RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 GLI4P10075 376 aa5.72□□□□□ -1.49
PTCH1-216ENST00000548379 PRKCAP17252 672 aa5.72□□□□□ -1.49
PTCH1-216ENST00000548379 SNX17Q15036 470 aa5.72□□□□□ -1.49
PTCH1-216ENST00000548379 PLCL1Q15111 1095 aa5.72□□□□□ -1.49
PTCH1-216ENST00000548379 GPR19Q15760 415 aa5.72□□□□□ -1.49
PTCH1-216ENST00000548379 SKOR2Q2VWA4 1001 aaPredicted RBP5.72□□□□□ -1.49
PTCH1-216ENST00000548379 EMC4Q5J8M3 183 aa5.72□□□□□ -1.49
PTCH1-216ENST00000548379 HHIPL2Q6UWX4 724 aa5.72□□□□□ -1.49
PTCH1-216ENST00000548379 OTOP3Q7RTS5 596 aa5.72□□□□□ -1.49
PTCH1-216ENST00000548379 SMC1BQ8NDV3 1235 aa5.72□□□□□ -1.49
PTCH1-216ENST00000548379 FLAD1Q8NFF5 587 aa5.72□□□□□ -1.49
PTCH1-216ENST00000548379 NUP43Q8NFH3 380 aa5.72□□□□□ -1.49
PTCH1-216ENST00000548379 OR2W6PQ8NHA6 318 aa5.72□□□□□ -1.49
PTCH1-216ENST00000548379 SH3RF2Q8TEC5 729 aa5.72□□□□□ -1.49
PTCH1-216ENST00000548379 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.72□□□□□ -1.49
PTCH1-216ENST00000548379 CHAMP1Q96JM3 812 aa5.72□□□□□ -1.49
PTCH1-216ENST00000548379 PDGFDQ9GZP0 370 aaPredicted RBP5.72□□□□□ -1.49
PTCH1-216ENST00000548379 NKRFO15226 690 aaKnown RBP eCLIP5.71□□□□□ -1.5
PTCH1-216ENST00000548379 GPR39O43194 453 aa5.71□□□□□ -1.5
PTCH1-216ENST00000548379 SRGAP3O43295 1099 aa5.71□□□□□ -1.5
PTCH1-216ENST00000548379 ZEB2O60315 1214 aa5.71□□□□□ -1.5
PTCH1-216ENST00000548379 RAB11FIP3O75154 756 aa5.71□□□□□ -1.5
PTCH1-216ENST00000548379 TADA3O75528 432 aa5.71□□□□□ -1.5
PTCH1-216ENST00000548379 ZBTB48P10074 688 aaPredicted RBP5.71□□□□□ -1.5
PTCH1-216ENST00000548379 PNLIPP16233 465 aa5.71□□□□□ -1.5
PTCH1-216ENST00000548379 PDE6AP16499 860 aa5.71□□□□□ -1.5
PTCH1-216ENST00000548379 CPEP16870 476 aa5.71□□□□□ -1.5
PTCH1-216ENST00000548379 SLC6A11P48066 632 aa5.71□□□□□ -1.5
PTCH1-216ENST00000548379 DNM2P50570 870 aa5.71□□□□□ -1.5
PTCH1-216ENST00000548379 STRN3Q13033 797 aa5.71□□□□□ -1.5
PTCH1-216ENST00000548379 STAT4Q14765 748 aa5.71□□□□□ -1.5
PTCH1-216ENST00000548379 CRY1Q16526 586 aa5.71□□□□□ -1.5
PTCH1-216ENST00000548379 ARHGAP44Q17R89 818 aa5.71□□□□□ -1.5
PTCH1-216ENST00000548379 ZNF792Q3KQV3 632 aa5.71□□□□□ -1.5
PTCH1-216ENST00000548379 WWC2Q6AWC2 1192 aa5.71□□□□□ -1.5
PTCH1-216ENST00000548379 LHFPL2Q6ZUX7 228 aa5.71□□□□□ -1.5
PTCH1-216ENST00000548379 TP53INP2Q8IXH6 220 aa5.71□□□□□ -1.5
PTCH1-216ENST00000548379 UHMK1Q8TAS1 419 aaKnown RBP5.71□□□□□ -1.5
PTCH1-216ENST00000548379 KCNJ15Q99712 375 aa5.71□□□□□ -1.5
PTCH1-216ENST00000548379 TNFRSF12AQ9NP84 129 aa5.71□□□□□ -1.5
PTCH1-216ENST00000548379 CABP5Q9NP86 173 aa5.71□□□□□ -1.5
PTCH1-216ENST00000548379 SLC6A20Q9NP91 592 aa5.71□□□□□ -1.5
PTCH1-216ENST00000548379 BTG4Q9NY30 223 aa5.71□□□□□ -1.5
PTCH1-216ENST00000548379 ALG1L2C9J202 215 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 NEMP1O14524 444 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 DGKIO75912 1065 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 PDGFRBP09619 1106 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 GNAT1P11488 350 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 ATP2A2P16615 1042 aaKnown RBP5.7□□□□□ -1.5
PTCH1-216ENST00000548379 TRHRP34981 398 aaPredicted RBP5.7□□□□□ -1.5
PTCH1-216ENST00000548379 ADCYAP1R1P41586 468 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 LSSP48449 732 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 SCNN1BP51168 640 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 JAM2P57087 298 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 ST5P78524 1137 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 CYP4F8P98187 520 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 SPIRE1Q08AE8 756 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 ZMYM1Q5SVZ6 1142 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 CYP4F22Q6NT55 531 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 NECAB2Q7Z6G3 386 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 OSTM1Q86WC4 334 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 NXPE1Q8N323 547 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 CISD2Q8N5K1 135 aaKnown RBP5.7□□□□□ -1.5
PTCH1-216ENST00000548379 NETO2Q8NC67 525 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 MYLIPQ8WY64 445 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 TTC1Q99614 292 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 C19orf44Q9H6X5 657 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 IFT22Q9H7X7 185 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.7□□□□□ -1.5
PTCH1-216ENST00000548379 HOMER2Q9NSB8 354 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 CATSPERZQ9NTU4 200 aa5.7□□□□□ -1.5
PTCH1-216ENST00000548379 COA3Q9Y2R0 106 aaPredicted RBP5.7□□□□□ -1.5
PTCH1-216ENST00000548379 BICRAQ9NZM4 1560 aa5.69□□□□□ -1.5
PTCH1-216ENST00000548379 PTPDC1A2A3K4 754 aa5.69□□□□□ -1.5
PTCH1-216ENST00000548379 MAN2B1O00754 1011 aa5.69□□□□□ -1.5
PTCH1-216ENST00000548379 NTRK1P04629 796 aa5.69□□□□□ -1.5
PTCH1-216ENST00000548379 COL6A2P12110 1019 aa5.69□□□□□ -1.5
PTCH1-216ENST00000548379 RAC2P15153 192 aa5.69□□□□□ -1.5
PTCH1-216ENST00000548379 TACR1P25103 407 aa5.69□□□□□ -1.5
PTCH1-216ENST00000548379 EPHA5P54756 1037 aa5.69□□□□□ -1.5
PTCH1-216ENST00000548379 EVA1CP58658 441 aa5.69□□□□□ -1.5
PTCH1-216ENST00000548379 ERVFRD-1P60508 538 aa5.69□□□□□ -1.5
PTCH1-216ENST00000548379 PLEKHG6Q3KR16 790 aa5.69□□□□□ -1.5
PTCH1-216ENST00000548379 RNF219Q5W0B1 726 aaPredicted RBP5.69□□□□□ -1.5
PTCH1-216ENST00000548379 ARHGAP36Q6ZRI8 547 aa5.69□□□□□ -1.5
PTCH1-216ENST00000548379 CBLL1Q75N03 491 aa5.69□□□□□ -1.5
PTCH1-216ENST00000548379 NOSTRINQ8IVI9 506 aa5.69□□□□□ -1.5
PTCH1-216ENST00000548379 C2orf69Q8N8R5 385 aa5.69□□□□□ -1.5
PTCH1-216ENST00000548379 ATL2Q8NHH9 583 aa5.69□□□□□ -1.5
PTCH1-216ENST00000548379 PIP4K2CQ8TBX8 421 aa5.69□□□□□ -1.5
PTCH1-216ENST00000548379 WDR66Q8TBY9 1149 aa5.69□□□□□ -1.5
PTCH1-216ENST00000548379 USP7Q93009 1102 aa5.69□□□□□ -1.5
PTCH1-216ENST00000548379 BOCQ9BWV1 1114 aa5.69□□□□□ -1.5
PTCH1-216ENST00000548379 IRF2BPLQ9H1B7 796 aa5.69□□□□□ -1.5
PTCH1-216ENST00000548379 SRPK3Q9UPE1 567 aa5.69□□□□□ -1.5
PTCH1-216ENST00000548379 APOBEC2Q9Y235 224 aaKnown RBP5.69□□□□□ -1.5
PTCH1-216ENST00000548379 A0A1W2PQ27 194 aa5.68□□□□□ -1.5
PTCH1-216ENST00000548379 A0A1W2PQ64 194 aa5.68□□□□□ -1.5
PTCH1-216ENST00000548379 A0A1W2PQC6 194 aa5.68□□□□□ -1.5
PTCH1-216ENST00000548379 A0A1W2PQD8 194 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms