RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 KDM4AO75164 1064 aa9.96□□□□□ -0.82
TROAP-208ENST00000548817 TBX10O75333 385 aa9.96□□□□□ -0.82
TROAP-208ENST00000548817 LGR5O75473 907 aa9.96□□□□□ -0.82
TROAP-208ENST00000548817 KRT37O76014 449 aa9.96□□□□□ -0.82
TROAP-208ENST00000548817 ICAM1P05362 532 aa9.96□□□□□ -0.82
TROAP-208ENST00000548817 CKBP12277 381 aa9.96□□□□□ -0.82
TROAP-208ENST00000548817 ICAM3P32942 547 aa9.96□□□□□ -0.82
TROAP-208ENST00000548817 DLX2Q07687 328 aaPredicted RBP9.96□□□□□ -0.82
TROAP-208ENST00000548817 HYAL1Q12794 435 aa9.96□□□□□ -0.82
TROAP-208ENST00000548817 RRP12Q5JTH9 1297 aaKnown RBP9.96□□□□□ -0.82
TROAP-208ENST00000548817 CTAGE1Q96RT6 745 aa9.96□□□□□ -0.82
TROAP-208ENST00000548817 C11orf84Q9BUA3 381 aaPredicted RBP9.96□□□□□ -0.82
TROAP-208ENST00000548817 RWDD3Q9Y3V2 267 aa9.96□□□□□ -0.82
TROAP-208ENST00000548817 PKD1L2Q7Z442 2459 aa9.96□□□□□ -0.82
TROAP-208ENST00000548817 LCTP09848 1927 aa9.95□□□□□ -0.82
TROAP-208ENST00000548817 MED19A0JLT2 244 aaPredicted RBP9.95□□□□□ -0.82
TROAP-208ENST00000548817 PTPDC1A2A3K4 754 aa9.95□□□□□ -0.82
TROAP-208ENST00000548817 C5orf67F2Z3F1 127 aa9.95□□□□□ -0.82
TROAP-208ENST00000548817 TOP1P11387 765 aaKnown RBP9.95□□□□□ -0.82
TROAP-208ENST00000548817 BAATQ14032 418 aaPredicted RBP9.95□□□□□ -0.82
TROAP-208ENST00000548817 PPP2R5BQ15173 497 aa9.95□□□□□ -0.82
TROAP-208ENST00000548817 CLUL1Q15846 466 aa9.95□□□□□ -0.82
TROAP-208ENST00000548817 MUM1L1Q5H9M0 696 aa9.95□□□□□ -0.82
TROAP-208ENST00000548817 ANKRD45Q5TZF3 282 aa9.95□□□□□ -0.82
TROAP-208ENST00000548817 SYDE2Q5VT97 1194 aa9.95□□□□□ -0.82
TROAP-208ENST00000548817 MYOCDQ8IZQ8 938 aa9.95□□□□□ -0.82
TROAP-208ENST00000548817 ADSSL1Q8N142 457 aa9.95□□□□□ -0.82
TROAP-208ENST00000548817 PI4K2BQ8TCG2 481 aa9.95□□□□□ -0.82
TROAP-208ENST00000548817 SCFD2Q8WU76 684 aa9.95□□□□□ -0.82
TROAP-208ENST00000548817 PPP2R3CQ969Q6 453 aa9.95□□□□□ -0.82
TROAP-208ENST00000548817 EVI5LQ96CN4 794 aa9.95□□□□□ -0.82
TROAP-208ENST00000548817 MSLNLQ96KJ4 702 aa9.95□□□□□ -0.82
TROAP-208ENST00000548817 YME1L1Q96TA2 773 aa9.95□□□□□ -0.82
TROAP-208ENST00000548817 GPCPD1Q9NPB8 672 aa9.95□□□□□ -0.82
TROAP-208ENST00000548817 IL17RBQ9NRM6 502 aa9.95□□□□□ -0.82
TROAP-208ENST00000548817 HELLSQ9NRZ9 838 aa9.95□□□□□ -0.82
TROAP-208ENST00000548817 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.95□□□□□ -0.82
TROAP-208ENST00000548817 ATG2AQ2TAZ0 1938 aa9.95□□□□□ -0.82
TROAP-208ENST00000548817 ATRXP46100 2492 aa9.94□□□□□ -0.82
TROAP-208ENST00000548817 CEP250Q9BV73 2442 aa9.94□□□□□ -0.82
TROAP-208ENST00000548817 ORC4O43929 436 aa9.94□□□□□ -0.82
TROAP-208ENST00000548817 NMT2O60551 498 aa9.94□□□□□ -0.82
TROAP-208ENST00000548817 PDE4DQ08499 809 aa9.94□□□□□ -0.82
TROAP-208ENST00000548817 COASYQ13057 564 aa9.94□□□□□ -0.82
TROAP-208ENST00000548817 PTK7Q13308 1070 aa9.94□□□□□ -0.82
TROAP-208ENST00000548817 ADAM15Q13444 863 aa9.94□□□□□ -0.82
TROAP-208ENST00000548817 ALX1Q15699 326 aa9.94□□□□□ -0.82
TROAP-208ENST00000548817 PTPN21Q16825 1174 aa9.94□□□□□ -0.82
TROAP-208ENST00000548817 TCTN1Q2MV58 587 aa9.94□□□□□ -0.82
TROAP-208ENST00000548817 GDF6Q6KF10 455 aaPredicted RBP9.94□□□□□ -0.82
TROAP-208ENST00000548817 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.94□□□□□ -0.82
TROAP-208ENST00000548817 DGLUCYQ7Z3D6 616 aa9.94□□□□□ -0.82
TROAP-208ENST00000548817 SMRP1Q8NCR6 262 aa9.94□□□□□ -0.82
TROAP-208ENST00000548817 OTUD7AQ8TE49 926 aaPredicted RBP9.94□□□□□ -0.82
TROAP-208ENST00000548817 DHX38Q92620 1227 aaKnown RBP9.94□□□□□ -0.82
TROAP-208ENST00000548817 PHF7Q9BWX1 381 aaPredicted RBP9.94□□□□□ -0.82
TROAP-208ENST00000548817 INCENPQ9NQS7 918 aa9.94□□□□□ -0.82
TROAP-208ENST00000548817 ANAPC4Q9UJX5 808 aa9.94□□□□□ -0.82
TROAP-208ENST00000548817 ATF7P17544 494 aaPredicted RBP9.93□□□□□ -0.82
TROAP-208ENST00000548817 CALML3P27482 149 aa9.93□□□□□ -0.82
TROAP-208ENST00000548817 SLC16A2P36021 539 aa9.93□□□□□ -0.82
TROAP-208ENST00000548817 NDUFV1P49821 464 aa9.93□□□□□ -0.82
TROAP-208ENST00000548817 ALDH5A1P51649 535 aaPredicted RBP9.93□□□□□ -0.82
TROAP-208ENST00000548817 MFAP1P55081 439 aaKnown RBP9.93□□□□□ -0.82
TROAP-208ENST00000548817 PUM1Q14671 1186 aaKnown RBP eCLIP9.93□□□□□ -0.82
TROAP-208ENST00000548817 MCMDC2Q4G0Z9 681 aa9.93□□□□□ -0.82
TROAP-208ENST00000548817 TTBK2Q6IQ55 1244 aa9.93□□□□□ -0.82
TROAP-208ENST00000548817 TRAF7Q6Q0C0 670 aa9.93□□□□□ -0.82
TROAP-208ENST00000548817 BTNL9Q6UXG8 535 aa9.93□□□□□ -0.82
TROAP-208ENST00000548817 RNF207Q6ZRF8 634 aa9.93□□□□□ -0.82
TROAP-208ENST00000548817 MFSD6Q6ZSS7 791 aa9.93□□□□□ -0.82
TROAP-208ENST00000548817 TOP1MTQ969P6 601 aa9.93□□□□□ -0.82
TROAP-208ENST00000548817 RIPOR3Q96MK2 946 aa9.93□□□□□ -0.82
TROAP-208ENST00000548817 TMEM47Q9BQJ4 181 aa9.93□□□□□ -0.82
TROAP-208ENST00000548817 RANBP17Q9H2T7 1088 aaKnown RBP9.93□□□□□ -0.82
TROAP-208ENST00000548817 GTF2IRD1Q9UHL9 959 aa9.93□□□□□ -0.82
TROAP-208ENST00000548817 PCDHB15Q9Y5E8 787 aa9.93□□□□□ -0.82
TROAP-208ENST00000548817 DDX49Q9Y6V7 483 aaKnown RBP9.93□□□□□ -0.82
TROAP-208ENST00000548817 DNAH14Q0VDD8 3507 aa9.93□□□□□ -0.82
TROAP-208ENST00000548817 FRMPD2Q68DX3 1309 aaPredicted RBP9.92□□□□□ -0.82
TROAP-208ENST00000548817 TRIM6-TRIM34B2RNG4 842 aa9.92□□□□□ -0.82
TROAP-208ENST00000548817 MMP1P03956 469 aa9.92□□□□□ -0.82
TROAP-208ENST00000548817 CTNNB1P35222 781 aa9.92□□□□□ -0.82
TROAP-208ENST00000548817 CHMP4BP1P59074 171 aa9.92□□□□□ -0.82
TROAP-208ENST00000548817 MBTPS1Q14703 1052 aa9.92□□□□□ -0.82
TROAP-208ENST00000548817 PLEKHG4Q58EX7 1191 aa9.92□□□□□ -0.82
TROAP-208ENST00000548817 TICAM2Q86XR7 235 aa9.92□□□□□ -0.82
TROAP-208ENST00000548817 DBF4BQ8NFT6 615 aa9.92□□□□□ -0.82
TROAP-208ENST00000548817 TTC14Q96N46 770 aa9.92□□□□□ -0.82
TROAP-208ENST00000548817 RNF41Q9H4P4 317 aaPredicted RBP9.92□□□□□ -0.82
TROAP-208ENST00000548817 TCP11L1Q9NUJ3 509 aa9.92□□□□□ -0.82
TROAP-208ENST00000548817 FSD2A1L4K1 749 aa9.91□□□□□ -0.82
TROAP-208ENST00000548817 NFIBO00712 420 aa9.91□□□□□ -0.82
TROAP-208ENST00000548817 FGAP02671 866 aa9.91□□□□□ -0.82
TROAP-208ENST00000548817 PCP11498 1178 aaKnown RBP9.91□□□□□ -0.82
TROAP-208ENST00000548817 CASTP20810 708 aaKnown RBP9.91□□□□□ -0.82
TROAP-208ENST00000548817 BMPR1AP36894 532 aa9.91□□□□□ -0.82
TROAP-208ENST00000548817 RRP1P56182 461 aaKnown RBP9.91□□□□□ -0.82
TROAP-208ENST00000548817 TRIM71Q2Q1W2 868 aaKnown RBP9.91□□□□□ -0.82
TROAP-208ENST00000548817 CCDC178Q5BJE1 867 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms