RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 RTEL1Q9NZ71 1219 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 NAP1L2Q9ULW6 460 aaPredicted RBP8.25□□□□□ -1.09
NUP43-206ENST00000543637 DOCK5Q9H7D0 1870 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 UMODL1Q5DID0 1318 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 TRIOBPQ9H2D6 2365 aa8.25□□□□□ -1.09
NUP43-206ENST00000543637 CEP290O15078 2479 aa8.24□□□□□ -1.09
NUP43-206ENST00000543637 SPDYE3A6NKU9 549 aa8.24□□□□□ -1.09
NUP43-206ENST00000543637 SH2B2O14492 632 aaPredicted RBP8.24□□□□□ -1.09
NUP43-206ENST00000543637 OPLAHO14841 1288 aa8.24□□□□□ -1.09
NUP43-206ENST00000543637 CYTH3O43739 400 aa8.24□□□□□ -1.09
NUP43-206ENST00000543637 SORBS3O60504 671 aa8.24□□□□□ -1.09
NUP43-206ENST00000543637 IQCF3P0C7M6 154 aa8.24□□□□□ -1.09
NUP43-206ENST00000543637 GNAT1P11488 350 aa8.24□□□□□ -1.09
NUP43-206ENST00000543637 MFSD10Q14728 455 aa8.24□□□□□ -1.09
NUP43-206ENST00000543637 KIAA0753Q2KHM9 967 aa8.24□□□□□ -1.09
NUP43-206ENST00000543637 MYSM1Q5VVJ2 828 aa8.24□□□□□ -1.09
NUP43-206ENST00000543637 XRRA1Q6P2D8 792 aa8.24□□□□□ -1.09
NUP43-206ENST00000543637 DHX32Q7L7V1 743 aaKnown RBP8.24□□□□□ -1.09
NUP43-206ENST00000543637 SESTD1Q86VW0 696 aa8.24□□□□□ -1.09
NUP43-206ENST00000543637 MAFAQ8NHW3 353 aaPredicted RBP8.24□□□□□ -1.09
NUP43-206ENST00000543637 AFAP1L1Q8TED9 768 aa8.24□□□□□ -1.09
NUP43-206ENST00000543637 USP26Q9BXU7 913 aa8.24□□□□□ -1.09
NUP43-206ENST00000543637 PBX4Q9BYU1 374 aa8.24□□□□□ -1.09
NUP43-206ENST00000543637 PSTPIP2Q9H939 334 aa8.24□□□□□ -1.09
NUP43-206ENST00000543637 TAF6LQ9Y6J9 622 aa8.24□□□□□ -1.09
NUP43-206ENST00000543637 GRXCR1A8MXD5 290 aa8.23□□□□□ -1.09
NUP43-206ENST00000543637 MAFGO15525 162 aa8.23□□□□□ -1.09
NUP43-206ENST00000543637 FIBPO43427 364 aa8.23□□□□□ -1.09
NUP43-206ENST00000543637 ATP2A2P16615 1042 aaKnown RBP8.23□□□□□ -1.09
NUP43-206ENST00000543637 RXRAP19793 462 aa8.23□□□□□ -1.09
NUP43-206ENST00000543637 KCNJ6P48051 423 aa8.23□□□□□ -1.09
NUP43-206ENST00000543637 PTK7Q13308 1070 aa8.23□□□□□ -1.09
NUP43-206ENST00000543637 RASIP1Q5U651 963 aa8.23□□□□□ -1.09
NUP43-206ENST00000543637 PCNX4Q63HM2 1172 aa8.23□□□□□ -1.09
NUP43-206ENST00000543637 GDF6Q6KF10 455 aaPredicted RBP8.23□□□□□ -1.09
NUP43-206ENST00000543637 USP17L6PQ6QN14 398 aa8.23□□□□□ -1.09
NUP43-206ENST00000543637 SRBD1Q8N5C6 995 aaKnown RBP8.23□□□□□ -1.09
NUP43-206ENST00000543637 PHOSPHO2Q8TCD6 241 aa8.23□□□□□ -1.09
NUP43-206ENST00000543637 PPP1R13LQ8WUF5 828 aa8.23□□□□□ -1.09
NUP43-206ENST00000543637 TNPO1Q92973 898 aaKnown RBP8.23□□□□□ -1.09
NUP43-206ENST00000543637 ZFP91Q96JP5 570 aaPredicted RBP8.23□□□□□ -1.09
NUP43-206ENST00000543637 CDHR1Q96JP9 859 aa8.23□□□□□ -1.09
NUP43-206ENST00000543637 ZBED2Q9BTP6 218 aa8.23□□□□□ -1.09
NUP43-206ENST00000543637 LRRC2Q9BYS8 371 aa8.23□□□□□ -1.09
NUP43-206ENST00000543637 WNT8AQ9H1J5 351 aa8.23□□□□□ -1.09
NUP43-206ENST00000543637 TSPYL2Q9H2G4 693 aaPredicted RBP8.23□□□□□ -1.09
NUP43-206ENST00000543637 NKX2-4Q9H2Z4 354 aa8.23□□□□□ -1.09
NUP43-206ENST00000543637 TTYH1Q9H313 450 aaPredicted RBP8.23□□□□□ -1.09
NUP43-206ENST00000543637 HDAC6Q9UBN7 1215 aa8.23□□□□□ -1.09
NUP43-206ENST00000543637 GTF2IRD1Q9UHL9 959 aa8.23□□□□□ -1.09
NUP43-206ENST00000543637 PCDHA11Q9Y5I1 949 aa8.23□□□□□ -1.09
NUP43-206ENST00000543637 TANC1Q9C0D5 1861 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 CCDC196A0A1B0GTZ2 297 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 C17orf102A2RUQ5 167 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 SPATA31C2B4DYI2 1134 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 H3BRB1 525 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 PIK3CDO00329 1044 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 ZBTB43O43298 467 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 EFCAB14O75071 495 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 BAIAP3O94812 1187 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 PLEKHA8P1O95397 391 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 SELPP16109 830 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 IGFBP4P22692 258 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 PSMA5P28066 241 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 ICAM3P32942 547 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 PBX2P40425 430 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 AKAP17AQ02040 695 aaKnown RBP8.22□□□□□ -1.09
NUP43-206ENST00000543637 IKBKEQ14164 716 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 GRIN2CQ14957 1233 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 HSDL1Q3SXM5 330 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 TSGA10IPQ3SY00 556 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 LRRC8DQ7L1W4 858 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 CYFIP1Q7L576 1253 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 HEATR3Q7Z4Q2 680 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 SGMS1Q86VZ5 419 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 MICU3Q86XE3 530 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.22□□□□□ -1.09
NUP43-206ENST00000543637 CMTR1Q8N1G2 835 aaKnown RBP8.22□□□□□ -1.09
NUP43-206ENST00000543637 PPM1EQ8WY54 764 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 KAT2BQ92831 832 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 ATP6V0A1Q93050 837 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 SLC9A7Q96T83 725 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 SENP7Q9BQF6 1050 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 GLT8D2Q9H1C3 349 aa8.22□□□□□ -1.09
NUP43-206ENST00000543637 TUT1Q9H6E5 874 aaKnown RBP8.22□□□□□ -1.09
NUP43-206ENST00000543637 CXXC1Q9P0U4 656 aaPredicted RBP8.22□□□□□ -1.09
NUP43-206ENST00000543637 ZNF215Q9UL58 517 aaPredicted RBP8.22□□□□□ -1.09
NUP43-206ENST00000543637 GOLGA8AA7E2F4 631 aa8.21□□□□□ -1.1
NUP43-206ENST00000543637 GOLGA8BA8MQT2 603 aa8.21□□□□□ -1.1
NUP43-206ENST00000543637 hCG_1984214I3L0E3 225 aa8.21□□□□□ -1.1
NUP43-206ENST00000543637 HAS3O00219 553 aa8.21□□□□□ -1.1
NUP43-206ENST00000543637 MEIS2O14770 477 aa8.21□□□□□ -1.1
NUP43-206ENST00000543637 RGS20O76081 388 aa8.21□□□□□ -1.1
NUP43-206ENST00000543637 REC8O95072 547 aa8.21□□□□□ -1.1
NUP43-206ENST00000543637 F2P00734 622 aa8.21□□□□□ -1.1
NUP43-206ENST00000543637 FOSP01100 380 aaPredicted RBP8.21□□□□□ -1.1
NUP43-206ENST00000543637 ZNF286BP0CG31 522 aa8.21□□□□□ -1.1
NUP43-206ENST00000543637 CKBP12277 381 aa8.21□□□□□ -1.1
NUP43-206ENST00000543637 UBA1P22314 1058 aaKnown RBP8.21□□□□□ -1.1
NUP43-206ENST00000543637 ZNF76P36508 570 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms