RNA–Protein interactions for RNA: ENST00000547533.1

AC055716.3-201, humanhuman

TSL 3 BASIC

Gene AC055716.3, Length 761 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.3-201ENST00000547533 TRDNQ13061 729 aa10.6□□□□□ -0.71
AC055716.3-201ENST00000547533 HDAC1Q13547 482 aaPredicted RBP10.6□□□□□ -0.71
AC055716.3-201ENST00000547533 AAMPQ13685 434 aa10.6□□□□□ -0.71
AC055716.3-201ENST00000547533 GNPTABQ3T906 1256 aa10.6□□□□□ -0.71
AC055716.3-201ENST00000547533 TIGD5Q53EQ6 642 aa10.6□□□□□ -0.71
AC055716.3-201ENST00000547533 IFIT1BQ5T764 474 aaKnown RBP10.6□□□□□ -0.71
AC055716.3-201ENST00000547533 KRT40Q6A162 431 aa10.6□□□□□ -0.71
AC055716.3-201ENST00000547533 FAM117BQ6P1L5 589 aa10.6□□□□□ -0.71
AC055716.3-201ENST00000547533 ZNF589Q86UQ0 364 aaPredicted RBP10.6□□□□□ -0.71
AC055716.3-201ENST00000547533 TBC1D10CQ8IV04 446 aa10.6□□□□□ -0.71
AC055716.3-201ENST00000547533 SEPT8Q92599 483 aa10.6□□□□□ -0.71
AC055716.3-201ENST00000547533 KAT2BQ92831 832 aa10.6□□□□□ -0.71
AC055716.3-201ENST00000547533 SPATA33Q96N06 139 aa10.6□□□□□ -0.71
AC055716.3-201ENST00000547533 RWDD1Q9H446 243 aaPredicted RBP10.6□□□□□ -0.71
AC055716.3-201ENST00000547533 EPHX3Q9H6B9 360 aa10.6□□□□□ -0.71
AC055716.3-201ENST00000547533 UBE2ZQ9H832 354 aaPredicted RBP10.6□□□□□ -0.71
AC055716.3-201ENST00000547533 MLXIPQ9HAP2 919 aa10.6□□□□□ -0.71
AC055716.3-201ENST00000547533 REV3LO60673 3130 aa10.6□□□□□ -0.71
AC055716.3-201ENST00000547533 NEDD4P46934 1319 aa10.59□□□□□ -0.71
AC055716.3-201ENST00000547533 ERICH2A1L162 156 aa10.59□□□□□ -0.71
AC055716.3-201ENST00000547533 C17orf102A2RUQ5 167 aa10.59□□□□□ -0.71
AC055716.3-201ENST00000547533 LCHNA4D1U4 455 aa10.59□□□□□ -0.71
AC055716.3-201ENST00000547533 LINC01553A4QN01 128 aa10.59□□□□□ -0.71
AC055716.3-201ENST00000547533 LPXNO60711 386 aa10.59□□□□□ -0.71
AC055716.3-201ENST00000547533 NBNO60934 754 aa10.59□□□□□ -0.71
AC055716.3-201ENST00000547533 CAND2O75155 1236 aa10.59□□□□□ -0.71
AC055716.3-201ENST00000547533 SDSP20132 328 aa10.59□□□□□ -0.71
AC055716.3-201ENST00000547533 CCND2P30279 289 aa10.59□□□□□ -0.71
AC055716.3-201ENST00000547533 DEFB103AP81534 67 aa10.59□□□□□ -0.71
AC055716.3-201ENST00000547533 LEXMQ3ZCV2 418 aa10.59□□□□□ -0.71
AC055716.3-201ENST00000547533 ZNF618Q5T7W0 954 aa10.59□□□□□ -0.71
AC055716.3-201ENST00000547533 CWC27Q6UX04 472 aaKnown RBP10.59□□□□□ -0.71
AC055716.3-201ENST00000547533 MYOCDQ8IZQ8 938 aa10.59□□□□□ -0.71
AC055716.3-201ENST00000547533 ANKS1AQ92625 1134 aa10.59□□□□□ -0.71
AC055716.3-201ENST00000547533 ATP6V0A1Q93050 837 aa10.59□□□□□ -0.71
AC055716.3-201ENST00000547533 YME1L1Q96TA2 773 aa10.59□□□□□ -0.71
AC055716.3-201ENST00000547533 CPVLQ9H3G5 476 aa10.59□□□□□ -0.71
AC055716.3-201ENST00000547533 SUGCTQ9HAC7 445 aa10.59□□□□□ -0.71
AC055716.3-201ENST00000547533 ZNF215Q9UL58 517 aaPredicted RBP10.59□□□□□ -0.71
AC055716.3-201ENST00000547533 PCDHA1Q9Y5I3 950 aa10.59□□□□□ -0.71
AC055716.3-201ENST00000547533 B4E1Z4 1266 aa10.58□□□□□ -0.72
AC055716.3-201ENST00000547533 GCOM1H8Y6P7 765 aaPredicted RBP10.58□□□□□ -0.72
AC055716.3-201ENST00000547533 NCK2O43639 380 aa10.58□□□□□ -0.72
AC055716.3-201ENST00000547533 STAM2O75886 525 aa10.58□□□□□ -0.72
AC055716.3-201ENST00000547533 GGPS1O95749 300 aa10.58□□□□□ -0.72
AC055716.3-201ENST00000547533 POLR2MP0CAP2 368 aa10.58□□□□□ -0.72
AC055716.3-201ENST00000547533 KCNA5P22460 613 aa10.58□□□□□ -0.72
AC055716.3-201ENST00000547533 HSD17B4P51659 736 aa10.58□□□□□ -0.72
AC055716.3-201ENST00000547533 SART3Q15020 963 aaKnown RBP10.58□□□□□ -0.72
AC055716.3-201ENST00000547533 CELF3Q5SZQ8 465 aaKnown RBP10.58□□□□□ -0.72
AC055716.3-201ENST00000547533 MYSM1Q5VVJ2 828 aa10.58□□□□□ -0.72
AC055716.3-201ENST00000547533 PTCRAQ6ISU1 281 aaPredicted RBP10.58□□□□□ -0.72
AC055716.3-201ENST00000547533 TMCO2Q7Z6W1 182 aaPredicted RBP10.58□□□□□ -0.72
AC055716.3-201ENST00000547533 GJD3Q8N144 294 aa10.58□□□□□ -0.72
AC055716.3-201ENST00000547533 DHX38Q92620 1227 aaKnown RBP10.58□□□□□ -0.72
AC055716.3-201ENST00000547533 APBB2Q92870 758 aa10.58□□□□□ -0.72
AC055716.3-201ENST00000547533 DSCC1Q9BVC3 393 aa10.58□□□□□ -0.72
AC055716.3-201ENST00000547533 LNPKQ9C0E8 428 aa10.58□□□□□ -0.72
AC055716.3-201ENST00000547533 JMJD4Q9H9V9 463 aa10.58□□□□□ -0.72
AC055716.3-201ENST00000547533 XIRP2A4UGR9 3374 aa10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 PRR33A8MZF0 331 aa10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 PI4K2BG5E9Z4 385 aa10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 H3BRB1 525 aa10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 HAS3O00219 553 aa10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 ZBTB5O15062 677 aa10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 HOXD11P31277 338 aaPredicted RBP10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 RRP1P56182 461 aaKnown RBP10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 NEDD9Q14511 834 aa10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 PGM5Q15124 567 aa10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 EP400NLQ6ZTU2 488 aa10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 STOX1Q6ZVD7 989 aa10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 RSPH3Q86UC2 560 aa10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 SERINC5Q86VE9 423 aa10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 ENAHQ8N8S7 591 aaPredicted RBP10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 TBC1D5Q92609 795 aa10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 MRPL38Q96DV4 380 aaKnown RBP10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 UIMC1Q96RL1 719 aa10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 PDCD2LQ9BRP1 358 aa10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 USP26Q9BXU7 913 aa10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 TUT1Q9H6E5 874 aaKnown RBP10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 ZSWIM5Q9P217 1185 aa10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 COL20A1Q9P218 1284 aa10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 RWDD3Q9Y3V2 267 aa10.57□□□□□ -0.72
AC055716.3-201ENST00000547533 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.56□□□□□ -0.72
AC055716.3-201ENST00000547533 KLRF2D3W0D1 207 aa10.56□□□□□ -0.72
AC055716.3-201ENST00000547533 ARHGEF15O94989 841 aa10.56□□□□□ -0.72
AC055716.3-201ENST00000547533 HOXD8P13378 290 aaPredicted RBP10.56□□□□□ -0.72
AC055716.3-201ENST00000547533 GPM6BQ13491 265 aa10.56□□□□□ -0.72
AC055716.3-201ENST00000547533 VSIG10LQ86VR7 867 aa10.56□□□□□ -0.72
AC055716.3-201ENST00000547533 HOMER1Q86YM7 354 aa10.56□□□□□ -0.72
AC055716.3-201ENST00000547533 FAM178BQ8IXR5 827 aa10.56□□□□□ -0.72
AC055716.3-201ENST00000547533 GIMAP8Q8ND71 665 aaPredicted RBP10.56□□□□□ -0.72
AC055716.3-201ENST00000547533 BANK1Q8NDB2 785 aa10.56□□□□□ -0.72
AC055716.3-201ENST00000547533 DBF4BQ8NFT6 615 aa10.56□□□□□ -0.72
AC055716.3-201ENST00000547533 CUL5Q93034 780 aa10.56□□□□□ -0.72
AC055716.3-201ENST00000547533 PPP2R3CQ969Q6 453 aa10.56□□□□□ -0.72
AC055716.3-201ENST00000547533 CTAGE1Q96RT6 745 aa10.56□□□□□ -0.72
AC055716.3-201ENST00000547533 IFIH1Q9BYX4 1025 aaKnown RBP10.56□□□□□ -0.72
AC055716.3-201ENST00000547533 UPF3BQ9BZI7 483 aaKnown RBP10.56□□□□□ -0.72
AC055716.3-201ENST00000547533 SORBS3O60504 671 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms