RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 SUGCTQ9HAC7 445 aa19.19■□□□□ 0.66
SSH1-208ENST00000548522 DIAPH3Q9NSV4 1193 aa19.19■□□□□ 0.66
SSH1-208ENST00000548522 KIAA1217Q5T5P2 1943 aa19.19■□□□□ 0.66
SSH1-208ENST00000548522 LINC01553A4QN01 128 aa19.18■□□□□ 0.66
SSH1-208ENST00000548522 MYCLP12524 364 aaPredicted RBP19.18■□□□□ 0.66
SSH1-208ENST00000548522 HOXD8P13378 290 aaPredicted RBP19.18■□□□□ 0.66
SSH1-208ENST00000548522 HSDL1Q3SXM5 330 aa19.18■□□□□ 0.66
SSH1-208ENST00000548522 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.18■□□□□ 0.66
SSH1-208ENST00000548522 GPKOWQ92917 476 aaPredicted RBP eCLIP19.18■□□□□ 0.66
SSH1-208ENST00000548522 PDCD2LQ9BRP1 358 aa19.18■□□□□ 0.66
SSH1-208ENST00000548522 C1QTNF1Q9BXJ1 281 aa19.18■□□□□ 0.66
SSH1-208ENST00000548522 MAF1Q9H063 256 aa19.18■□□□□ 0.66
SSH1-208ENST00000548522 SP2Q02086 613 aa19.17■□□□□ 0.66
SSH1-208ENST00000548522 PTK7Q13308 1070 aa19.17■□□□□ 0.66
SSH1-208ENST00000548522 LAMC2Q13753 1193 aa19.17■□□□□ 0.66
SSH1-208ENST00000548522 CCDC178Q5BJE1 867 aa19.17■□□□□ 0.66
SSH1-208ENST00000548522 CHD1LQ86WJ1 897 aa19.17■□□□□ 0.66
SSH1-208ENST00000548522 DHX37Q8IY37 1157 aaKnown RBP19.17■□□□□ 0.66
SSH1-208ENST00000548522 RAD9AQ99638 391 aa19.17■□□□□ 0.66
SSH1-208ENST00000548522 KATNAL1Q9BW62 490 aa19.17■□□□□ 0.66
SSH1-208ENST00000548522 AMNQ9BXJ7 453 aa19.17■□□□□ 0.66
SSH1-208ENST00000548522 CD320Q9NPF0 282 aa19.17■□□□□ 0.66
SSH1-208ENST00000548522 ABHD14A-ACY1A0A1B0GW23 586 aa19.16■□□□□ 0.66
SSH1-208ENST00000548522 GGPS1O95749 300 aa19.16■□□□□ 0.66
SSH1-208ENST00000548522 IGHDP01880 384 aa19.16■□□□□ 0.66
SSH1-208ENST00000548522 UBA1P22314 1058 aaKnown RBP19.16■□□□□ 0.66
SSH1-208ENST00000548522 ERVK-21P61565 698 aa19.16■□□□□ 0.66
SSH1-208ENST00000548522 GHRHRQ02643 423 aa19.16■□□□□ 0.66
SSH1-208ENST00000548522 MKRN4PQ13434 485 aaPredicted RBP19.16■□□□□ 0.66
SSH1-208ENST00000548522 IMMTQ16891 758 aaKnown RBP19.16■□□□□ 0.66
SSH1-208ENST00000548522 MYSM1Q5VVJ2 828 aa19.16■□□□□ 0.66
SSH1-208ENST00000548522 CYB5R4Q7L1T6 521 aa19.16■□□□□ 0.66
SSH1-208ENST00000548522 MTMR8Q96EF0 704 aa19.16■□□□□ 0.66
SSH1-208ENST00000548522 SPATA33Q96N06 139 aa19.16■□□□□ 0.66
SSH1-208ENST00000548522 C17orf80Q9BSJ5 609 aa19.16■□□□□ 0.66
SSH1-208ENST00000548522 UBAC1Q9BSL1 405 aa19.16■□□□□ 0.66
SSH1-208ENST00000548522 DSCC1Q9BVC3 393 aa19.16■□□□□ 0.66
SSH1-208ENST00000548522 OSBPL7Q9BZF2 842 aa19.16■□□□□ 0.66
SSH1-208ENST00000548522 OSBPL3Q9H4L5 887 aa19.16■□□□□ 0.66
SSH1-208ENST00000548522 BCAS3Q9H6U6 928 aa19.16■□□□□ 0.66
SSH1-208ENST00000548522 MAD2L2Q9UI95 211 aa19.16■□□□□ 0.66
SSH1-208ENST00000548522 NUCB1Q02818 461 aa19.15■□□□□ 0.66
SSH1-208ENST00000548522 PGM5Q15124 567 aa19.15■□□□□ 0.66
SSH1-208ENST00000548522 SEC23AQ15436 765 aa19.15■□□□□ 0.66
SSH1-208ENST00000548522 CELF3Q5SZQ8 465 aaKnown RBP19.15■□□□□ 0.66
SSH1-208ENST00000548522 IFIT1BQ5T764 474 aaKnown RBP19.15■□□□□ 0.66
SSH1-208ENST00000548522 HOMER1Q86YM7 354 aa19.15■□□□□ 0.66
SSH1-208ENST00000548522 TGS1Q96RS0 853 aaKnown RBP19.15■□□□□ 0.66
SSH1-208ENST00000548522 C16orf70Q9BSU1 422 aa19.15■□□□□ 0.66
SSH1-208ENST00000548522 LRFN3Q9BTN0 628 aa19.15■□□□□ 0.66
SSH1-208ENST00000548522 C11orf16Q9NQ32 467 aa19.15■□□□□ 0.66
SSH1-208ENST00000548522 FAM86C2PA6NEL3 165 aa19.14■□□□□ 0.65
SSH1-208ENST00000548522 KLRF2D3W0D1 207 aa19.14■□□□□ 0.65
SSH1-208ENST00000548522 LGR5O75473 907 aa19.14■□□□□ 0.65
SSH1-208ENST00000548522 PARNO95453 639 aaKnown RBP19.14■□□□□ 0.65
SSH1-208ENST00000548522 THPOP40225 353 aa19.14■□□□□ 0.65
SSH1-208ENST00000548522 NT5C2P49902 561 aa19.14■□□□□ 0.65
SSH1-208ENST00000548522 IKBKEQ14164 716 aa19.14■□□□□ 0.65
SSH1-208ENST00000548522 STOX1Q6ZVD7 989 aa19.14■□□□□ 0.65
SSH1-208ENST00000548522 DBF4BQ8NFT6 615 aa19.14■□□□□ 0.65
SSH1-208ENST00000548522 FAM122AQ96E09 287 aa19.14■□□□□ 0.65
SSH1-208ENST00000548522 SENP2Q9HC62 589 aa19.14■□□□□ 0.65
SSH1-208ENST00000548522 PCDHA1Q9Y5I3 950 aa19.14■□□□□ 0.65
SSH1-208ENST00000548522 ZBTB5O15062 677 aa19.13■□□□□ 0.65
SSH1-208ENST00000548522 SERINC5Q86VE9 423 aa19.13■□□□□ 0.65
SSH1-208ENST00000548522 VSIG10LQ86VR7 867 aa19.13■□□□□ 0.65
SSH1-208ENST00000548522 MYOCDQ8IZQ8 938 aa19.13■□□□□ 0.65
SSH1-208ENST00000548522 KRT23Q9C075 422 aa19.13■□□□□ 0.65
SSH1-208ENST00000548522 UBE2ZQ9H832 354 aaPredicted RBP19.13■□□□□ 0.65
SSH1-208ENST00000548522 TELO2Q9Y4R8 837 aa19.13■□□□□ 0.65
SSH1-208ENST00000548522 MYH6P13533 1939 aa19.12■□□□□ 0.65
SSH1-208ENST00000548522 PALM3A6NDB9 673 aaPredicted RBP19.12■□□□□ 0.65
SSH1-208ENST00000548522 PPFIA4O75335 1185 aa19.12■□□□□ 0.65
SSH1-208ENST00000548522 CTSHP09668 335 aa19.12■□□□□ 0.65
SSH1-208ENST00000548522 FCHSD1Q86WN1 690 aa19.12■□□□□ 0.65
SSH1-208ENST00000548522 PIGSQ96S52 555 aa19.12■□□□□ 0.65
SSH1-208ENST00000548522 LMCD1Q9NZU5 365 aa19.12■□□□□ 0.65
SSH1-208ENST00000548522 TAF6LQ9Y6J9 622 aa19.12■□□□□ 0.65
SSH1-208ENST00000548522 SIP14410 1827 aa19.11■□□□□ 0.65
SSH1-208ENST00000548522 RSPH10B2B2RC85 870 aa19.11■□□□□ 0.65
SSH1-208ENST00000548522 CYTH3O43739 400 aa19.11■□□□□ 0.65
SSH1-208ENST00000548522 EFCAB14O75071 495 aa19.11■□□□□ 0.65
SSH1-208ENST00000548522 RSPH10BP0C881 870 aa19.11■□□□□ 0.65
SSH1-208ENST00000548522 KCNA5P22460 613 aa19.11■□□□□ 0.65
SSH1-208ENST00000548522 HOXC8P31273 242 aa19.11■□□□□ 0.65
SSH1-208ENST00000548522 CNNM2Q9H8M5 875 aa19.11■□□□□ 0.65
SSH1-208ENST00000548522 EMSYQ7Z589 1322 aa19.1■□□□□ 0.65
SSH1-208ENST00000548522 TREHO43280 583 aa19.1■□□□□ 0.65
SSH1-208ENST00000548522 LGALS2P05162 132 aa19.1■□□□□ 0.65
SSH1-208ENST00000548522 SMIM10L2AP0DMW4 78 aa19.1■□□□□ 0.65
SSH1-208ENST00000548522 SMIM10L2BP0DMW5 78 aa19.1■□□□□ 0.65
SSH1-208ENST00000548522 CCND2P30279 289 aa19.1■□□□□ 0.65
SSH1-208ENST00000548522 HTRA4P83105 476 aaPredicted RBP19.1■□□□□ 0.65
SSH1-208ENST00000548522 PLEKHG4Q58EX7 1191 aa19.1■□□□□ 0.65
SSH1-208ENST00000548522 TMEM31Q5JXX7 168 aa19.1■□□□□ 0.65
SSH1-208ENST00000548522 TRIM50Q86XT4 487 aa19.1■□□□□ 0.65
SSH1-208ENST00000548522 FBXO22Q8NEZ5 403 aa19.1■□□□□ 0.65
SSH1-208ENST00000548522 ATP6V0A1Q93050 837 aa19.1■□□□□ 0.65
SSH1-208ENST00000548522 RWDD1Q9H446 243 aaPredicted RBP19.1■□□□□ 0.65
SSH1-208ENST00000548522 CTNNA3Q9UI47 895 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms