RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 MSL3Q8N5Y2 521 aaKnown RBP5□□□□□ -1.61
SNHG1-220ENST00000544550 ANKRD44Q8N8A2 993 aa5□□□□□ -1.61
SNHG1-220ENST00000544550 KLHDC4Q8TBB5 520 aa5□□□□□ -1.61
SNHG1-220ENST00000544550 FAM129BQ96TA1 746 aa5□□□□□ -1.61
SNHG1-220ENST00000544550 MOV10L1Q9BXT6 1211 aaKnown RBP5□□□□□ -1.61
SNHG1-220ENST00000544550 KIAA1683Q9H0B3 1180 aa5□□□□□ -1.61
SNHG1-220ENST00000544550 IRF2BPLQ9H1B7 796 aa5□□□□□ -1.61
SNHG1-220ENST00000544550 CRISPLD1Q9H336 500 aa5□□□□□ -1.61
SNHG1-220ENST00000544550 LMCD1Q9NZU5 365 aa5□□□□□ -1.61
SNHG1-220ENST00000544550 FAM184BQ9ULE4 1060 aa5□□□□□ -1.61
SNHG1-220ENST00000544550 FAM50BQ9Y247 325 aa5□□□□□ -1.61
SNHG1-220ENST00000544550 TTC28Q96AY4 2481 aa5□□□□□ -1.61
SNHG1-220ENST00000544550 ZNF236Q9UL36 1845 aa5□□□□□ -1.61
SNHG1-220ENST00000544550 RBM47A0AV96 593 aaKnown RBP4.99□□□□□ -1.61
SNHG1-220ENST00000544550 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-220ENST00000544550 KIF28PB7ZC32 967 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 IGSF3O75054 1194 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 DUSP11O75319 330 aaKnown RBP4.99□□□□□ -1.61
SNHG1-220ENST00000544550 GH2P01242 217 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 F11P03951 625 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 CA3P07451 260 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 ACTN1P12814 892 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 COPB2P35606 906 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 IL15P40933 162 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-220ENST00000544550 CDK7P50613 346 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 RABGGTBP53611 331 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 AAMPQ13685 434 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 RASGRF1Q13972 1273 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 MVPQ14764 893 aaKnown RBP4.99□□□□□ -1.61
SNHG1-220ENST00000544550 COL19A1Q14993 1142 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 ZYXQ15942 572 aaKnown RBP4.99□□□□□ -1.61
SNHG1-220ENST00000544550 KCNA10Q16322 511 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 LEXMQ3ZCV2 418 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 PRAMEF19Q5SWL8 479 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 ERMP1Q7Z2K6 904 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 TMC7Q7Z402 723 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 NCAPG2Q86XI2 1143 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 FAM178BQ8IXR5 827 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 FAM126BQ8IXS8 530 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 KLHDC9Q8NEP7 349 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 PHOSPHO2Q8TCD6 241 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 EDEM1Q92611 657 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 NSUN4Q96CB9 384 aaKnown RBP4.99□□□□□ -1.61
SNHG1-220ENST00000544550 HSH2DQ96JZ2 352 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 SLC9A7Q96T83 725 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 TINF2Q9BSI4 451 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 KRTAP9-2Q9BYQ4 174 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 UPF3BQ9BZI7 483 aaKnown RBP4.99□□□□□ -1.61
SNHG1-220ENST00000544550 HIPK3Q9H422 1215 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 RPAP3Q9H6T3 665 aaPredicted RBP4.99□□□□□ -1.61
SNHG1-220ENST00000544550 CABP5Q9NP86 173 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 POLIQ9UNA4 740 aa4.99□□□□□ -1.61
SNHG1-220ENST00000544550 ZNF536O15090 1300 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 FLT1P17948 1338 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 FANCIQ9NVI1 1328 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 SYNRGQ9UMZ2 1314 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 LRRC37A2A6NM11 1700 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 AK9Q5TCS8 1911 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 A0A1W2PNR3 127 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 MSTNO14793 375 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 OPLAHO14841 1288 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 TREHO43280 583 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 MAN1A2O60476 641 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 CABYRO75952 493 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 CD4P01730 458 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 PDGFAP04085 211 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 ASGR1P07306 291 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 C6orf222P0C671 652 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-220ENST00000544550 ZNF865P0CJ78 1059 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-220ENST00000544550 CYP2C18P33260 490 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 IRS1P35568 1242 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 USP5P45974 858 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 RFX5P48382 616 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-220ENST00000544550 IDH3AP50213 366 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 DNM1Q05193 864 aaKnown RBP4.98□□□□□ -1.61
SNHG1-220ENST00000544550 PLS1Q14651 629 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 KCTD2Q14681 263 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 RAB3GAP1Q15042 981 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 ARSJQ5FYB0 599 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-220ENST00000544550 CCSAPQ6IQ19 270 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-220ENST00000544550 LRRC69Q6ZNQ3 347 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 ATG9AQ7Z3C6 839 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 BTLAQ7Z6A9 289 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 CERS3Q8IU89 383 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 TGFBRAP1Q8WUH2 860 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 ARNTL2Q8WYA1 636 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 DMRTB1Q96MA1 342 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 MMP19Q99542 508 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 TANGO6Q9C0B7 1094 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 SIL1Q9H173 461 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 DNAJC18Q9H819 358 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 UBE2ZQ9H832 354 aaPredicted RBP4.98□□□□□ -1.61
SNHG1-220ENST00000544550 CD320Q9NPF0 282 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 FAM13BQ9NYF5 915 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 RAI14Q9P0K7 980 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 PRKAG3Q9UGI9 489 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 HDAC5Q9UQL6 1122 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 AKAP2Q9Y2D5 859 aa4.98□□□□□ -1.61
SNHG1-220ENST00000544550 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-220ENST00000544550 SLC35F4A4IF30 521 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms