RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 EVI5LQ96CN4 794 aa15.02■□□□□ -0
USP28-212ENST00000544750 RMDN3Q96TC7 470 aa15.02■□□□□ -0
USP28-212ENST00000544750 EMSYQ7Z589 1322 aa15.01□□□□□ -0.01
USP28-212ENST00000544750 C19orf67A6NJJ6 358 aa15.01□□□□□ -0.01
USP28-212ENST00000544750 EIF3JO75822 258 aaKnown RBP15.01□□□□□ -0.01
USP28-212ENST00000544750 RGS20O76081 388 aa15.01□□□□□ -0.01
USP28-212ENST00000544750 PCP11498 1178 aaKnown RBP15.01□□□□□ -0.01
USP28-212ENST00000544750 HOXC8P31273 242 aa15.01□□□□□ -0.01
USP28-212ENST00000544750 SSTR3P32745 418 aaPredicted RBP15.01□□□□□ -0.01
USP28-212ENST00000544750 HAND2P61296 217 aa15.01□□□□□ -0.01
USP28-212ENST00000544750 GHRHRQ02643 423 aa15.01□□□□□ -0.01
USP28-212ENST00000544750 MCMDC2Q4G0Z9 681 aa15.01□□□□□ -0.01
USP28-212ENST00000544750 EPC2Q52LR7 807 aa15.01□□□□□ -0.01
USP28-212ENST00000544750 PLEKHG4Q58EX7 1191 aa15.01□□□□□ -0.01
USP28-212ENST00000544750 ZNF589Q86UQ0 364 aaPredicted RBP15.01□□□□□ -0.01
USP28-212ENST00000544750 SERINC5Q86VE9 423 aa15.01□□□□□ -0.01
USP28-212ENST00000544750 DGKHQ86XP1 1220 aa15.01□□□□□ -0.01
USP28-212ENST00000544750 TBC1D10CQ8IV04 446 aa15.01□□□□□ -0.01
USP28-212ENST00000544750 CTNNA3Q9UI47 895 aa15.01□□□□□ -0.01
USP28-212ENST00000544750 TECTAO75443 2155 aa15.01□□□□□ -0.01
USP28-212ENST00000544750 NEDD4P46934 1319 aa15□□□□□ -0.01
USP28-212ENST00000544750 BAZ2BQ9UIF8 2168 aaKnown RBP15□□□□□ -0.01
USP28-212ENST00000544750 H3BNC9 293 aa15□□□□□ -0.01
USP28-212ENST00000544750 H3BQ06 376 aaPredicted RBP15□□□□□ -0.01
USP28-212ENST00000544750 OPLAHO14841 1288 aa15□□□□□ -0.01
USP28-212ENST00000544750 DCXO43602 365 aa15□□□□□ -0.01
USP28-212ENST00000544750 PPFIA4O75335 1185 aa15□□□□□ -0.01
USP28-212ENST00000544750 NR3C2P08235 984 aa15□□□□□ -0.01
USP28-212ENST00000544750 MRE11P49959 708 aa15□□□□□ -0.01
USP28-212ENST00000544750 ZP2Q05996 745 aa15□□□□□ -0.01
USP28-212ENST00000544750 QRICH1Q2TAL8 776 aa15□□□□□ -0.01
USP28-212ENST00000544750 MYSM1Q5VVJ2 828 aa15□□□□□ -0.01
USP28-212ENST00000544750 MFSD6Q6ZSS7 791 aa15□□□□□ -0.01
USP28-212ENST00000544750 TICAM2Q86XR7 235 aa15□□□□□ -0.01
USP28-212ENST00000544750 ADGRF4Q8IZF3 695 aa15□□□□□ -0.01
USP28-212ENST00000544750 MYOCDQ8IZQ8 938 aa15□□□□□ -0.01
USP28-212ENST00000544750 ANKS1AQ92625 1134 aa15□□□□□ -0.01
USP28-212ENST00000544750 TOP1MTQ969P6 601 aa15□□□□□ -0.01
USP28-212ENST00000544750 PABPC5Q96DU9 382 aaKnown RBP15□□□□□ -0.01
USP28-212ENST00000544750 SAMD11Q96NU1 681 aa15□□□□□ -0.01
USP28-212ENST00000544750 OSBPL7Q9BZF2 842 aa15□□□□□ -0.01
USP28-212ENST00000544750 KCNH6Q9H252 994 aa15□□□□□ -0.01
USP28-212ENST00000544750 PXMP2Q9NR77 195 aa15□□□□□ -0.01
USP28-212ENST00000544750 MRVI1Q9Y6F6 885 aa15□□□□□ -0.01
USP28-212ENST00000544750 RSPH10B2B2RC85 870 aa14.99□□□□□ -0.01
USP28-212ENST00000544750 AMHP03971 560 aa14.99□□□□□ -0.01
USP28-212ENST00000544750 RSPH10BP0C881 870 aa14.99□□□□□ -0.01
USP28-212ENST00000544750 EIF2AK2P19525 551 aaKnown RBP14.99□□□□□ -0.01
USP28-212ENST00000544750 NHLH1Q02575 133 aa14.99□□□□□ -0.01
USP28-212ENST00000544750 PTPROQ16827 1216 aa14.99□□□□□ -0.01
USP28-212ENST00000544750 HSDL1Q3SXM5 330 aa14.99□□□□□ -0.01
USP28-212ENST00000544750 TIGD5Q53EQ6 642 aa14.99□□□□□ -0.01
USP28-212ENST00000544750 TCEAL5Q5H9L2 206 aa14.99□□□□□ -0.01
USP28-212ENST00000544750 ARHGEF16Q5VV41 709 aa14.99□□□□□ -0.01
USP28-212ENST00000544750 MCF2L2Q86YR7 1114 aa14.99□□□□□ -0.01
USP28-212ENST00000544750 BANK1Q8NDB2 785 aa14.99□□□□□ -0.01
USP28-212ENST00000544750 CRBNQ96SW2 442 aa14.99□□□□□ -0.01
USP28-212ENST00000544750 ZKSCAN3Q9BRR0 538 aa14.99□□□□□ -0.01
USP28-212ENST00000544750 C16orf70Q9BSU1 422 aa14.99□□□□□ -0.01
USP28-212ENST00000544750 PRKAG3Q9UGI9 489 aa14.99□□□□□ -0.01
USP28-212ENST00000544750 MRPL11Q9Y3B7 192 aaKnown RBP14.99□□□□□ -0.01
USP28-212ENST00000544750 TTC3P53804 2025 aa14.99□□□□□ -0.01
USP28-212ENST00000544750 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.98□□□□□ -0.01
USP28-212ENST00000544750 LTBRP36941 435 aa14.98□□□□□ -0.01
USP28-212ENST00000544750 HSD17B4P51659 736 aa14.98□□□□□ -0.01
USP28-212ENST00000544750 PDE1AP54750 535 aa14.98□□□□□ -0.01
USP28-212ENST00000544750 SP2Q02086 613 aa14.98□□□□□ -0.01
USP28-212ENST00000544750 GPM6BQ13491 265 aa14.98□□□□□ -0.01
USP28-212ENST00000544750 CELF3Q5SZQ8 465 aaKnown RBP14.98□□□□□ -0.01
USP28-212ENST00000544750 DHX37Q8IY37 1157 aaKnown RBP14.98□□□□□ -0.01
USP28-212ENST00000544750 TMEM192Q8IY95 271 aa14.98□□□□□ -0.01
USP28-212ENST00000544750 PNMA1Q8ND90 353 aa14.98□□□□□ -0.01
USP28-212ENST00000544750 FBXL18Q96ME1 805 aa14.98□□□□□ -0.01
USP28-212ENST00000544750 JMJD4Q9H9V9 463 aa14.98□□□□□ -0.01
USP28-212ENST00000544750 KIAA1671Q9BY89 1806 aa14.98□□□□□ -0.01
USP28-212ENST00000544750 CCDC171Q6TFL3 1326 aa14.97□□□□□ -0.01
USP28-212ENST00000544750 LINC00271P0C7V0 271 aa14.97□□□□□ -0.01
USP28-212ENST00000544750 THPOP40225 353 aa14.97□□□□□ -0.01
USP28-212ENST00000544750 NMIQ13287 307 aaPredicted RBP14.97□□□□□ -0.01
USP28-212ENST00000544750 CTC1Q2NKJ3 1217 aa14.97□□□□□ -0.01
USP28-212ENST00000544750 ASPRV1Q53RT3 343 aa14.97□□□□□ -0.01
USP28-212ENST00000544750 STOX1Q6ZVD7 989 aa14.97□□□□□ -0.01
USP28-212ENST00000544750 FBXO11Q86XK2 927 aa14.97□□□□□ -0.01
USP28-212ENST00000544750 ESR2Q92731 530 aa14.97□□□□□ -0.01
USP28-212ENST00000544750 UIMC1Q96RL1 719 aa14.97□□□□□ -0.01
USP28-212ENST00000544750 PDCD2LQ9BRP1 358 aa14.97□□□□□ -0.01
USP28-212ENST00000544750 LOXHD1Q8IVV2 1947 aa14.97□□□□□ -0.01
USP28-212ENST00000544750 GGPS1O95749 300 aa14.96□□□□□ -0.01
USP28-212ENST00000544750 CFBP00751 764 aa14.96□□□□□ -0.01
USP28-212ENST00000544750 NT5C2P49902 561 aa14.96□□□□□ -0.01
USP28-212ENST00000544750 CSPP1Q1MSJ5 1256 aa14.96□□□□□ -0.01
USP28-212ENST00000544750 KCNV1Q6PIU1 500 aa14.96□□□□□ -0.01
USP28-212ENST00000544750 VSIG10LQ86VR7 867 aa14.96□□□□□ -0.01
USP28-212ENST00000544750 ADHFE1Q8IWW8 467 aa14.96□□□□□ -0.01
USP28-212ENST00000544750 MTMR8Q96EF0 704 aa14.96□□□□□ -0.01
USP28-212ENST00000544750 RNF41Q9H4P4 317 aaPredicted RBP14.96□□□□□ -0.01
USP28-212ENST00000544750 NSUN3Q9H649 340 aaKnown RBP14.96□□□□□ -0.01
USP28-212ENST00000544750 C5orf67F2Z3F1 127 aa14.95□□□□□ -0.02
USP28-212ENST00000544750 TREHO43280 583 aa14.95□□□□□ -0.02
USP28-212ENST00000544750 CAND2O75155 1236 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms