 218 aa13.59□□□□□ -0.23
LETMD1-221ENST00000550100 INPP4AQ96PE3 977 aaPredicted RBP13.59□□□□□ -0.23
LETMD1-221ENST00000550100 NOC4LQ9BVI4 516 aaKnown RBP13.59□□□□□ -0.23
LETMD1-221ENST00000550100 WNT8AQ9H1J5 351 aa13.59□□□□□ -0.23
LETMD1-221ENST00000550100 NCOA5Q9HCD5 579 aaKnown RBP13.59□□□□□ -0.23
LETMD1-221ENST00000550100 TMEM260Q9NX78 707 aa13.59□□□□□ -0.23
LETMD1-221ENST00000550100 MROH7Q68CQ1 1323 aa13.58□□□□□ -0.24
LETMD1-221ENST00000550100 ATP9AO75110 1047 aa13.58□□□□□ -0.24
LETMD1-221ENST00000550100 GGPS1O95749 300 aa13.58□□□□□ -0.24
LETMD1-221ENST00000550100 ZNF286BP0CG31 522 aa13.58□□□□□ -0.24
LETMD1-221ENST00000550100 HOXD8P13378 290 aaPredicted RBP13.58□□□□□ -0.24
LETMD1-221ENST00000550100 ITGB5P18084 799 aa13.58□□□□□ -0.24
LETMD1-221ENST00000550100 ICAM3P32942 547 aa13.58□□□□□ -0.24
LETMD1-221ENST00000550100 METAP2P50579 478 aaKnown RBP eCLIP13.58□□□□□ -0.24
LETMD1-221ENST00000550100 CCL23P55773 120 aa13.58□□□□□ -0.24
LETMD1-221ENST00000550100 CCT2P78371 535 aaKnown RBP13.58□□□□□ -0.24
LETMD1-221ENST00000550100 FPGSQ05932 587 aa13.58□□□□□ -0.24
LETMD1-221ENST00000550100 PCNX4Q63HM2 1172 aa13.58□□□□□ -0.24
LETMD1-221ENST00000550100 DHX37Q8IY37 1157 aaKnown RBP13.58□□□□□ -0.24
LETMD1-221ENST00000550100 PPTC7Q8NI37 304 aa13.58□□□□□ -0.24
LETMD1-221ENST00000550100 PHKBQ93100 1093 aa13.58□□□□□ -0.24
LETMD1-221ENST00000550100 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.58□□□□□ -0.24
LETMD1-221ENST00000550100 PCDHA6Q9UN73 950 aa13.58□□□□□ -0.24
LETMD1-221ENST00000550100 PCDHA8Q9Y5H6 950 aa13.58□□□□□ -0.24
LETMD1-221ENST00000550100 NID2Q14112 1375 aa13.58□□□□□ -0.24
LETMD1-221ENST00000550100 TRIP12Q14669 1992 aaPredicted RBP13.58□□□□□ -0.24
LETMD1-221ENST00000550100 EPB41L2O43491 1005 aaKnown RBP13.57□□□□□ -0.24
LETMD1-221ENST00000550100 KPNA6O60684 536 aa13.57□□□□□ -0.24
LETMD1-221ENST00000550100 RCAN1P53805 252 aa13.57□□□□□ -0.24
LETMD1-221ENST00000550100 FGD1P98174 961 aa13.57□□□□□ -0.24
LETMD1-221ENST00000550100 ZNF200P98182 395 aaPredicted RBP13.57□□□□□ -0.24
LETMD1-221ENST00000550100 LAMC2Q13753 1193 aa13.57□□□□□ -0.24
LETMD1-221ENST00000550100 TMEM240Q5SV17 173 aa13.57□□□□□ -0.24
LETMD1-221ENST00000550100 FAM109BQ6ICB4 259 aaPredicted RBP13.57□□□□□ -0.24
LETMD1-221ENST00000550100 GDF6Q6KF10 455 aaPredicted RBP13.57□□□□□ -0.24
LETMD1-221ENST00000550100 CYP2W1Q8TAV3 490 aa13.57□□□□□ -0.24
LETMD1-221ENST00000550100 SPATA33Q96N06 139 aa13.57□□□□□ -0.24
LETMD1-221ENST00000550100 HIPK3Q9H422 1215 aa13.57□□□□□ -0.24
LETMD1-221ENST00000550100 RIC8AQ9NPQ8 531 aa13.57□□□□□ -0.24
LETMD1-221ENST00000550100 BARHL2Q9NY43 387 aa13.57□□□□□ -0.24
LETMD1-221ENST00000550100 SCN5AQ14524 2016 aa13.56□□□□□ -0.24
LETMD1-221ENST00000550100 HAS3O00219 553 aa13.56□□□□□ -0.24
LETMD1-221ENST00000550100 TLR3O15455 904 aaKnown RBP13.56□□□□□ -0.24
LETMD1-221ENST00000550100 TGFB3P10600 412 aa13.56□□□□□ -0.24
LETMD1-221ENST00000550100 PSMA5P28066 241 aa13.56□□□□□ -0.24
LETMD1-221ENST00000550100 NAPAP54920 295 aa13.56□□□□□ -0.24
LETMD1-221ENST00000550100 DGKDQ16760 1214 aa13.56□□□□□ -0.24
LETMD1-221ENST00000550100 PFKFB3Q16875 520 aaPredicted RBP13.56□□□□□ -0.24
LETMD1-221ENST00000550100 FAM47CQ5HY64 1035 aa13.56□□□□□ -0.24
LETMD1-221ENST00000550100 NFRKBQ6P4R8 1299 aa13.56□□□□□ -0.24
LETMD1-221ENST00000550100 CYFIP1Q7L576 1253 aa13.56□□□□□ -0.24
LETMD1-221ENST00000550100 CUL5Q93034 780 aa13.56□□□□□ -0.24
LETMD1-221ENST00000550100 SCLYQ96I15 445 aa13.56□□□□□ -0.24
LETMD1-221ENST00000550100 C16orf70Q9BSU1 422 aa13.56□□□□□ -0.24
LETMD1-221ENST00000550100 TM6SF1Q9BZW5 370 aa13.56□□□□□ -0.24
LETMD1-221ENST00000550100 UBIAD1Q9Y5Z9 338 aa13.56□□□□□ -0.24
LETMD1-221ENST00000550100 TET1Q8NFU7 2136 aa13.56□□□□□ -0.24
LETMD1-221ENST00000550100 SMCO2A6NFE2 343 aa13.55□□□□□ -0.24
LETMD1-221ENST00000550100 EDIL3O43854 480 aa13.55□□□□□ -0.24
LETMD1-221ENST00000550100 CLK2P49760 499 aaKnown RBP13.55□□□□□ -0.24
LETMD1-221ENST00000550100 PSEN2P49810 448 aa13.55□□□□□ -0.24
LETMD1-221ENST00000550100 GPNMBQ14956 572 aa13.55□□□□□ -0.24
LETMD1-221ENST00000550100 BRDTQ58F21 947 aaPredicted RBP13.55□□□□□ -0.24
LETMD1-221ENST00000550100 ZNF365Q70YC5 407 aa13.55□□□□□ -0.24
LETMD1-221ENST00000550100 DHX38Q92620 1227 aaKnown RBP13.55□□□□□ -0.24
LETMD1-221ENST00000550100 WNT8BQ93098 351 aa13.55□□□□□ -0.24
LETMD1-221ENST00000550100 ALG1Q9BT22 464 aa13.55□□□□□ -0.24
LETMD1-221ENST00000550100 HDAC6Q9UBN7 1215 aa13.55□□□□□ -0.24
LETMD1-221ENST00000550100 CYP46A1Q9Y6A2 500 aa13.55□□□□□ -0.24
LETMD1-221ENST00000550100 CHD9Q3L8U1 2897 aa13.55□□□□□ -0.24
LETMD1-221ENST00000550100 PRPF3O43395 683 aaKnown RBP13.55□□□□□ -0.24
LETMD1-221ENST00000550100 PPFIA4O75335 1185 aa13.55□□□□□ -0.24
LETMD1-221ENST00000550100 F2P00734 622 aa13.55□□□□□ -0.24
LETMD1-221ENST00000550100 SCG2P13521 617 aa13.55□□□□□ -0.24
LETMD1-221ENST00000550100 KCNA2P16389 499 aa13.55□□□□□ -0.24
LETMD1-221ENST00000550100 MFSD10Q14728 455 aa13.55□□□□□ -0.24
LETMD1-221ENST00000550100 KIAA0753Q2KHM9 967 aa13.55□□□□□ -0.24
LETMD1-221ENST00000550100 RASIP1Q5U651 963 aa13.55□□□□□ -0.24
LETMD1-221ENST00000550100 KCNV1Q6PIU1 500 aa13.55□□□□□ -0.24
LETMD1-221ENST00000550100 GPR20Q99678 358 aa13.55□□□□□ -0.24
LETMD1-221ENST00000550100 SEZ6LQ9BYH1 1024 aa13.55□□□□□ -0.24
LETMD1-221ENST00000550100 MLXIPQ9HAP2 919 aa13.55□□□□□ -0.24
LETMD1-221ENST00000550100 CXXC1Q9P0U4 656 aaPredicted RBP13.55□□□□□ -0.24
LETMD1-221ENST00000550100 EYSQ5T1H1 3165 aa13.54□□□□□ -0.24
LETMD1-221ENST00000550100 GRXCR1A8MXD5 290 aa13.54□□□□□ -0.24
LETMD1-221ENST00000550100 FIBPO43427 364 aa13.54□□□□□ -0.24
LETMD1-221ENST00000550100 STAM2O75886 525 aa13.54□□□□□ -0.24
LETMD1-221ENST00000550100 ADCY7P51828 1080 aa13.54□□□□□ -0.24
LETMD1-221ENST00000550100 STK3Q13188 491 aa13.54□□□□□ -0.24
LETMD1-221ENST00000550100 SESTD1Q86VW0 696 aa13.54□□□□□ -0.24
LETMD1-221ENST00000550100 TRIM50Q86XT4 487 aa13.54□□□□□ -0.24
LETMD1-221ENST00000550100 AIFM3Q96NN9 605 aa13.54□□□□□ -0.24
LETMD1-221ENST00000550100 PDRG1Q9NUG6 133 aa13.54□□□□□ -0.24
LETMD1-221ENST00000550100 PKD2L1Q9P0L9 805 aa13.54□□□□□ -0.24
LETMD1-221ENST00000550100 LGALS2P05162 132 aa13.53□□□□□ -0.24
LETMD1-221ENST00000550100 ARP10275 920 aa13.53□□□□□ -0.24
LETMD1-221ENST00000550100 IFNAR1P17181 557 aa13.53□□□□□ -0.24
LETMD1-221ENST00000550100 SP4Q02446 784 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms