RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 RILPL1Q5EBL4 403 aa19.6■□□□□ 0.73
RBFOX1-207ENST00000547338 MAP3K14Q99558 947 aa19.6■□□□□ 0.73
RBFOX1-207ENST00000547338 MYL10Q9BUA6 226 aa19.6■□□□□ 0.73
RBFOX1-207ENST00000547338 RIOX1Q9H6W3 641 aa19.6■□□□□ 0.73
RBFOX1-207ENST00000547338 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.59■□□□□ 0.73
RBFOX1-207ENST00000547338 MYADML2A6NDP7 307 aa19.59■□□□□ 0.73
RBFOX1-207ENST00000547338 PRPF3O43395 683 aaKnown RBP19.59■□□□□ 0.73
RBFOX1-207ENST00000547338 CUTAO60888 179 aa19.59■□□□□ 0.73
RBFOX1-207ENST00000547338 MMP1P03956 469 aa19.59■□□□□ 0.73
RBFOX1-207ENST00000547338 TERF1P54274 439 aa19.59■□□□□ 0.73
RBFOX1-207ENST00000547338 TMEM63BQ5T3F8 832 aa19.59■□□□□ 0.73
RBFOX1-207ENST00000547338 CCSAPQ6IQ19 270 aaPredicted RBP19.59■□□□□ 0.73
RBFOX1-207ENST00000547338 C7orf61Q8IZ16 206 aa19.59■□□□□ 0.73
RBFOX1-207ENST00000547338 ARRDC4Q8NCT1 418 aa19.59■□□□□ 0.73
RBFOX1-207ENST00000547338 PHKBQ93100 1093 aa19.59■□□□□ 0.73
RBFOX1-207ENST00000547338 SENP6Q9GZR1 1112 aaPredicted RBP19.59■□□□□ 0.73
RBFOX1-207ENST00000547338 GOLPH3LQ9H4A5 285 aa19.59■□□□□ 0.73
RBFOX1-207ENST00000547338 CBX8Q9HC52 389 aa19.59■□□□□ 0.73
RBFOX1-207ENST00000547338 COL20A1Q9P218 1284 aa19.59■□□□□ 0.73
RBFOX1-207ENST00000547338 PNMA2Q9UL42 364 aa19.59■□□□□ 0.73
RBFOX1-207ENST00000547338 FAM184BQ9ULE4 1060 aa19.59■□□□□ 0.73
RBFOX1-207ENST00000547338 CEP131Q9UPN4 1083 aa19.59■□□□□ 0.73
RBFOX1-207ENST00000547338 ASB14A6NK59 587 aa19.58■□□□□ 0.73
RBFOX1-207ENST00000547338 KIF28PB7ZC32 967 aa19.58■□□□□ 0.73
RBFOX1-207ENST00000547338 ALDH5A1P51649 535 aaPredicted RBP19.58■□□□□ 0.73
RBFOX1-207ENST00000547338 AXDND1Q5T1B0 1012 aaPredicted RBP19.58■□□□□ 0.73
RBFOX1-207ENST00000547338 TAPT1Q6NXT6 567 aa19.58■□□□□ 0.73
RBFOX1-207ENST00000547338 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.58■□□□□ 0.73
RBFOX1-207ENST00000547338 RNF207Q6ZRF8 634 aa19.58■□□□□ 0.73
RBFOX1-207ENST00000547338 NOSTRINQ8IVI9 506 aa19.58■□□□□ 0.73
RBFOX1-207ENST00000547338 KLHDC9Q8NEP7 349 aa19.58■□□□□ 0.73
RBFOX1-207ENST00000547338 BPIFA3Q9BQP9 254 aa19.58■□□□□ 0.73
RBFOX1-207ENST00000547338 SDF4Q9BRK5 362 aa19.58■□□□□ 0.73
RBFOX1-207ENST00000547338 PRO3102Q9H379 93 aa19.58■□□□□ 0.73
RBFOX1-207ENST00000547338 PDGFCQ9NRA1 345 aa19.58■□□□□ 0.73
RBFOX1-207ENST00000547338 ABCB11O95342 1321 aa19.57■□□□□ 0.72
RBFOX1-207ENST00000547338 CALML3P27482 149 aa19.57■□□□□ 0.72
RBFOX1-207ENST00000547338 ADCYAP1R1P41586 468 aa19.57■□□□□ 0.72
RBFOX1-207ENST00000547338 ZRSR1Q15695 479 aaKnown RBP19.57■□□□□ 0.72
RBFOX1-207ENST00000547338 SARM1Q6SZW1 724 aa19.57■□□□□ 0.72
RBFOX1-207ENST00000547338 FBXO11Q86XK2 927 aa19.57■□□□□ 0.72
RBFOX1-207ENST00000547338 RAB11FIP4Q86YS3 637 aa19.57■□□□□ 0.72
RBFOX1-207ENST00000547338 FBXO16Q8IX29 292 aaPredicted RBP19.57■□□□□ 0.72
RBFOX1-207ENST00000547338 FAM177A1Q8N128 213 aaPredicted RBP19.57■□□□□ 0.72
RBFOX1-207ENST00000547338 UPF3AQ9H1J1 476 aaKnown RBP19.57■□□□□ 0.72
RBFOX1-207ENST00000547338 PHF24Q9UPV7 400 aa19.57■□□□□ 0.72
RBFOX1-207ENST00000547338 GOLGA6L19H0YKK7 550 aa19.56■□□□□ 0.72
RBFOX1-207ENST00000547338 ZBTB5O15062 677 aa19.56■□□□□ 0.72
RBFOX1-207ENST00000547338 DUSP11O75319 330 aaKnown RBP19.56■□□□□ 0.72
RBFOX1-207ENST00000547338 OFD1O75665 1012 aa19.56■□□□□ 0.72
RBFOX1-207ENST00000547338 BMP15O95972 392 aa19.56■□□□□ 0.72
RBFOX1-207ENST00000547338 EDNRBP24530 442 aa19.56■□□□□ 0.72
RBFOX1-207ENST00000547338 SNX17Q15036 470 aa19.56■□□□□ 0.72
RBFOX1-207ENST00000547338 PTPAQ15257 358 aa19.56■□□□□ 0.72
RBFOX1-207ENST00000547338 EEPD1Q7L9B9 569 aa19.56■□□□□ 0.72
RBFOX1-207ENST00000547338 PIGSQ96S52 555 aa19.56■□□□□ 0.72
RBFOX1-207ENST00000547338 FTOQ9C0B1 505 aaKnown RBP eCLIP19.56■□□□□ 0.72
RBFOX1-207ENST00000547338 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.56■□□□□ 0.72
RBFOX1-207ENST00000547338 COLQQ9Y215 455 aaPredicted RBP19.56■□□□□ 0.72
RBFOX1-207ENST00000547338 NR2E3Q9Y5X4 410 aa19.56■□□□□ 0.72
RBFOX1-207ENST00000547338 KBTBD13C9JR72 458 aa19.56■□□□□ 0.72
RBFOX1-207ENST00000547338 RXRAP19793 462 aa19.56■□□□□ 0.72
RBFOX1-207ENST00000547338 CDC25BP30305 580 aa19.56■□□□□ 0.72
RBFOX1-207ENST00000547338 ATN1P54259 1190 aaPredicted RBP19.56■□□□□ 0.72
RBFOX1-207ENST00000547338 ZNF579Q8NAF0 562 aaKnown RBP19.56■□□□□ 0.72
RBFOX1-207ENST00000547338 FERMT2Q96AC1 680 aa19.56■□□□□ 0.72
RBFOX1-207ENST00000547338 KIAA1468Q9P260 1216 aa19.56■□□□□ 0.72
RBFOX1-207ENST00000547338 HOOK1Q9UJC3 728 aaKnown RBP19.56■□□□□ 0.72
RBFOX1-207ENST00000547338 GNEQ9Y223 722 aaKnown RBP19.56■□□□□ 0.72
RBFOX1-207ENST00000547338 MYCNP04198 464 aaPredicted RBP19.55■□□□□ 0.72
RBFOX1-207ENST00000547338 SMPD1P17405 629 aa19.55■□□□□ 0.72
RBFOX1-207ENST00000547338 NKX3-2P78367 333 aa19.55■□□□□ 0.72
RBFOX1-207ENST00000547338 GHRHRQ02643 423 aa19.55■□□□□ 0.72
RBFOX1-207ENST00000547338 CEP57L1Q8IYX8 460 aa19.55■□□□□ 0.72
RBFOX1-207ENST00000547338 SYTL5Q8TDW5 730 aaPredicted RBP19.55■□□□□ 0.72
RBFOX1-207ENST00000547338 NUP133Q8WUM0 1156 aa19.55■□□□□ 0.72
RBFOX1-207ENST00000547338 ZMYND8Q9ULU4 1186 aaPredicted RBP19.55■□□□□ 0.72
RBFOX1-207ENST00000547338 HPSEQ9Y251 543 aa19.55■□□□□ 0.72
RBFOX1-207ENST00000547338 LOC102724159A0A0B4J2E5 919 aa19.54■□□□□ 0.72
RBFOX1-207ENST00000547338 PPFIA3O75145 1194 aa19.54■□□□□ 0.72
RBFOX1-207ENST00000547338 ZNF202O95125 648 aa19.54■□□□□ 0.72
RBFOX1-207ENST00000547338 PLEKHA8P1O95397 391 aa19.54■□□□□ 0.72
RBFOX1-207ENST00000547338 CST5P28325 142 aaPredicted RBP19.54■□□□□ 0.72
RBFOX1-207ENST00000547338 KIF5BP33176 963 aa19.54■□□□□ 0.72
RBFOX1-207ENST00000547338 NDUFA8P51970 172 aa19.54■□□□□ 0.72
RBFOX1-207ENST00000547338 GJA9P57773 515 aa19.54■□□□□ 0.72
RBFOX1-207ENST00000547338 DHX8Q14562 1220 aaKnown RBP19.54■□□□□ 0.72
RBFOX1-207ENST00000547338 IQCB1Q15051 598 aa19.54■□□□□ 0.72
RBFOX1-207ENST00000547338 PWP2Q15269 919 aaKnown RBP19.54■□□□□ 0.72
RBFOX1-207ENST00000547338 CHRDL2Q6WN34 429 aa19.54■□□□□ 0.72
RBFOX1-207ENST00000547338 SLC39A5Q6ZMH5 540 aa19.54■□□□□ 0.72
RBFOX1-207ENST00000547338 HOMER1Q86YM7 354 aa19.54■□□□□ 0.72
RBFOX1-207ENST00000547338 AMNQ9BXJ7 453 aa19.54■□□□□ 0.72
RBFOX1-207ENST00000547338 BRMS1Q9HCU9 246 aa19.54■□□□□ 0.72
RBFOX1-207ENST00000547338 VTA1Q9NP79 307 aa19.54■□□□□ 0.72
RBFOX1-207ENST00000547338 ADD3Q9UEY8 706 aaKnown RBP19.54■□□□□ 0.72
RBFOX1-207ENST00000547338 A0A1W2PQ45 241 aaPredicted RBP19.53■□□□□ 0.72
RBFOX1-207ENST00000547338 A0A1W2PQY0 241 aa19.53■□□□□ 0.72
RBFOX1-207ENST00000547338 SYN1P17600 705 aa19.53■□□□□ 0.72
RBFOX1-207ENST00000547338 GNAQP50148 359 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms