RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 IL23AQ9NPF7 189 aa7.79□□□□□ -1.16
SCAF11-211ENST00000547950 PARP14Q460N5 1801 aa7.78□□□□□ -1.16
SCAF11-211ENST00000547950 LAMA3Q16787 3333 aa7.78□□□□□ -1.16
SCAF11-211ENST00000547950 ZBTB5O15062 677 aa7.78□□□□□ -1.16
SCAF11-211ENST00000547950 SORBS3O60504 671 aa7.78□□□□□ -1.16
SCAF11-211ENST00000547950 EIF3JO75822 258 aaKnown RBP7.78□□□□□ -1.16
SCAF11-211ENST00000547950 GH1P01241 217 aa7.78□□□□□ -1.16
SCAF11-211ENST00000547950 NR3C2P08235 984 aa7.78□□□□□ -1.16
SCAF11-211ENST00000547950 DNAJB2P25686 324 aa7.78□□□□□ -1.16
SCAF11-211ENST00000547950 HOXA13P31271 388 aaPredicted RBP7.78□□□□□ -1.16
SCAF11-211ENST00000547950 NBR1Q14596 966 aa7.78□□□□□ -1.16
SCAF11-211ENST00000547950 GRM4Q14833 912 aa7.78□□□□□ -1.16
SCAF11-211ENST00000547950 CCDC62Q6P9F0 684 aa7.78□□□□□ -1.16
SCAF11-211ENST00000547950 PSRC1Q6PGN9 363 aaPredicted RBP7.78□□□□□ -1.16
SCAF11-211ENST00000547950 STOX1Q6ZVD7 989 aa7.78□□□□□ -1.16
SCAF11-211ENST00000547950 DEFB128Q7Z7B8 93 aa7.78□□□□□ -1.16
SCAF11-211ENST00000547950 CATIPQ7Z7H3 387 aa7.78□□□□□ -1.16
SCAF11-211ENST00000547950 FCHSD1Q86WN1 690 aa7.78□□□□□ -1.16
SCAF11-211ENST00000547950 MYLIPQ8WY64 445 aa7.78□□□□□ -1.16
SCAF11-211ENST00000547950 TIFAQ96CG3 184 aa7.78□□□□□ -1.16
SCAF11-211ENST00000547950 MTMR8Q96EF0 704 aa7.78□□□□□ -1.16
SCAF11-211ENST00000547950 SCLYQ96I15 445 aa7.78□□□□□ -1.16
SCAF11-211ENST00000547950 MAF1Q9H063 256 aa7.78□□□□□ -1.16
SCAF11-211ENST00000547950 PXMP2Q9NR77 195 aa7.78□□□□□ -1.16
SCAF11-211ENST00000547950 WDR70Q9NW82 654 aa7.78□□□□□ -1.16
SCAF11-211ENST00000547950 SEPT9Q9UHD8 586 aaPredicted RBP7.78□□□□□ -1.16
SCAF11-211ENST00000547950 NOD1Q9Y239 953 aa7.78□□□□□ -1.16
SCAF11-211ENST00000547950 RBM8AQ9Y5S9 174 aaKnown RBP7.78□□□□□ -1.16
SCAF11-211ENST00000547950 MRVI1Q9Y6F6 885 aa7.78□□□□□ -1.16
SCAF11-211ENST00000547950 PNMA6FA0A0J9YX94 578 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 GCOM1H8Y6P7 765 aaPredicted RBP7.77□□□□□ -1.17
SCAF11-211ENST00000547950 OPLAHO14841 1288 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 MAP3K7O43318 606 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 CYTH3O43739 400 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 POLR2MP0CAP2 368 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 FOSL2P15408 326 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 CASTP20810 708 aaKnown RBP7.77□□□□□ -1.17
SCAF11-211ENST00000547950 HSD17B4P51659 736 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 ANTXR2P58335 489 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 TROAPQ12815 778 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 GRIN2CQ14957 1233 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 SLC35G1Q2M3R5 365 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 RASIP1Q5U651 963 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 NFRKBQ6P4R8 1299 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 NFXL1Q6ZNB6 911 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 SKAP1Q86WV1 359 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 DHX37Q8IY37 1157 aaKnown RBP7.77□□□□□ -1.17
SCAF11-211ENST00000547950 RPUSD2Q8IZ73 545 aaKnown RBP7.77□□□□□ -1.17
SCAF11-211ENST00000547950 RETREG2Q8NC44 543 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 MAFAQ8NHW3 353 aaPredicted RBP7.77□□□□□ -1.17
SCAF11-211ENST00000547950 IGDCC4Q8TDY8 1250 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 HERVK_113Q902F9 699 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 MYL10Q9BUA6 226 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 WNT8AQ9H1J5 351 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 MTIF3Q9H2K0 278 aaKnown RBP7.77□□□□□ -1.17
SCAF11-211ENST00000547950 ZNF576Q9H609 170 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 RIOX1Q9H6W3 641 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 CXXC1Q9P0U4 656 aaPredicted RBP7.77□□□□□ -1.17
SCAF11-211ENST00000547950 MSRAQ9UJ68 235 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 DDX41Q9UJV9 622 aaKnown RBP7.77□□□□□ -1.17
SCAF11-211ENST00000547950 SMCHD1A6NHR9 2005 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 MYH4Q9Y623 1939 aa7.77□□□□□ -1.17
SCAF11-211ENST00000547950 ZNFX1Q9P2E3 1918 aaKnown RBP7.76□□□□□ -1.17
SCAF11-211ENST00000547950 ZBBXA8MT70 800 aa7.76□□□□□ -1.17
SCAF11-211ENST00000547950 PRC1O43663 620 aa7.76□□□□□ -1.17
SCAF11-211ENST00000547950 MMP3P08254 477 aa7.76□□□□□ -1.17
SCAF11-211ENST00000547950 MCM5P33992 734 aa7.76□□□□□ -1.17
SCAF11-211ENST00000547950 RABGGTBP53611 331 aa7.76□□□□□ -1.17
SCAF11-211ENST00000547950 ARHGAP1Q07960 439 aa7.76□□□□□ -1.17
SCAF11-211ENST00000547950 TRAF1Q13077 416 aa7.76□□□□□ -1.17
SCAF11-211ENST00000547950 LAMC2Q13753 1193 aa7.76□□□□□ -1.17
SCAF11-211ENST00000547950 PTGISQ16647 500 aa7.76□□□□□ -1.17
SCAF11-211ENST00000547950 DGKDQ16760 1214 aa7.76□□□□□ -1.17
SCAF11-211ENST00000547950 CASC1Q6TDU7 716 aa7.76□□□□□ -1.17
SCAF11-211ENST00000547950 VSIG10LQ86VR7 867 aa7.76□□□□□ -1.17
SCAF11-211ENST00000547950 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.76□□□□□ -1.17
SCAF11-211ENST00000547950 MB21D2Q8IYB1 491 aaPredicted RBP7.76□□□□□ -1.17
SCAF11-211ENST00000547950 CTCFLQ8NI51 663 aaPredicted RBP7.76□□□□□ -1.17
SCAF11-211ENST00000547950 PDCD2LQ9BRP1 358 aa7.76□□□□□ -1.17
SCAF11-211ENST00000547950 ESYT1Q9BSJ8 1104 aa7.76□□□□□ -1.17
SCAF11-211ENST00000547950 ALG1Q9BT22 464 aa7.76□□□□□ -1.17
SCAF11-211ENST00000547950 PBX4Q9BYU1 374 aa7.76□□□□□ -1.17
SCAF11-211ENST00000547950 FTOQ9C0B1 505 aaKnown RBP eCLIP7.76□□□□□ -1.17
SCAF11-211ENST00000547950 LSG1Q9H089 658 aaKnown RBP7.76□□□□□ -1.17
SCAF11-211ENST00000547950 ANO2Q9NQ90 1003 aa7.76□□□□□ -1.17
SCAF11-211ENST00000547950 MAP3K20Q9NYL2 800 aaKnown RBP7.76□□□□□ -1.17
SCAF11-211ENST00000547950 SLC4A7Q9Y6M7 1214 aa7.76□□□□□ -1.17
SCAF11-211ENST00000547950 FRMPD3Q5JV73 1810 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 TMEM265A0A087WTH1 108 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 CCDC69A6NI79 296 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 SLC27A2O14975 620 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 RGS20O76081 388 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 IQCF3P0C7M6 154 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 CCND2P30279 289 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 KIF5BP33176 963 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 PTPN11Q06124 597 aaPredicted RBP7.75□□□□□ -1.17
SCAF11-211ENST00000547950 BFSP2Q13515 415 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 COL9A3Q14050 684 aaPredicted RBP7.75□□□□□ -1.17
SCAF11-211ENST00000547950 PGM5Q15124 567 aa7.75□□□□□ -1.17
SCAF11-211ENST00000547950 E2F4Q16254 413 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms