RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 ITGB8P26012 769 aa18.23■□□□□ 0.51
DDX54-204ENST00000546898 ADCY7P51828 1080 aa18.23■□□□□ 0.51
DDX54-204ENST00000546898 NTRK3Q16288 839 aa18.23■□□□□ 0.51
DDX54-204ENST00000546898 CELF3Q5SZQ8 465 aaKnown RBP18.23■□□□□ 0.51
DDX54-204ENST00000546898 MYSM1Q5VVJ2 828 aa18.23■□□□□ 0.51
DDX54-204ENST00000546898 NFRKBQ6P4R8 1299 aa18.23■□□□□ 0.51
DDX54-204ENST00000546898 NLRX1Q86UT6 975 aa18.23■□□□□ 0.51
DDX54-204ENST00000546898 CCDC12Q8WUD4 166 aaPredicted RBP18.23■□□□□ 0.51
DDX54-204ENST00000546898 IL17RAQ96F46 866 aa18.23■□□□□ 0.51
DDX54-204ENST00000546898 ALDH8A1Q9H2A2 487 aaPredicted RBP18.23■□□□□ 0.51
DDX54-204ENST00000546898 PDRG1Q9NUG6 133 aa18.23■□□□□ 0.51
DDX54-204ENST00000546898 PCDHA6Q9UN73 950 aa18.23■□□□□ 0.51
DDX54-204ENST00000546898 PCDHA8Q9Y5H6 950 aa18.23■□□□□ 0.51
DDX54-204ENST00000546898 TANC1Q9C0D5 1861 aa18.22■□□□□ 0.51
DDX54-204ENST00000546898 ESYT2A0FGR8 921 aa18.22■□□□□ 0.51
DDX54-204ENST00000546898 SMCO2A6NFE2 343 aa18.22■□□□□ 0.51
DDX54-204ENST00000546898 SPATA31C2B4DYI2 1134 aa18.22■□□□□ 0.51
DDX54-204ENST00000546898 SUPT20HL2P0C7V6 817 aa18.22■□□□□ 0.51
DDX54-204ENST00000546898 HOXD8P13378 290 aaPredicted RBP18.22■□□□□ 0.51
DDX54-204ENST00000546898 AKAP17AQ02040 695 aaKnown RBP18.22■□□□□ 0.51
DDX54-204ENST00000546898 FPGSQ05932 587 aa18.22■□□□□ 0.51
DDX54-204ENST00000546898 AP3B2Q13367 1082 aa18.22■□□□□ 0.51
DDX54-204ENST00000546898 NEDD9Q14511 834 aa18.22■□□□□ 0.51
DDX54-204ENST00000546898 NBPF20Q3BBV1 942 aa18.22■□□□□ 0.51
DDX54-204ENST00000546898 LRIT3Q3SXY7 679 aa18.22■□□□□ 0.51
DDX54-204ENST00000546898 GPRASP2Q96D09 838 aa18.22■□□□□ 0.51
DDX54-204ENST00000546898 ZFP91Q96JP5 570 aaPredicted RBP18.22■□□□□ 0.51
DDX54-204ENST00000546898 CDHR1Q96JP9 859 aa18.22■□□□□ 0.51
DDX54-204ENST00000546898 KATNAL1Q9BW62 490 aa18.22■□□□□ 0.51
DDX54-204ENST00000546898 B4GALT4O60513 344 aa18.21■□□□□ 0.51
DDX54-204ENST00000546898 CCT2P78371 535 aaKnown RBP18.21■□□□□ 0.51
DDX54-204ENST00000546898 SP2Q02086 613 aa18.21■□□□□ 0.51
DDX54-204ENST00000546898 MFSD5Q6N075 450 aa18.21■□□□□ 0.51
DDX54-204ENST00000546898 SPATA33Q96N06 139 aa18.21■□□□□ 0.51
DDX54-204ENST00000546898 SENP7Q9BQF6 1050 aa18.21■□□□□ 0.51
DDX54-204ENST00000546898 MLXIPQ9HAP2 919 aa18.21■□□□□ 0.51
DDX54-204ENST00000546898 RTEL1Q9NZ71 1219 aa18.21■□□□□ 0.51
DDX54-204ENST00000546898 PPFIA4O75335 1185 aa18.2■□□□□ 0.5
DDX54-204ENST00000546898 F2P00734 622 aa18.2■□□□□ 0.5
DDX54-204ENST00000546898 CLK2P49760 499 aaKnown RBP18.2■□□□□ 0.5
DDX54-204ENST00000546898 SEMA3FQ13275 785 aa18.2■□□□□ 0.5
DDX54-204ENST00000546898 PKN1Q16512 942 aa18.2■□□□□ 0.5
DDX54-204ENST00000546898 HSDL1Q3SXM5 330 aa18.2■□□□□ 0.5
DDX54-204ENST00000546898 FAM47CQ5HY64 1035 aa18.2■□□□□ 0.5
DDX54-204ENST00000546898 MCTP2Q6DN12 878 aa18.2■□□□□ 0.5
DDX54-204ENST00000546898 CPLX2Q6PUV4 134 aaKnown RBP18.2■□□□□ 0.5
DDX54-204ENST00000546898 METTL7BQ6UX53 244 aa18.2■□□□□ 0.5
DDX54-204ENST00000546898 SESTD1Q86VW0 696 aa18.2■□□□□ 0.5
DDX54-204ENST00000546898 GIMAP8Q8ND71 665 aaPredicted RBP18.2■□□□□ 0.5
DDX54-204ENST00000546898 CCDC148Q8NFR7 591 aa18.2■□□□□ 0.5
DDX54-204ENST00000546898 KAT2BQ92831 832 aa18.2■□□□□ 0.5
DDX54-204ENST00000546898 PHKBQ93100 1093 aa18.2■□□□□ 0.5
DDX54-204ENST00000546898 ZMYND12Q9H0C1 365 aa18.2■□□□□ 0.5
DDX54-204ENST00000546898 TRPV6Q9H1D0 765 aa18.2■□□□□ 0.5
DDX54-204ENST00000546898 CPLX1O14810 134 aa18.19■□□□□ 0.5
DDX54-204ENST00000546898 MAFGO15525 162 aa18.19■□□□□ 0.5
DDX54-204ENST00000546898 PPIGQ13427 754 aaKnown RBP eCLIP18.19■□□□□ 0.5
DDX54-204ENST00000546898 ANKRD1Q15327 319 aa18.19■□□□□ 0.5
DDX54-204ENST00000546898 TRIM22Q8IYM9 498 aa18.19■□□□□ 0.5
DDX54-204ENST00000546898 TMEM199Q8N511 208 aa18.19■□□□□ 0.5
DDX54-204ENST00000546898 SLC26A6Q9BXS9 759 aa18.19■□□□□ 0.5
DDX54-204ENST00000546898 ANO3Q9BYT9 981 aa18.19■□□□□ 0.5
DDX54-204ENST00000546898 PPP1R12CQ9BZL4 782 aa18.19■□□□□ 0.5
DDX54-204ENST00000546898 HIPK3Q9H422 1215 aa18.19■□□□□ 0.5
DDX54-204ENST00000546898 NCOA5Q9HCD5 579 aaKnown RBP18.19■□□□□ 0.5
DDX54-204ENST00000546898 C6orf50Q9HD87 102 aa18.19■□□□□ 0.5
DDX54-204ENST00000546898 UBIAD1Q9Y5Z9 338 aa18.19■□□□□ 0.5
DDX54-204ENST00000546898 NOP56O00567 594 aaKnown RBP18.18■□□□□ 0.5
DDX54-204ENST00000546898 GNA11P29992 359 aa18.18■□□□□ 0.5
DDX54-204ENST00000546898 PSEN2P49810 448 aa18.18■□□□□ 0.5
DDX54-204ENST00000546898 NOC4LQ9BVI4 516 aaKnown RBP18.18■□□□□ 0.5
DDX54-204ENST00000546898 TRMT13Q9NUP7 481 aaKnown RBP18.18■□□□□ 0.5
DDX54-204ENST00000546898 LAMA3Q16787 3333 aa18.18■□□□□ 0.5
DDX54-204ENST00000546898 TRIP12Q14669 1992 aaPredicted RBP18.17■□□□□ 0.5
DDX54-204ENST00000546898 KAT6AQ92794 2004 aa18.17■□□□□ 0.5
DDX54-204ENST00000546898 HAS3O00219 553 aa18.17■□□□□ 0.5
DDX54-204ENST00000546898 ZNF286BP0CG31 522 aa18.17■□□□□ 0.5
DDX54-204ENST00000546898 ITGB5P18084 799 aa18.17■□□□□ 0.5
DDX54-204ENST00000546898 SREBF1P36956 1147 aa18.17■□□□□ 0.5
DDX54-204ENST00000546898 MTMR1Q13613 665 aa18.17■□□□□ 0.5
DDX54-204ENST00000546898 MFSD10Q14728 455 aa18.17■□□□□ 0.5
DDX54-204ENST00000546898 GPR153Q6NV75 609 aa18.17■□□□□ 0.5
DDX54-204ENST00000546898 CYFIP1Q7L576 1253 aa18.17■□□□□ 0.5
DDX54-204ENST00000546898 REXO1Q8N1G1 1221 aaKnown RBP18.17■□□□□ 0.5
DDX54-204ENST00000546898 BICD2Q8TD16 824 aa18.17■□□□□ 0.5
DDX54-204ENST00000546898 JADE2Q9NQC1 790 aa18.17■□□□□ 0.5
DDX54-204ENST00000546898 SH3GLB2Q9NR46 395 aa18.17■□□□□ 0.5
DDX54-204ENST00000546898 SOX1O00570 391 aaPredicted RBP18.16■□□□□ 0.5
DDX54-204ENST00000546898 SORBS3O60504 671 aa18.16■□□□□ 0.5
DDX54-204ENST00000546898 CDKL5O76039 1030 aa18.16■□□□□ 0.5
DDX54-204ENST00000546898 DEXIO95424 95 aa18.16■□□□□ 0.5
DDX54-204ENST00000546898 KCNA2P16389 499 aa18.16■□□□□ 0.5
DDX54-204ENST00000546898 SSRP1Q08945 709 aaKnown RBP18.16■□□□□ 0.5
DDX54-204ENST00000546898 SHHQ15465 462 aa18.16■□□□□ 0.5
DDX54-204ENST00000546898 KIAA0753Q2KHM9 967 aa18.16■□□□□ 0.5
DDX54-204ENST00000546898 C9orf50Q5SZB4 431 aa18.16■□□□□ 0.5
DDX54-204ENST00000546898 FAM177A1Q8N128 213 aaPredicted RBP18.16■□□□□ 0.5
DDX54-204ENST00000546898 PGBD1Q96JS3 809 aa18.16■□□□□ 0.5
DDX54-204ENST00000546898 MXRA8Q9BRK3 442 aa18.16■□□□□ 0.5
DDX54-204ENST00000546898 GTF2IRD1Q9UHL9 959 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms