RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 BFSP2Q13515 415 aa15.43■□□□□ 0.06
CPSF6-204ENST00000547486 ADGRE1Q14246 886 aa15.43■□□□□ 0.06
CPSF6-204ENST00000547486 MFSD10Q14728 455 aa15.43■□□□□ 0.06
CPSF6-204ENST00000547486 KIAA0753Q2KHM9 967 aa15.43■□□□□ 0.06
CPSF6-204ENST00000547486 KCNV1Q6PIU1 500 aa15.43■□□□□ 0.06
CPSF6-204ENST00000547486 USP17L6PQ6QN14 398 aa15.43■□□□□ 0.06
CPSF6-204ENST00000547486 NFXL1Q6ZNB6 911 aa15.43■□□□□ 0.06
CPSF6-204ENST00000547486 RAB11FIP4Q86YS3 637 aa15.43■□□□□ 0.06
CPSF6-204ENST00000547486 TMTC2Q8N394 836 aa15.43■□□□□ 0.06
CPSF6-204ENST00000547486 CTCFLQ8NI51 663 aaPredicted RBP15.43■□□□□ 0.06
CPSF6-204ENST00000547486 RRP36Q96EU6 259 aaKnown RBP15.43■□□□□ 0.06
CPSF6-204ENST00000547486 TMEM87BQ96K49 555 aa15.43■□□□□ 0.06
CPSF6-204ENST00000547486 SPATA33Q96N06 139 aa15.43■□□□□ 0.06
CPSF6-204ENST00000547486 LRRC2Q9BYS8 371 aa15.43■□□□□ 0.06
CPSF6-204ENST00000547486 ANO2Q9NQ90 1003 aa15.43■□□□□ 0.06
CPSF6-204ENST00000547486 RTEL1Q9NZ71 1219 aa15.43■□□□□ 0.06
CPSF6-204ENST00000547486 FRMPD4Q14CM0 1322 aa15.43■□□□□ 0.06
CPSF6-204ENST00000547486 BAZ2BQ9UIF8 2168 aaKnown RBP15.42■□□□□ 0.06
CPSF6-204ENST00000547486 MEIS2O14770 477 aa15.42■□□□□ 0.06
CPSF6-204ENST00000547486 TGFB3P10600 412 aa15.42■□□□□ 0.06
CPSF6-204ENST00000547486 KIF5BP33176 963 aa15.42■□□□□ 0.06
CPSF6-204ENST00000547486 LIFRP42702 1097 aa15.42■□□□□ 0.06
CPSF6-204ENST00000547486 SEMA3FQ13275 785 aa15.42■□□□□ 0.06
CPSF6-204ENST00000547486 BMP2KLQ5H9B9 411 aa15.42■□□□□ 0.06
CPSF6-204ENST00000547486 C7orf31Q8N865 590 aa15.42■□□□□ 0.06
CPSF6-204ENST00000547486 WNT8BQ93098 351 aa15.42■□□□□ 0.06
CPSF6-204ENST00000547486 C16orf70Q9BSU1 422 aa15.42■□□□□ 0.06
CPSF6-204ENST00000547486 FTOQ9C0B1 505 aaKnown RBP eCLIP15.42■□□□□ 0.06
CPSF6-204ENST00000547486 SLC28A3Q9HAS3 691 aa15.42■□□□□ 0.06
CPSF6-204ENST00000547486 TELO2Q9Y4R8 837 aa15.42■□□□□ 0.06
CPSF6-204ENST00000547486 PCDHA11Q9Y5I1 949 aa15.42■□□□□ 0.06
CPSF6-204ENST00000547486 VCANP13611 3396 aa15.42■□□□□ 0.06
CPSF6-204ENST00000547486 CHD7Q9P2D1 2997 aa15.41■□□□□ 0.06
CPSF6-204ENST00000547486 hCG_1642624A0A1W2PR95 340 aa15.41■□□□□ 0.06
CPSF6-204ENST00000547486 CCDC69A6NI79 296 aa15.41■□□□□ 0.06
CPSF6-204ENST00000547486 SPATA31C2B4DYI2 1134 aa15.41■□□□□ 0.06
CPSF6-204ENST00000547486 TCTN1Q2MV58 587 aa15.41■□□□□ 0.06
CPSF6-204ENST00000547486 TRIM71Q2Q1W2 868 aaKnown RBP15.41■□□□□ 0.06
CPSF6-204ENST00000547486 CENPQQ7L2Z9 268 aaPredicted RBP15.41■□□□□ 0.06
CPSF6-204ENST00000547486 AFAP1L1Q8TED9 768 aa15.41■□□□□ 0.06
CPSF6-204ENST00000547486 LZTS2Q9BRK4 669 aa15.41■□□□□ 0.06
CPSF6-204ENST00000547486 MLXIPQ9HAP2 919 aa15.41■□□□□ 0.06
CPSF6-204ENST00000547486 MYH6P13533 1939 aa15.41■□□□□ 0.06
CPSF6-204ENST00000547486 NBNO60934 754 aa15.4■□□□□ 0.06
CPSF6-204ENST00000547486 CKBP12277 381 aa15.4■□□□□ 0.06
CPSF6-204ENST00000547486 ACTN1P12814 892 aa15.4■□□□□ 0.06
CPSF6-204ENST00000547486 SELPP16109 830 aa15.4■□□□□ 0.06
CPSF6-204ENST00000547486 ICAM3P32942 547 aa15.4■□□□□ 0.06
CPSF6-204ENST00000547486 RBL2Q08999 1139 aa15.4■□□□□ 0.06
CPSF6-204ENST00000547486 TRAF7Q6Q0C0 670 aa15.4■□□□□ 0.06
CPSF6-204ENST00000547486 LRRC8DQ7L1W4 858 aa15.4■□□□□ 0.06
CPSF6-204ENST00000547486 CCDC82Q8N4S0 544 aa15.4■□□□□ 0.06
CPSF6-204ENST00000547486 CAGE1Q8TC20 777 aa15.4■□□□□ 0.06
CPSF6-204ENST00000547486 INPP4AQ96PE3 977 aaPredicted RBP15.4■□□□□ 0.06
CPSF6-204ENST00000547486 KATNAL1Q9BW62 490 aa15.4■□□□□ 0.06
CPSF6-204ENST00000547486 PRDM6Q9NQX0 595 aa15.4■□□□□ 0.06
CPSF6-204ENST00000547486 SLC12A7Q9Y666 1083 aa15.4■□□□□ 0.06
CPSF6-204ENST00000547486 KIAA1217Q5T5P2 1943 aa15.4■□□□□ 0.06
CPSF6-204ENST00000547486 PIK3CDO00329 1044 aa15.39■□□□□ 0.05
CPSF6-204ENST00000547486 ARHGEF15O94989 841 aa15.39■□□□□ 0.05
CPSF6-204ENST00000547486 GNAQP50148 359 aa15.39■□□□□ 0.05
CPSF6-204ENST00000547486 PTK7Q13308 1070 aa15.39■□□□□ 0.05
CPSF6-204ENST00000547486 CYFIP1Q7L576 1253 aa15.39■□□□□ 0.05
CPSF6-204ENST00000547486 RASEFQ8IZ41 740 aa15.39■□□□□ 0.05
CPSF6-204ENST00000547486 CCDC155Q8N6L0 562 aa15.39■□□□□ 0.05
CPSF6-204ENST00000547486 FANCBQ8NB91 859 aa15.39■□□□□ 0.05
CPSF6-204ENST00000547486 SMARCC2Q8TAQ2 1214 aa15.39■□□□□ 0.05
CPSF6-204ENST00000547486 PPM1EQ8WY54 764 aa15.39■□□□□ 0.05
CPSF6-204ENST00000547486 GAS2L1Q99501 681 aaPredicted RBP15.39■□□□□ 0.05
CPSF6-204ENST00000547486 SEC63Q9UGP8 760 aaKnown RBP15.39■□□□□ 0.05
CPSF6-204ENST00000547486 SCN5AQ14524 2016 aa15.39■□□□□ 0.05
CPSF6-204ENST00000547486 H3BRB1 525 aa15.38■□□□□ 0.05
CPSF6-204ENST00000547486 STAM2O75886 525 aa15.38■□□□□ 0.05
CPSF6-204ENST00000547486 CXCL10P02778 98 aa15.38■□□□□ 0.05
CPSF6-204ENST00000547486 LGALS2P05162 132 aa15.38■□□□□ 0.05
CPSF6-204ENST00000547486 CA3P07451 260 aa15.38■□□□□ 0.05
CPSF6-204ENST00000547486 CALM1P0DP23 149 aa15.38■□□□□ 0.05
CPSF6-204ENST00000547486 CALM2P0DP24 149 aa15.38■□□□□ 0.05
CPSF6-204ENST00000547486 CALM3P0DP25 149 aa15.38■□□□□ 0.05
CPSF6-204ENST00000547486 IGFBP4P22692 258 aa15.38■□□□□ 0.05
CPSF6-204ENST00000547486 EXOSC10Q01780 885 aaKnown RBP15.38■□□□□ 0.05
CPSF6-204ENST00000547486 MBTPS1Q14703 1052 aa15.38■□□□□ 0.05
CPSF6-204ENST00000547486 ADCK5Q3MIX3 580 aa15.38■□□□□ 0.05
CPSF6-204ENST00000547486 GNPTABQ3T906 1256 aa15.38■□□□□ 0.05
CPSF6-204ENST00000547486 ZNF618Q5T7W0 954 aa15.38■□□□□ 0.05
CPSF6-204ENST00000547486 PCNX4Q63HM2 1172 aa15.38■□□□□ 0.05
CPSF6-204ENST00000547486 PPP2R2DQ66LE6 453 aa15.38■□□□□ 0.05
CPSF6-204ENST00000547486 TMTC3Q6ZXV5 915 aa15.38■□□□□ 0.05
CPSF6-204ENST00000547486 TMCO2Q7Z6W1 182 aaPredicted RBP15.38■□□□□ 0.05
CPSF6-204ENST00000547486 SGMS1Q86VZ5 419 aa15.38■□□□□ 0.05
CPSF6-204ENST00000547486 HERC6Q8IVU3 1022 aa15.38■□□□□ 0.05
CPSF6-204ENST00000547486 PHOSPHO2Q8TCD6 241 aa15.38■□□□□ 0.05
CPSF6-204ENST00000547486 CUL5Q93034 780 aa15.38■□□□□ 0.05
CPSF6-204ENST00000547486 TCEANC2Q96MN5 208 aa15.38■□□□□ 0.05
CPSF6-204ENST00000547486 GPR20Q99678 358 aa15.38■□□□□ 0.05
CPSF6-204ENST00000547486 TUT1Q9H6E5 874 aaKnown RBP15.38■□□□□ 0.05
CPSF6-204ENST00000547486 PSTPIP2Q9H939 334 aa15.38■□□□□ 0.05
CPSF6-204ENST00000547486 RFXAPO00287 272 aa15.37■□□□□ 0.05
CPSF6-204ENST00000547486 FIBPO43427 364 aa15.37■□□□□ 0.05
CPSF6-204ENST00000547486 ATP9AO75110 1047 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms