RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 LAMTOR5O43504 91 aa8.4□□□□□ -1.06
CIT-215ENST00000544800 KPNA6O60684 536 aa8.4□□□□□ -1.06
CIT-215ENST00000544800 TECP42680 631 aa8.4□□□□□ -1.06
CIT-215ENST00000544800 RBM10P98175 930 aaKnown RBP8.4□□□□□ -1.06
CIT-215ENST00000544800 COL28A1Q2UY09 1125 aa8.4□□□□□ -1.06
CIT-215ENST00000544800 BRDTQ58F21 947 aaPredicted RBP8.4□□□□□ -1.06
CIT-215ENST00000544800 LAIR1Q6GTX8 287 aa8.4□□□□□ -1.06
CIT-215ENST00000544800 MAPKAPK5Q8IW41 473 aa8.4□□□□□ -1.06
CIT-215ENST00000544800 FAM133AQ8N9E0 248 aa8.4□□□□□ -1.06
CIT-215ENST00000544800 PPP1R13LQ8WUF5 828 aa8.4□□□□□ -1.06
CIT-215ENST00000544800 DHX38Q92620 1227 aaKnown RBP8.4□□□□□ -1.06
CIT-215ENST00000544800 CTAGE1Q96RT6 745 aa8.4□□□□□ -1.06
CIT-215ENST00000544800 POMKQ9H5K3 350 aa8.4□□□□□ -1.06
CIT-215ENST00000544800 TBC1D17Q9HA65 648 aa8.4□□□□□ -1.06
CIT-215ENST00000544800 ZSWIM6Q9HCJ5 1215 aa8.4□□□□□ -1.06
CIT-215ENST00000544800 CYP26B1Q9NR63 512 aa8.4□□□□□ -1.06
CIT-215ENST00000544800 USTQ9Y2C2 406 aa8.4□□□□□ -1.06
CIT-215ENST00000544800 TRIP12Q14669 1992 aaPredicted RBP8.4□□□□□ -1.06
CIT-215ENST00000544800 CFAP46Q8IYW2 2715 aa8.4□□□□□ -1.06
CIT-215ENST00000544800 NLRC5Q86WI3 1866 aa8.39□□□□□ -1.07
CIT-215ENST00000544800 PDS5AQ29RF7 1337 aaKnown RBP8.39□□□□□ -1.07
CIT-215ENST00000544800 KRBA1A5PL33 1030 aa8.39□□□□□ -1.07
CIT-215ENST00000544800 ASB14A6NK59 587 aa8.39□□□□□ -1.07
CIT-215ENST00000544800 J3QKU1 62 aa8.39□□□□□ -1.07
CIT-215ENST00000544800 GRM8O00222 908 aa8.39□□□□□ -1.07
CIT-215ENST00000544800 ITGB1P05556 798 aa8.39□□□□□ -1.07
CIT-215ENST00000544800 SPINK2P20155 84 aa8.39□□□□□ -1.07
CIT-215ENST00000544800 GUCY1A2P33402 732 aa8.39□□□□□ -1.07
CIT-215ENST00000544800 CSTF1Q05048 431 aaKnown RBP8.39□□□□□ -1.07
CIT-215ENST00000544800 FOXC1Q12948 553 aa8.39□□□□□ -1.07
CIT-215ENST00000544800 DUSP6Q16828 381 aa8.39□□□□□ -1.07
CIT-215ENST00000544800 KIAA1755Q5JYT7 1200 aa8.39□□□□□ -1.07
CIT-215ENST00000544800 CES5AQ6NT32 575 aa8.39□□□□□ -1.07
CIT-215ENST00000544800 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.39□□□□□ -1.07
CIT-215ENST00000544800 G2E3Q7L622 706 aa8.39□□□□□ -1.07
CIT-215ENST00000544800 ANKRD35Q8N283 1001 aa8.39□□□□□ -1.07
CIT-215ENST00000544800 C8orf58Q8NAV2 365 aa8.39□□□□□ -1.07
CIT-215ENST00000544800 TGFBRAP1Q8WUH2 860 aa8.39□□□□□ -1.07
CIT-215ENST00000544800 POF1BQ8WVV4 589 aa8.39□□□□□ -1.07
CIT-215ENST00000544800 NELL1Q92832 810 aa8.39□□□□□ -1.07
CIT-215ENST00000544800 NOL10Q9BSC4 688 aaKnown RBP8.39□□□□□ -1.07
CIT-215ENST00000544800 APOL5Q9BWW9 433 aa8.39□□□□□ -1.07
CIT-215ENST00000544800 TEX13BQ9BXU2 312 aa8.39□□□□□ -1.07
CIT-215ENST00000544800 PDGFCQ9NRA1 345 aa8.39□□□□□ -1.07
CIT-215ENST00000544800 UBR5O95071 2799 aaPredicted RBP8.39□□□□□ -1.07
CIT-215ENST00000544800 FLT1P17948 1338 aa8.38□□□□□ -1.07
CIT-215ENST00000544800 TK2O00142 265 aa8.38□□□□□ -1.07
CIT-215ENST00000544800 WDR46O15213 610 aaKnown RBP8.38□□□□□ -1.07
CIT-215ENST00000544800 BAG3O95817 575 aa8.38□□□□□ -1.07
CIT-215ENST00000544800 ZNF853P0CG23 659 aa8.38□□□□□ -1.07
CIT-215ENST00000544800 MTHFRP42898 656 aa8.38□□□□□ -1.07
CIT-215ENST00000544800 PHKA1P46020 1223 aa8.38□□□□□ -1.07
CIT-215ENST00000544800 ITIH3Q06033 890 aa8.38□□□□□ -1.07
CIT-215ENST00000544800 KCNC3Q14003 757 aa8.38□□□□□ -1.07
CIT-215ENST00000544800 MBTPS1Q14703 1052 aa8.38□□□□□ -1.07
CIT-215ENST00000544800 SEPT2Q15019 361 aa8.38□□□□□ -1.07
CIT-215ENST00000544800 DUSP28Q4G0W2 176 aa8.38□□□□□ -1.07
CIT-215ENST00000544800 TPRNQ4KMQ1 711 aa8.38□□□□□ -1.07
CIT-215ENST00000544800 SNRNP48Q6IEG0 339 aaKnown RBP8.38□□□□□ -1.07
CIT-215ENST00000544800 TAPT1Q6NXT6 567 aa8.38□□□□□ -1.07
CIT-215ENST00000544800 TRAF7Q6Q0C0 670 aa8.38□□□□□ -1.07
CIT-215ENST00000544800 REPS2Q8NFH8 660 aa8.38□□□□□ -1.07
CIT-215ENST00000544800 MICAL1Q8TDZ2 1067 aa8.38□□□□□ -1.07
CIT-215ENST00000544800 NSUN4Q96CB9 384 aaKnown RBP8.38□□□□□ -1.07
CIT-215ENST00000544800 SCNM1Q9BWG6 230 aa8.38□□□□□ -1.07
CIT-215ENST00000544800 ADAM7Q9H2U9 754 aa8.38□□□□□ -1.07
CIT-215ENST00000544800 ITPR3Q14573 2671 aa8.38□□□□□ -1.07
CIT-215ENST00000544800 SIPA1L1O43166 1804 aa8.38□□□□□ -1.07
CIT-215ENST00000544800 MYH13Q9UKX3 1938 aa8.37□□□□□ -1.07
CIT-215ENST00000544800 ADGRA3Q8IWK6 1321 aa8.37□□□□□ -1.07
CIT-215ENST00000544800 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.37□□□□□ -1.07
CIT-215ENST00000544800 C2orf72A6NCS6 295 aa8.37□□□□□ -1.07
CIT-215ENST00000544800 USP17L12C9JPN9 530 aa8.37□□□□□ -1.07
CIT-215ENST00000544800 USP17L21D6R901 530 aa8.37□□□□□ -1.07
CIT-215ENST00000544800 E9PSI1 815 aa8.37□□□□□ -1.07
CIT-215ENST00000544800 MMP3P08254 477 aa8.37□□□□□ -1.07
CIT-215ENST00000544800 NCLP19338 710 aaKnown RBP8.37□□□□□ -1.07
CIT-215ENST00000544800 FKBP5Q13451 457 aaPredicted RBP8.37□□□□□ -1.07
CIT-215ENST00000544800 CCDC6Q16204 474 aa8.37□□□□□ -1.07
CIT-215ENST00000544800 PLEKHG4Q58EX7 1191 aa8.37□□□□□ -1.07
CIT-215ENST00000544800 TMEM63BQ5T3F8 832 aa8.37□□□□□ -1.07
CIT-215ENST00000544800 ZNF618Q5T7W0 954 aa8.37□□□□□ -1.07
CIT-215ENST00000544800 GDF6Q6KF10 455 aaPredicted RBP8.37□□□□□ -1.07
CIT-215ENST00000544800 RUFY4Q6ZNE9 571 aa8.37□□□□□ -1.07
CIT-215ENST00000544800 KIAA1211Q6ZU35 1233 aa8.37□□□□□ -1.07
CIT-215ENST00000544800 SESTD1Q86VW0 696 aa8.37□□□□□ -1.07
CIT-215ENST00000544800 PROSER1Q86XN7 944 aa8.37□□□□□ -1.07
CIT-215ENST00000544800 SPICE1Q8N0Z3 855 aa8.37□□□□□ -1.07
CIT-215ENST00000544800 BBXQ8WY36 941 aaPredicted RBP8.37□□□□□ -1.07
CIT-215ENST00000544800 CLMPQ9H6B4 373 aa8.37□□□□□ -1.07
CIT-215ENST00000544800 SPATA6Q9NWH7 488 aaPredicted RBP8.37□□□□□ -1.07
CIT-215ENST00000544800 C9orf78Q9NZ63 289 aaPredicted RBP8.37□□□□□ -1.07
CIT-215ENST00000544800 FBXO40Q9UH90 709 aa8.37□□□□□ -1.07
CIT-215ENST00000544800 SAP30BPQ9UHR5 308 aaKnown RBP8.37□□□□□ -1.07
CIT-215ENST00000544800 SERPINB13Q9UIV8 391 aa8.37□□□□□ -1.07
CIT-215ENST00000544800 PPP1R9AQ9ULJ8 1098 aa8.37□□□□□ -1.07
CIT-215ENST00000544800 RIPK3Q9Y572 518 aa8.37□□□□□ -1.07
CIT-215ENST00000544800 NOTCH2Q04721 2471 aa8.36□□□□□ -1.07
CIT-215ENST00000544800 SCN10AQ9Y5Y9 1956 aa8.36□□□□□ -1.07
CIT-215ENST00000544800 PRB1P04280 392 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms