RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 MRPL12P52815 198 aaKnown RBP19.78■□□□□ 0.76
HDAC7-227ENST00000548080 BLIDQ8IZY5 108 aa19.78■□□□□ 0.76
HDAC7-227ENST00000548080 DAGLBQ8NCG7 672 aa19.78■□□□□ 0.76
HDAC7-227ENST00000548080 COPS5Q92905 334 aa19.78■□□□□ 0.76
HDAC7-227ENST00000548080 IWS1Q96ST2 819 aa19.78■□□□□ 0.76
HDAC7-227ENST00000548080 WDR11Q9BZH6 1224 aa19.78■□□□□ 0.76
HDAC7-227ENST00000548080 ZMYND12Q9H0C1 365 aa19.78■□□□□ 0.76
HDAC7-227ENST00000548080 RTEL1Q9NZ71 1219 aa19.78■□□□□ 0.76
HDAC7-227ENST00000548080 RCOR1Q9UKL0 485 aa19.78■□□□□ 0.76
HDAC7-227ENST00000548080 PCDHA4Q9UN74 947 aa19.78■□□□□ 0.76
HDAC7-227ENST00000548080 ELP1O95163 1332 aa19.77■□□□□ 0.76
HDAC7-227ENST00000548080 FRMPD4Q14CM0 1322 aa19.77■□□□□ 0.76
HDAC7-227ENST00000548080 LOC102724159A0A0B4J2E5 919 aa19.77■□□□□ 0.76
HDAC7-227ENST00000548080 ESYT2A0FGR8 921 aa19.77■□□□□ 0.76
HDAC7-227ENST00000548080 SPDYE3A6NKU9 549 aa19.77■□□□□ 0.76
HDAC7-227ENST00000548080 B4DLN1 442 aa19.77■□□□□ 0.76
HDAC7-227ENST00000548080 SORBS3O60504 671 aa19.77■□□□□ 0.76
HDAC7-227ENST00000548080 RGS20O76081 388 aa19.77■□□□□ 0.76
HDAC7-227ENST00000548080 CEBPZQ03701 1054 aaKnown RBP19.77■□□□□ 0.76
HDAC7-227ENST00000548080 PWP2Q15269 919 aaKnown RBP19.77■□□□□ 0.76
HDAC7-227ENST00000548080 LRRC41Q15345 812 aa19.77■□□□□ 0.76
HDAC7-227ENST00000548080 PAWRQ96IZ0 340 aaKnown RBP19.77■□□□□ 0.76
HDAC7-227ENST00000548080 C6orf50Q9HD87 102 aa19.77■□□□□ 0.76
HDAC7-227ENST00000548080 GNA11P29992 359 aa19.76■□□□□ 0.75
HDAC7-227ENST00000548080 MRPS9P82933 396 aaKnown RBP19.76■□□□□ 0.75
HDAC7-227ENST00000548080 BEX3Q00994 111 aa19.76■□□□□ 0.75
HDAC7-227ENST00000548080 VSIG10LQ86VR7 867 aa19.76■□□□□ 0.75
HDAC7-227ENST00000548080 TNFRSF25Q93038 417 aa19.76■□□□□ 0.75
HDAC7-227ENST00000548080 ANP32EQ9BTT0 268 aa19.76■□□□□ 0.75
HDAC7-227ENST00000548080 ANO3Q9BYT9 981 aa19.76■□□□□ 0.75
HDAC7-227ENST00000548080 FTOQ9C0B1 505 aaKnown RBP eCLIP19.76■□□□□ 0.75
HDAC7-227ENST00000548080 POLR3EQ9NVU0 708 aa19.76■□□□□ 0.75
HDAC7-227ENST00000548080 DYNC1LI2O43237 492 aaPredicted RBP19.75■□□□□ 0.75
HDAC7-227ENST00000548080 GADD45BO75293 160 aaPredicted RBP19.75■□□□□ 0.75
HDAC7-227ENST00000548080 DUSP11O75319 330 aaKnown RBP19.75■□□□□ 0.75
HDAC7-227ENST00000548080 C6orf222P0C671 652 aaPredicted RBP19.75■□□□□ 0.75
HDAC7-227ENST00000548080 NASPP49321 788 aaPredicted RBP19.75■□□□□ 0.75
HDAC7-227ENST00000548080 CLK2P49760 499 aaKnown RBP19.75■□□□□ 0.75
HDAC7-227ENST00000548080 LY6KQ17RY6 165 aa19.75■□□□□ 0.75
HDAC7-227ENST00000548080 RILPL1Q5EBL4 403 aa19.75■□□□□ 0.75
HDAC7-227ENST00000548080 TLK2Q86UE8 772 aa19.75■□□□□ 0.75
HDAC7-227ENST00000548080 GNEQ9Y223 722 aaKnown RBP19.75■□□□□ 0.75
HDAC7-227ENST00000548080 DOCK5Q9H7D0 1870 aa19.75■□□□□ 0.75
HDAC7-227ENST00000548080 RBM47A0AV96 593 aaKnown RBP19.74■□□□□ 0.75
HDAC7-227ENST00000548080 ADAMTS4O75173 837 aa19.74■□□□□ 0.75
HDAC7-227ENST00000548080 EIF3JO75822 258 aaKnown RBP19.74■□□□□ 0.75
HDAC7-227ENST00000548080 TXNP10599 105 aaKnown RBP19.74■□□□□ 0.75
HDAC7-227ENST00000548080 UBE2HP62256 183 aa19.74■□□□□ 0.75
HDAC7-227ENST00000548080 IQSEC1Q6DN90 963 aa19.74■□□□□ 0.75
HDAC7-227ENST00000548080 BICD2Q8TD16 824 aa19.74■□□□□ 0.75
HDAC7-227ENST00000548080 SCFD2Q8WU76 684 aa19.74■□□□□ 0.75
HDAC7-227ENST00000548080 FERMT2Q96AC1 680 aa19.74■□□□□ 0.75
HDAC7-227ENST00000548080 CLIC4Q9Y696 253 aa19.74■□□□□ 0.75
HDAC7-227ENST00000548080 MYH7BA7E2Y1 1941 aa19.74■□□□□ 0.75
HDAC7-227ENST00000548080 M0R2N6 131 aa19.73■□□□□ 0.75
HDAC7-227ENST00000548080 YEATS4O95619 227 aa19.73■□□□□ 0.75
HDAC7-227ENST00000548080 MBD3O95983 291 aa19.73■□□□□ 0.75
HDAC7-227ENST00000548080 STK38Q15208 465 aa19.73■□□□□ 0.75
HDAC7-227ENST00000548080 DUSP28Q4G0W2 176 aa19.73■□□□□ 0.75
HDAC7-227ENST00000548080 UBE2Q1Q7Z7E8 422 aa19.73■□□□□ 0.75
HDAC7-227ENST00000548080 REXO1Q8N1G1 1221 aaKnown RBP19.73■□□□□ 0.75
HDAC7-227ENST00000548080 NOL7Q9UMY1 257 aaKnown RBP19.73■□□□□ 0.75
HDAC7-227ENST00000548080 MRVI1Q9Y6F6 885 aa19.73■□□□□ 0.75
HDAC7-227ENST00000548080 KBTBD13C9JR72 458 aa19.73■□□□□ 0.75
HDAC7-227ENST00000548080 RGS19P49795 217 aa19.73■□□□□ 0.75
HDAC7-227ENST00000548080 TOB1P50616 345 aaPredicted RBP19.73■□□□□ 0.75
HDAC7-227ENST00000548080 TTLL4Q14679 1199 aa19.73■□□□□ 0.75
HDAC7-227ENST00000548080 KLHL40Q2TBA0 621 aa19.73■□□□□ 0.75
HDAC7-227ENST00000548080 EARS2Q5JPH6 523 aaKnown RBP19.73■□□□□ 0.75
HDAC7-227ENST00000548080 PCNX4Q63HM2 1172 aa19.73■□□□□ 0.75
HDAC7-227ENST00000548080 ANKLE1Q8NAG6 615 aa19.73■□□□□ 0.75
HDAC7-227ENST00000548080 LINC00301Q8NCQ3 95 aa19.73■□□□□ 0.75
HDAC7-227ENST00000548080 ARRDC4Q8NCT1 418 aa19.73■□□□□ 0.75
HDAC7-227ENST00000548080 ALPK3Q96L96 1907 aa19.72■□□□□ 0.75
HDAC7-227ENST00000548080 CTAGE5O15320 804 aa19.72■□□□□ 0.75
HDAC7-227ENST00000548080 GJA9P57773 515 aa19.72■□□□□ 0.75
HDAC7-227ENST00000548080 SEMA3FQ13275 785 aa19.72■□□□□ 0.75
HDAC7-227ENST00000548080 SLC39A14Q15043 492 aa19.72■□□□□ 0.75
HDAC7-227ENST00000548080 CCDC62Q6P9F0 684 aa19.72■□□□□ 0.75
HDAC7-227ENST00000548080 RNF180Q86T96 592 aa19.72■□□□□ 0.75
HDAC7-227ENST00000548080 OR6J1Q8NGC5 347 aa19.72■□□□□ 0.75
HDAC7-227ENST00000548080 GPT2Q8TD30 523 aa19.72■□□□□ 0.75
HDAC7-227ENST00000548080 KCNG4Q8TDN1 519 aa19.72■□□□□ 0.75
HDAC7-227ENST00000548080 SENP6Q9GZR1 1112 aaPredicted RBP19.72■□□□□ 0.75
HDAC7-227ENST00000548080 AP5M1Q9H0R1 490 aa19.72■□□□□ 0.75
HDAC7-227ENST00000548080 GLT8D2Q9H1C3 349 aa19.72■□□□□ 0.75
HDAC7-227ENST00000548080 UPF3AQ9H1J1 476 aaKnown RBP19.72■□□□□ 0.75
HDAC7-227ENST00000548080 C11orf49Q9H6J7 331 aa19.72■□□□□ 0.75
HDAC7-227ENST00000548080 BCAS3Q9H6U6 928 aa19.72■□□□□ 0.75
HDAC7-227ENST00000548080 CCDC194A0A1B0GVG4 234 aa19.71■□□□□ 0.75
HDAC7-227ENST00000548080 GOLGA6L4A6NEF3 574 aa19.71■□□□□ 0.75
HDAC7-227ENST00000548080 FAM205CA6NFA0 338 aa19.71■□□□□ 0.75
HDAC7-227ENST00000548080 TNRC18O15417 2968 aaPredicted RBP19.71■□□□□ 0.75
HDAC7-227ENST00000548080 FOSP01100 380 aaPredicted RBP19.71■□□□□ 0.75
HDAC7-227ENST00000548080 AP3B2Q13367 1082 aa19.71■□□□□ 0.75
HDAC7-227ENST00000548080 SF3A1Q15459 793 aaKnown RBP19.71■□□□□ 0.75
HDAC7-227ENST00000548080 KCNA10Q16322 511 aa19.71■□□□□ 0.75
HDAC7-227ENST00000548080 GNASQ5JWF2 1037 aa19.71■□□□□ 0.75
HDAC7-227ENST00000548080 PIK3AP1Q6ZUJ8 805 aa19.71■□□□□ 0.75
HDAC7-227ENST00000548080 NECAB2Q7Z6G3 386 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms