RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 CHURC1Q8WUH1 139 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 RASGRF2O14827 1237 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 EVI5O60447 810 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 ATP2B4P23634 1241 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 PEX19P40855 299 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 PFKFB3Q16875 520 aaPredicted RBP13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 FAM102BQ5T8I3 360 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 SLFN13Q68D06 897 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 ARHGEF18Q6ZSZ5 1173 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 SRLQ86TD4 932 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 DGKHQ86XP1 1220 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 RAB3IL1Q8TBN0 382 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 OSBPL9Q96SU4 736 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 ZMYND12Q9H0C1 365 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 FBXO2Q9UK22 296 aaPredicted RBP13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 POLR2MP0CAP2 368 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 NT5C2P49902 561 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 SESN3P58005 492 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 ZNF354CQ86Y25 554 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 CCDC127Q96BQ5 260 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 CEP72Q9P209 647 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 ZNF148Q9UQR1 794 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 ARHGEF40Q8TER5 1519 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 LRRC53A6NM62 1247 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 UBAP1LF5GYI3 381 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 CHUKO15111 745 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 ATP1A1P05023 1023 aaKnown RBP13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 CRKLP46109 303 aaKnown RBP13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 NSFP46459 744 aaKnown RBP13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 SLCO1A2P46721 670 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 PPP4R3CPQ6ZMV5 832 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 ANKRD35Q8N283 1001 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 TEKT3Q9BXF9 490 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 CDC42BPGQ6DT37 1551 aa13.29□□□□□ -0.28
NPC1L1-204ENST00000546276 MYO1FO00160 1098 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 MFAP3P55082 362 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 RASA3Q14644 834 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 PSMD1Q99460 953 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 LRRD1A4D1F6 860 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 USP17L8P0C7I0 530 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 PLA2G4BP0C869 781 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 SNX16P57768 344 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 LMNB2Q03252 620 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 FMR1Q06787 632 aaKnown RBP eCLIP13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 BFSP1Q12934 665 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 AOC3Q16853 763 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 OTUD6AQ7L8S5 288 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 ATP2A3Q93084 1043 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 AMNQ9BXJ7 453 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 RABL6Q3YEC7 729 aaPredicted RBP13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 SGO2Q562F6 1265 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 NFRKBQ6P4R8 1299 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 NSMFQ6X4W1 530 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 N4BP2L2Q92802 583 aaPredicted RBP13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 ZNF653Q96CK0 615 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 CCDC97Q96F63 343 aaPredicted RBP13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 FUCA2Q9BTY2 467 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 VIPAS39Q9H9C1 493 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 POC1B-GALNT4F8VUJ3 575 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 CLIC2O15247 247 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 C6orf118Q5T5N4 469 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 USP17L2Q6R6M4 530 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 CDAN1Q8IWY9 1227 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 COA7Q96BR5 231 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 WDR17Q8IZU2 1322 aa13.28□□□□□ -0.28
NPC1L1-204ENST00000546276 ERCC6L2Q5T890 1561 aa13.27□□□□□ -0.28
NPC1L1-204ENST00000546276 LRRN2O75325 713 aa13.27□□□□□ -0.28
NPC1L1-204ENST00000546276 ICA1Q05084 483 aa13.27□□□□□ -0.28
NPC1L1-204ENST00000546276 ADCY2Q08462 1091 aa13.27□□□□□ -0.28
NPC1L1-204ENST00000546276 LRCH2Q5VUJ6 765 aa13.27□□□□□ -0.28
NPC1L1-204ENST00000546276 CASC4Q6P4E1 433 aa13.27□□□□□ -0.28
NPC1L1-204ENST00000546276 RASGRP2Q7LDG7 609 aa13.27□□□□□ -0.28
NPC1L1-204ENST00000546276 ENAHQ8N8S7 591 aaPredicted RBP13.27□□□□□ -0.28
NPC1L1-204ENST00000546276 ENGASEQ8NFI3 743 aa13.27□□□□□ -0.28
NPC1L1-204ENST00000546276 DYNLL2Q96FJ2 89 aa13.27□□□□□ -0.28
NPC1L1-204ENST00000546276 LIMA1Q9UHB6 759 aaKnown RBP13.27□□□□□ -0.28
NPC1L1-204ENST00000546276 MRPL11Q9Y3B7 192 aaKnown RBP13.27□□□□□ -0.28
NPC1L1-204ENST00000546276 USP31Q70CQ4 1352 aa13.27□□□□□ -0.28
NPC1L1-204ENST00000546276 LOC102724428A0A0B4J2F2 783 aa13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 ARHGAP42A6NI28 874 aa13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 TPD52P55327 224 aaPredicted RBP13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 SIK1P57059 783 aa13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 IRX4P78413 519 aa13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 CERKLQ49MI3 558 aaPredicted RBP13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 TC2NQ8N9U0 490 aa13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 NT5C1BQ96P26 610 aa13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 L2HGDHQ9H9P8 463 aa13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 SSX2IPQ9Y2D8 614 aa13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 CPDO75976 1380 aa13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 CYP27B1O15528 508 aa13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 TTLL1O95922 423 aa13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 RNASELQ05823 741 aaKnown RBP13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 HADHQ16836 314 aaKnown RBP13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 PROM2Q8N271 834 aa13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 CFAP61Q8NHU2 1237 aa13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 CAPN11Q9UMQ6 739 aa13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 FGGP02679 453 aa13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 DLATP10515 647 aaKnown RBP13.27□□□□□ -0.29
NPC1L1-204ENST00000546276 YWHAEP62258 255 aaKnown RBP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 179.5 ms