RNA–Protein interactions for RNA: ENST00000547281.5

CDK4-204, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-204ENST00000547281 SPZ1Q9BXG8 430 aa18.68■□□□□ 0.58
CDK4-204ENST00000547281 NKX2-4Q9H2Z4 354 aa18.68■□□□□ 0.58
CDK4-204ENST00000547281 HDAC6Q9UBN7 1215 aa18.68■□□□□ 0.58
CDK4-204ENST00000547281 UNC80Q8N2C7 3258 aa18.68■□□□□ 0.58
CDK4-204ENST00000547281 SH2B2O14492 632 aaPredicted RBP18.67■□□□□ 0.58
CDK4-204ENST00000547281 ZNF286BP0CG31 522 aa18.67■□□□□ 0.58
CDK4-204ENST00000547281 SMARCA1P28370 1054 aa18.67■□□□□ 0.58
CDK4-204ENST00000547281 SP2Q02086 613 aa18.67■□□□□ 0.58
CDK4-204ENST00000547281 KIAA0753Q2KHM9 967 aa18.67■□□□□ 0.58
CDK4-204ENST00000547281 GNPTABQ3T906 1256 aa18.67■□□□□ 0.58
CDK4-204ENST00000547281 CAGE1Q8TC20 777 aa18.67■□□□□ 0.58
CDK4-204ENST00000547281 VWCEQ96DN2 955 aa18.67■□□□□ 0.58
CDK4-204ENST00000547281 LRRC2Q9BYS8 371 aa18.67■□□□□ 0.58
CDK4-204ENST00000547281 PRDM12Q9H4Q4 367 aa18.67■□□□□ 0.58
CDK4-204ENST00000547281 RTEL1Q9NZ71 1219 aa18.67■□□□□ 0.58
CDK4-204ENST00000547281 SLC12A7Q9Y666 1083 aa18.67■□□□□ 0.58
CDK4-204ENST00000547281 SCN10AQ9Y5Y9 1956 aa18.66■□□□□ 0.58
CDK4-204ENST00000547281 EYSQ5T1H1 3165 aa18.66■□□□□ 0.58
CDK4-204ENST00000547281 RXRAP19793 462 aa18.66■□□□□ 0.58
CDK4-204ENST00000547281 LIFRP42702 1097 aa18.66■□□□□ 0.58
CDK4-204ENST00000547281 COL9A3Q14050 684 aaPredicted RBP18.66■□□□□ 0.58
CDK4-204ENST00000547281 HSDL1Q3SXM5 330 aa18.66■□□□□ 0.58
CDK4-204ENST00000547281 SYNE3Q6ZMZ3 975 aa18.66■□□□□ 0.58
CDK4-204ENST00000547281 CMTR1Q8N1G2 835 aaKnown RBP18.66■□□□□ 0.58
CDK4-204ENST00000547281 CCDC82Q8N4S0 544 aa18.66■□□□□ 0.58
CDK4-204ENST00000547281 SRBD1Q8N5C6 995 aaKnown RBP18.66■□□□□ 0.58
CDK4-204ENST00000547281 GPKOWQ92917 476 aaPredicted RBP eCLIP18.66■□□□□ 0.58
CDK4-204ENST00000547281 GTF2IRD1Q9UHL9 959 aa18.66■□□□□ 0.58
CDK4-204ENST00000547281 YBX2Q9Y2T7 364 aaKnown RBP18.66■□□□□ 0.58
CDK4-204ENST00000547281 CDH23Q9H251 3354 aa18.65■□□□□ 0.58
CDK4-204ENST00000547281 NOP56O00567 594 aaKnown RBP18.65■□□□□ 0.58
CDK4-204ENST00000547281 STAM2O75886 525 aa18.65■□□□□ 0.58
CDK4-204ENST00000547281 PLEKHA8P1O95397 391 aa18.65■□□□□ 0.58
CDK4-204ENST00000547281 UBA1P22314 1058 aaKnown RBP18.65■□□□□ 0.58
CDK4-204ENST00000547281 USP17L6PQ6QN14 398 aa18.65■□□□□ 0.58
CDK4-204ENST00000547281 RAB11FIP4Q86YS3 637 aa18.65■□□□□ 0.58
CDK4-204ENST00000547281 RASEFQ8IZ41 740 aa18.65■□□□□ 0.58
CDK4-204ENST00000547281 AFAP1L1Q8TED9 768 aa18.65■□□□□ 0.58
CDK4-204ENST00000547281 PPM1EQ8WY54 764 aa18.65■□□□□ 0.58
CDK4-204ENST00000547281 PCDHA11Q9Y5I1 949 aa18.65■□□□□ 0.58
CDK4-204ENST00000547281 PRUNE2Q8WUY3 3088 aa18.64■□□□□ 0.57
CDK4-204ENST00000547281 F2P00734 622 aa18.64■□□□□ 0.57
CDK4-204ENST00000547281 MYOGP15173 224 aa18.64■□□□□ 0.57
CDK4-204ENST00000547281 SELPP16109 830 aa18.64■□□□□ 0.57
CDK4-204ENST00000547281 IGFBP4P22692 258 aa18.64■□□□□ 0.57
CDK4-204ENST00000547281 MRPS9P82933 396 aaKnown RBP18.64■□□□□ 0.57
CDK4-204ENST00000547281 FANCBQ8NB91 859 aa18.64■□□□□ 0.57
CDK4-204ENST00000547281 NEK1Q96PY6 1258 aa18.64■□□□□ 0.57
CDK4-204ENST00000547281 PSTPIP2Q9H939 334 aa18.64■□□□□ 0.57
CDK4-204ENST00000547281 HAS3O00219 553 aa18.63■□□□□ 0.57
CDK4-204ENST00000547281 REC8O95072 547 aa18.63■□□□□ 0.57
CDK4-204ENST00000547281 PTK7Q13308 1070 aa18.63■□□□□ 0.57
CDK4-204ENST00000547281 NEDD9Q14511 834 aa18.63■□□□□ 0.57
CDK4-204ENST00000547281 PPP2R2DQ66LE6 453 aa18.63■□□□□ 0.57
CDK4-204ENST00000547281 LRRC8DQ7L1W4 858 aa18.63■□□□□ 0.57
CDK4-204ENST00000547281 CTAGE1Q96RT6 745 aa18.63■□□□□ 0.57
CDK4-204ENST00000547281 KIAA1217Q5T5P2 1943 aa18.62■□□□□ 0.57
CDK4-204ENST00000547281 hCG_1642624A0A1W2PR95 340 aa18.62■□□□□ 0.57
CDK4-204ENST00000547281 SPATA31C2B4DYI2 1134 aa18.62■□□□□ 0.57
CDK4-204ENST00000547281 KIF28PB7ZC32 967 aa18.62■□□□□ 0.57
CDK4-204ENST00000547281 H3BRB1 525 aa18.62■□□□□ 0.57
CDK4-204ENST00000547281 PIK3CDO00329 1044 aa18.62■□□□□ 0.57
CDK4-204ENST00000547281 MEIS2O14770 477 aa18.62■□□□□ 0.57
CDK4-204ENST00000547281 FIBPO43427 364 aa18.62■□□□□ 0.57
CDK4-204ENST00000547281 PARNO95453 639 aaKnown RBP18.62■□□□□ 0.57
CDK4-204ENST00000547281 CKBP12277 381 aa18.62■□□□□ 0.57
CDK4-204ENST00000547281 HOXD8P13378 290 aaPredicted RBP18.62■□□□□ 0.57
CDK4-204ENST00000547281 KCNJ6P48051 423 aa18.62■□□□□ 0.57
CDK4-204ENST00000547281 ZNF200P98182 395 aaPredicted RBP18.62■□□□□ 0.57
CDK4-204ENST00000547281 ADCK5Q3MIX3 580 aa18.62■□□□□ 0.57
CDK4-204ENST00000547281 XRRA1Q6P2D8 792 aa18.62■□□□□ 0.57
CDK4-204ENST00000547281 CYFIP1Q7L576 1253 aa18.62■□□□□ 0.57
CDK4-204ENST00000547281 NLRX1Q86UT6 975 aa18.62■□□□□ 0.57
CDK4-204ENST00000547281 PHOSPHO2Q8TCD6 241 aa18.62■□□□□ 0.57
CDK4-204ENST00000547281 DHX38Q92620 1227 aaKnown RBP18.62■□□□□ 0.57
CDK4-204ENST00000547281 TCEANC2Q96MN5 208 aa18.62■□□□□ 0.57
CDK4-204ENST00000547281 INPP4AQ96PE3 977 aaPredicted RBP18.62■□□□□ 0.57
CDK4-204ENST00000547281 SLC9A7Q96T83 725 aa18.62■□□□□ 0.57
CDK4-204ENST00000547281 TUT1Q9H6E5 874 aaKnown RBP18.62■□□□□ 0.57
CDK4-204ENST00000547281 BCAS3Q9H6U6 928 aa18.62■□□□□ 0.57
CDK4-204ENST00000547281 ICAM3P32942 547 aa18.61■□□□□ 0.57
CDK4-204ENST00000547281 KRT32Q14532 448 aa18.61■□□□□ 0.57
CDK4-204ENST00000547281 PCNX4Q63HM2 1172 aa18.61■□□□□ 0.57
CDK4-204ENST00000547281 MICU3Q86XE3 530 aa18.61■□□□□ 0.57
CDK4-204ENST00000547281 C16orf70Q9BSU1 422 aa18.61■□□□□ 0.57
CDK4-204ENST00000547281 COL25A1Q9BXS0 654 aaPredicted RBP18.61■□□□□ 0.57
CDK4-204ENST00000547281 USP26Q9BXU7 913 aa18.61■□□□□ 0.57
CDK4-204ENST00000547281 FRMPD4Q14CM0 1322 aa18.6■□□□□ 0.57
CDK4-204ENST00000547281 BAIAP3O94812 1187 aa18.6■□□□□ 0.57
CDK4-204ENST00000547281 LGALS2P05162 132 aa18.6■□□□□ 0.57
CDK4-204ENST00000547281 SP4Q02446 784 aa18.6■□□□□ 0.57
CDK4-204ENST00000547281 CCDC85BQ15834 202 aaPredicted RBP18.6■□□□□ 0.57
CDK4-204ENST00000547281 TSGA10IPQ3SY00 556 aa18.6■□□□□ 0.57
CDK4-204ENST00000547281 METTL7BQ6UX53 244 aa18.6■□□□□ 0.57
CDK4-204ENST00000547281 TMTC3Q6ZXV5 915 aa18.6■□□□□ 0.57
CDK4-204ENST00000547281 DHX32Q7L7V1 743 aaKnown RBP18.6■□□□□ 0.57
CDK4-204ENST00000547281 HEATR3Q7Z4Q2 680 aa18.6■□□□□ 0.57
CDK4-204ENST00000547281 SGMS1Q86VZ5 419 aa18.6■□□□□ 0.57
CDK4-204ENST00000547281 CHD9Q3L8U1 2897 aa18.6■□□□□ 0.57
CDK4-204ENST00000547281 MYH7BA7E2Y1 1941 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms