RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 SPDYE1Q8NFV5 336 aaPredicted RBP11.13□□□□□ -0.63
C2CD3-220ENST00000544293 NSUN6Q8TEA1 469 aaKnown RBP11.13□□□□□ -0.63
C2CD3-220ENST00000544293 PABPC5Q96DU9 382 aaKnown RBP11.13□□□□□ -0.63
C2CD3-220ENST00000544293 GPATCH3Q96I76 525 aa11.13□□□□□ -0.63
C2CD3-220ENST00000544293 FAM227BQ96M60 508 aa11.13□□□□□ -0.63
C2CD3-220ENST00000544293 UIMC1Q96RL1 719 aa11.13□□□□□ -0.63
C2CD3-220ENST00000544293 RMDN3Q96TC7 470 aa11.13□□□□□ -0.63
C2CD3-220ENST00000544293 CHMP4BQ9H444 224 aaKnown RBP11.13□□□□□ -0.63
C2CD3-220ENST00000544293 ALG13Q9NP73 1137 aaKnown RBP11.13□□□□□ -0.63
C2CD3-220ENST00000544293 PTPRSQ13332 1948 aa11.12□□□□□ -0.63
C2CD3-220ENST00000544293 MYH4Q9Y623 1939 aa11.12□□□□□ -0.63
C2CD3-220ENST00000544293 A0A0D9SFI3 127 aa11.12□□□□□ -0.63
C2CD3-220ENST00000544293 EFCAB14O75071 495 aa11.12□□□□□ -0.63
C2CD3-220ENST00000544293 PPFIA4O75335 1185 aa11.12□□□□□ -0.63
C2CD3-220ENST00000544293 EIF3JO75822 258 aaKnown RBP11.12□□□□□ -0.63
C2CD3-220ENST00000544293 NR3C2P08235 984 aa11.12□□□□□ -0.63
C2CD3-220ENST00000544293 HSPD1P10809 573 aaKnown RBP11.12□□□□□ -0.63
C2CD3-220ENST00000544293 HAND2P61296 217 aa11.12□□□□□ -0.63
C2CD3-220ENST00000544293 GPM6BQ13491 265 aa11.12□□□□□ -0.63
C2CD3-220ENST00000544293 STXBP2Q15833 593 aa11.12□□□□□ -0.63
C2CD3-220ENST00000544293 CDC37Q16543 378 aaPredicted RBP11.12□□□□□ -0.63
C2CD3-220ENST00000544293 PUS10Q3MIT2 529 aaKnown RBP11.12□□□□□ -0.63
C2CD3-220ENST00000544293 TMEM192Q8IY95 271 aa11.12□□□□□ -0.63
C2CD3-220ENST00000544293 MYOCDQ8IZQ8 938 aa11.12□□□□□ -0.63
C2CD3-220ENST00000544293 PPTC7Q8NI37 304 aa11.12□□□□□ -0.63
C2CD3-220ENST00000544293 GPKOWQ92917 476 aaPredicted RBP eCLIP11.12□□□□□ -0.63
C2CD3-220ENST00000544293 IWS1Q96ST2 819 aa11.12□□□□□ -0.63
C2CD3-220ENST00000544293 MAF1Q9H063 256 aa11.12□□□□□ -0.63
C2CD3-220ENST00000544293 RCAN3Q9UKA8 241 aa11.12□□□□□ -0.63
C2CD3-220ENST00000544293 PNMA2Q9UL42 364 aa11.12□□□□□ -0.63
C2CD3-220ENST00000544293 TELO2Q9Y4R8 837 aa11.12□□□□□ -0.63
C2CD3-220ENST00000544293 RSPH10B2B2RC85 870 aa11.11□□□□□ -0.63
C2CD3-220ENST00000544293 SORBS3O60504 671 aa11.11□□□□□ -0.63
C2CD3-220ENST00000544293 RSPH10BP0C881 870 aa11.11□□□□□ -0.63
C2CD3-220ENST00000544293 EIF2AK2P19525 551 aaKnown RBP11.11□□□□□ -0.63
C2CD3-220ENST00000544293 GTF2F1P35269 517 aaKnown RBP eCLIP11.11□□□□□ -0.63
C2CD3-220ENST00000544293 THPOP40225 353 aa11.11□□□□□ -0.63
C2CD3-220ENST00000544293 GHRHRQ02643 423 aa11.11□□□□□ -0.63
C2CD3-220ENST00000544293 LAMC2Q13753 1193 aa11.11□□□□□ -0.63
C2CD3-220ENST00000544293 CAMK1Q14012 370 aa11.11□□□□□ -0.63
C2CD3-220ENST00000544293 SLC35G1Q2M3R5 365 aa11.11□□□□□ -0.63
C2CD3-220ENST00000544293 QRICH1Q2TAL8 776 aa11.11□□□□□ -0.63
C2CD3-220ENST00000544293 IER5LQ5T953 404 aa11.11□□□□□ -0.63
C2CD3-220ENST00000544293 ADHFE1Q8IWW8 467 aa11.11□□□□□ -0.63
C2CD3-220ENST00000544293 ADGRF4Q8IZF3 695 aa11.11□□□□□ -0.63
C2CD3-220ENST00000544293 ZFP91Q96JP5 570 aaPredicted RBP11.11□□□□□ -0.63
C2CD3-220ENST00000544293 ZKSCAN3Q9BRR0 538 aa11.11□□□□□ -0.63
C2CD3-220ENST00000544293 JMJD4Q9H9V9 463 aa11.11□□□□□ -0.63
C2CD3-220ENST00000544293 PXMP2Q9NR77 195 aa11.11□□□□□ -0.63
C2CD3-220ENST00000544293 HELLSQ9NRZ9 838 aa11.11□□□□□ -0.63
C2CD3-220ENST00000544293 PRKAG3Q9UGI9 489 aa11.11□□□□□ -0.63
C2CD3-220ENST00000544293 TREHO43280 583 aa11.1□□□□□ -0.63
C2CD3-220ENST00000544293 PPP1R11O60927 126 aaPredicted RBP11.1□□□□□ -0.63
C2CD3-220ENST00000544293 AMHP03971 560 aa11.1□□□□□ -0.63
C2CD3-220ENST00000544293 MX1P20591 662 aa11.1□□□□□ -0.63
C2CD3-220ENST00000544293 HYAL1Q12794 435 aa11.1□□□□□ -0.63
C2CD3-220ENST00000544293 SMAD2Q15796 467 aaKnown RBP11.1□□□□□ -0.63
C2CD3-220ENST00000544293 CELF3Q5SZQ8 465 aaKnown RBP11.1□□□□□ -0.63
C2CD3-220ENST00000544293 VSIG10LQ86VR7 867 aa11.1□□□□□ -0.63
C2CD3-220ENST00000544293 FBXO11Q86XK2 927 aa11.1□□□□□ -0.63
C2CD3-220ENST00000544293 DGKHQ86XP1 1220 aa11.1□□□□□ -0.63
C2CD3-220ENST00000544293 PRSS33Q8NF86 280 aa11.1□□□□□ -0.63
C2CD3-220ENST00000544293 IL31RAQ8NI17 732 aa11.1□□□□□ -0.63
C2CD3-220ENST00000544293 SNX27Q96L92 541 aa11.1□□□□□ -0.63
C2CD3-220ENST00000544293 MPHOSPH6Q99547 160 aaKnown RBP11.1□□□□□ -0.63
C2CD3-220ENST00000544293 PDCD2LQ9BRP1 358 aa11.1□□□□□ -0.63
C2CD3-220ENST00000544293 KCNH6Q9H252 994 aa11.1□□□□□ -0.63
C2CD3-220ENST00000544293 RNPEPQ9H4A4 650 aa11.1□□□□□ -0.63
C2CD3-220ENST00000544293 NSUN3Q9H649 340 aaKnown RBP11.1□□□□□ -0.63
C2CD3-220ENST00000544293 RC3H2Q9HBD1 1191 aaKnown RBP11.1□□□□□ -0.63
C2CD3-220ENST00000544293 TOMM22Q9NS69 142 aa11.1□□□□□ -0.63
C2CD3-220ENST00000544293 CTNNA3Q9UI47 895 aa11.1□□□□□ -0.63
C2CD3-220ENST00000544293 MUTYHQ9UIF7 546 aa11.1□□□□□ -0.63
C2CD3-220ENST00000544293 ABCB11O95342 1321 aa11.09□□□□□ -0.63
C2CD3-220ENST00000544293 NEDD4P46934 1319 aa11.09□□□□□ -0.63
C2CD3-220ENST00000544293 MYO7AQ13402 2215 aa11.09□□□□□ -0.63
C2CD3-220ENST00000544293 B4DLN1 442 aa11.09□□□□□ -0.63
C2CD3-220ENST00000544293 GRM6O15303 877 aa11.09□□□□□ -0.63
C2CD3-220ENST00000544293 LINC01565O15544 149 aa11.09□□□□□ -0.63
C2CD3-220ENST00000544293 UPP2O95045 317 aa11.09□□□□□ -0.63
C2CD3-220ENST00000544293 HSD17B4P51659 736 aa11.09□□□□□ -0.63
C2CD3-220ENST00000544293 MRPL12P52815 198 aaKnown RBP11.09□□□□□ -0.63
C2CD3-220ENST00000544293 ADAM17P78536 824 aa11.09□□□□□ -0.63
C2CD3-220ENST00000544293 PTPROQ16827 1216 aa11.09□□□□□ -0.63
C2CD3-220ENST00000544293 MCMDC2Q4G0Z9 681 aa11.09□□□□□ -0.63
C2CD3-220ENST00000544293 HERC4Q5GLZ8 1057 aaPredicted RBP11.09□□□□□ -0.63
C2CD3-220ENST00000544293 GPATCH4Q5T3I0 446 aaKnown RBP11.09□□□□□ -0.63
C2CD3-220ENST00000544293 ARHGEF16Q5VV41 709 aa11.09□□□□□ -0.63
C2CD3-220ENST00000544293 STOX1Q6ZVD7 989 aa11.09□□□□□ -0.63
C2CD3-220ENST00000544293 DHX37Q8IY37 1157 aaKnown RBP11.09□□□□□ -0.63
C2CD3-220ENST00000544293 EVI5LQ96CN4 794 aa11.09□□□□□ -0.63
C2CD3-220ENST00000544293 MTMR8Q96EF0 704 aa11.09□□□□□ -0.63
C2CD3-220ENST00000544293 KATNAL1Q9BW62 490 aa11.09□□□□□ -0.63
C2CD3-220ENST00000544293 MRVI1Q9Y6F6 885 aa11.09□□□□□ -0.63
C2CD3-220ENST00000544293 WDFY4Q6ZS81 3184 aa11.08□□□□□ -0.64
C2CD3-220ENST00000544293 COL4A4P53420 1690 aaPredicted RBP11.08□□□□□ -0.64
C2CD3-220ENST00000544293 MYH7P12883 1935 aa11.08□□□□□ -0.64
C2CD3-220ENST00000544293 C5orf67F2Z3F1 127 aa11.08□□□□□ -0.64
C2CD3-220ENST00000544293 MBTPS2O43462 519 aa11.08□□□□□ -0.64
C2CD3-220ENST00000544293 TBX10O75333 385 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms