RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 NR1D1P20393 614 aa12.4□□□□□ -0.42
CDH4-201ENST00000543233 SKOR1P84550 965 aa12.4□□□□□ -0.42
CDH4-201ENST00000543233 MYBPC3Q14896 1274 aa12.4□□□□□ -0.42
CDH4-201ENST00000543233 FAM196AQ6ZSG2 479 aa12.4□□□□□ -0.42
CDH4-201ENST00000543233 RASGRP4Q8TDF6 673 aa12.4□□□□□ -0.42
CDH4-201ENST00000543233 DCP1AQ9NPI6 582 aaPredicted RBP12.4□□□□□ -0.42
CDH4-201ENST00000543233 PPP6R2O75170 966 aa12.4□□□□□ -0.42
CDH4-201ENST00000543233 NAT1P18440 290 aa12.4□□□□□ -0.42
CDH4-201ENST00000543233 PCK1P35558 622 aa12.4□□□□□ -0.42
CDH4-201ENST00000543233 RASA3Q14644 834 aa12.4□□□□□ -0.42
CDH4-201ENST00000543233 SEC23AQ15436 765 aa12.4□□□□□ -0.42
CDH4-201ENST00000543233 NUGGCQ68CJ6 796 aa12.4□□□□□ -0.42
CDH4-201ENST00000543233 RASGRP2Q7LDG7 609 aa12.4□□□□□ -0.42
CDH4-201ENST00000543233 HOOK3Q86VS8 718 aa12.4□□□□□ -0.42
CDH4-201ENST00000543233 SMYD4Q8IYR2 804 aaPredicted RBP12.4□□□□□ -0.42
CDH4-201ENST00000543233 CACNA2D3Q8IZS8 1091 aa12.4□□□□□ -0.42
CDH4-201ENST00000543233 C17orf50Q8WW18 174 aa12.4□□□□□ -0.42
CDH4-201ENST00000543233 GPKOWQ92917 476 aaPredicted RBP eCLIP12.4□□□□□ -0.42
CDH4-201ENST00000543233 BPIFA3Q9BQP9 254 aa12.4□□□□□ -0.42
CDH4-201ENST00000543233 CRNKL1Q9BZJ0 848 aaKnown RBP12.4□□□□□ -0.42
CDH4-201ENST00000543233 NARFQ9UHQ1 456 aa12.4□□□□□ -0.42
CDH4-201ENST00000543233 FAM184BQ9ULE4 1060 aa12.4□□□□□ -0.42
CDH4-201ENST00000543233 ADAMTS3O15072 1205 aa12.4□□□□□ -0.43
CDH4-201ENST00000543233 PFDN1O60925 122 aa12.4□□□□□ -0.43
CDH4-201ENST00000543233 GJA8P48165 433 aa12.4□□□□□ -0.43
CDH4-201ENST00000543233 SFSWAPQ12872 951 aaKnown RBP12.4□□□□□ -0.43
CDH4-201ENST00000543233 BARGINQ6ZT62 677 aa12.4□□□□□ -0.43
CDH4-201ENST00000543233 SEPT14Q6ZU15 432 aa12.4□□□□□ -0.43
CDH4-201ENST00000543233 TMEM110Q86TL2 294 aa12.4□□□□□ -0.43
CDH4-201ENST00000543233 ELOA2Q8IYF1 753 aaPredicted RBP12.4□□□□□ -0.43
CDH4-201ENST00000543233 CCDC170Q8IYT3 715 aa12.4□□□□□ -0.43
CDH4-201ENST00000543233 GALNT8Q9NY28 637 aa12.4□□□□□ -0.43
CDH4-201ENST00000543233 STX8Q9UNK0 236 aa12.4□□□□□ -0.43
CDH4-201ENST00000543233 AKR1B15C9JRZ8 316 aaPredicted RBP12.39□□□□□ -0.43
CDH4-201ENST00000543233 C2orf54Q08AI8 447 aa12.39□□□□□ -0.43
CDH4-201ENST00000543233 CCNI2Q6ZMN8 369 aaPredicted RBP12.39□□□□□ -0.43
CDH4-201ENST00000543233 PIK3AP1Q6ZUJ8 805 aa12.39□□□□□ -0.43
CDH4-201ENST00000543233 HPSEQ9Y251 543 aa12.39□□□□□ -0.43
CDH4-201ENST00000543233 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.39□□□□□ -0.43
CDH4-201ENST00000543233 STXBP3O00186 592 aa12.39□□□□□ -0.43
CDH4-201ENST00000543233 XBP1P17861 261 aa12.39□□□□□ -0.43
CDH4-201ENST00000543233 BMP6P22004 513 aa12.39□□□□□ -0.43
CDH4-201ENST00000543233 EIF4BP23588 611 aaKnown RBP12.39□□□□□ -0.43
CDH4-201ENST00000543233 NLRP5P59047 1200 aa12.39□□□□□ -0.43
CDH4-201ENST00000543233 RILPL1Q5EBL4 403 aa12.39□□□□□ -0.43
CDH4-201ENST00000543233 MAPKAPK5Q8IW41 473 aa12.39□□□□□ -0.43
CDH4-201ENST00000543233 USP17L3A6NCW0 530 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 USP17L4A6NCW7 530 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 TRIM75PA6NK02 468 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 MAP3K13O43283 966 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 RPS6KA4O75676 772 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 GOLGA8HP0CJ92 632 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 MCM7P33993 719 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 TFAP4Q01664 338 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 XRCC4Q13426 336 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 PRPF4BQ13523 1007 aaKnown RBP12.38□□□□□ -0.43
CDH4-201ENST00000543233 POSTNQ15063 836 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 PKN1Q16512 942 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 SFMBT2Q5VUG0 894 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 USP17L1Q7RTZ2 530 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 FBXO33Q7Z6M2 555 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 SRBD1Q8N5C6 995 aaKnown RBP12.38□□□□□ -0.43
CDH4-201ENST00000543233 TGFBRAP1Q8WUH2 860 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 MAIP1Q8WWC4 291 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 QTRT2Q9H974 415 aaKnown RBP12.38□□□□□ -0.43
CDH4-201ENST00000543233 MKNK2Q9HBH9 465 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 FBXO2Q9UK22 296 aaPredicted RBP12.38□□□□□ -0.43
CDH4-201ENST00000543233 IKBKBO14920 756 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 ZNF24P17028 368 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 ALDH3A1P30838 453 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 KRT2P35908 639 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 PLIN2Q99541 437 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 NYXQ9GZU5 481 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 PREBQ9HCU5 417 aa12.38□□□□□ -0.43
CDH4-201ENST00000543233 BAZ2AQ9UIF9 1905 aaKnown RBP12.38□□□□□ -0.43
CDH4-201ENST00000543233 F8W031 263 aaPredicted RBP12.37□□□□□ -0.43
CDH4-201ENST00000543233 ABL2P42684 1182 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 TROAPQ12815 778 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 CPLX4Q7Z7G2 160 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 SH3RF3Q8TEJ3 882 aaPredicted RBP12.37□□□□□ -0.43
CDH4-201ENST00000543233 PCMTD2Q9NV79 361 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 INTS13Q9NVM9 706 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 MYH2Q9UKX2 1941 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 STK36Q9NRP7 1315 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 PTPREP23469 700 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 SLC7A5Q01650 507 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 FMR1Q06787 632 aaKnown RBP eCLIP12.37□□□□□ -0.43
CDH4-201ENST00000543233 TRAPPC3LQ5T215 181 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 MAATS1Q7Z4T9 603 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 TSEN2Q8NCE0 465 aaKnown RBP12.37□□□□□ -0.43
CDH4-201ENST00000543233 TRIM7Q9C029 511 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 BLZF1Q9H2G9 400 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 FOXP1Q9H334 677 aaPredicted RBP12.37□□□□□ -0.43
CDH4-201ENST00000543233 SLC5A4Q9NY91 659 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 BZW2Q9Y6E2 419 aaKnown RBP12.37□□□□□ -0.43
CDH4-201ENST00000543233 AHDC1Q5TGY3 1603 aaPredicted RBP12.37□□□□□ -0.43
CDH4-201ENST00000543233 ANKRD36CQ5JPF3 1778 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 RTL9Q8NET4 1388 aa12.37□□□□□ -0.43
CDH4-201ENST00000543233 LDHBP07195 334 aaKnown RBP12.37□□□□□ -0.43
CDH4-201ENST00000543233 MDH1P40925 334 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms